RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 ENAHQ8N8S7 591 aaPredicted RBP15.83■□□□□ 0.12
SGCA-203ENST00000502555 GPRC5DQ9NZD1 345 aa15.83■□□□□ 0.12
SGCA-203ENST00000502555 NAP1L2Q9ULW6 460 aaPredicted RBP15.83■□□□□ 0.12
SGCA-203ENST00000502555 SMC3Q9UQE7 1217 aa15.83■□□□□ 0.12
SGCA-203ENST00000502555 NID2Q14112 1375 aa15.83■□□□□ 0.12
SGCA-203ENST00000502555 PLIN4Q96Q06 1357 aa15.83■□□□□ 0.12
SGCA-203ENST00000502555 SHTN1A0MZ66 631 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 DDTLA6NHG4 134 aaPredicted RBP15.82■□□□□ 0.12
SGCA-203ENST00000502555 TSPY3P0CV98 308 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 TSPY8P0CW00 308 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 SCRN1Q12765 414 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 STK3Q13188 491 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 TNFAIP1Q13829 316 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 KIF4BQ2VIQ3 1234 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 FAM47AQ5JRC9 791 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 SH3BP5LQ7L8J4 393 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 METTL16Q86W50 562 aaKnown RBP15.82■□□□□ 0.12
SGCA-203ENST00000502555 FOXP4Q8IVH2 680 aaPredicted RBP15.82■□□□□ 0.12
SGCA-203ENST00000502555 ZSCAN29Q8IWY8 852 aaPredicted RBP15.82■□□□□ 0.12
SGCA-203ENST00000502555 ZKSCAN3Q9BRR0 538 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 VEZTQ9HBM0 779 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 HPS5Q9UPZ3 1129 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 SLC12A7Q9Y666 1083 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 SBF1O95248 1867 aa15.82■□□□□ 0.12
SGCA-203ENST00000502555 CNTNAP1P78357 1384 aa15.81■□□□□ 0.12
SGCA-203ENST00000502555 TCP10L2B9ZVM9 353 aa15.81■□□□□ 0.12
SGCA-203ENST00000502555 ZBTB43O43298 467 aa15.81■□□□□ 0.12
SGCA-203ENST00000502555 TNNI2P48788 182 aa15.81■□□□□ 0.12
SGCA-203ENST00000502555 NBPF9Q3BBW0 867 aa15.81■□□□□ 0.12
SGCA-203ENST00000502555 IFIT1BQ5T764 474 aaKnown RBP15.81■□□□□ 0.12
SGCA-203ENST00000502555 DGKHQ86XP1 1220 aa15.81■□□□□ 0.12
SGCA-203ENST00000502555 CRACR2BQ8N4Y2 399 aaPredicted RBP15.81■□□□□ 0.12
SGCA-203ENST00000502555 NEDD1Q8NHV4 660 aa15.81■□□□□ 0.12
SGCA-203ENST00000502555 ANKS1AQ92625 1134 aa15.81■□□□□ 0.12
SGCA-203ENST00000502555 CCDC17Q96LX7 622 aa15.81■□□□□ 0.12
SGCA-203ENST00000502555 TRIM34Q9BYJ4 488 aa15.81■□□□□ 0.12
SGCA-203ENST00000502555 SHMT1P34896 483 aa15.8■□□□□ 0.12
SGCA-203ENST00000502555 METAP2P50579 478 aaKnown RBP eCLIP15.8■□□□□ 0.12
SGCA-203ENST00000502555 NUCB2P80303 420 aa15.8■□□□□ 0.12
SGCA-203ENST00000502555 CSRNP1Q96S65 589 aa15.8■□□□□ 0.12
SGCA-203ENST00000502555 SENP2Q9HC62 589 aa15.8■□□□□ 0.12
SGCA-203ENST00000502555 HERC5Q9UII4 1024 aaKnown RBP15.8■□□□□ 0.12
SGCA-203ENST00000502555 DDAH1O94760 285 aa15.79■□□□□ 0.12
SGCA-203ENST00000502555 EGFRP00533 1210 aa15.79■□□□□ 0.12
SGCA-203ENST00000502555 CALM1P0DP23 149 aa15.79■□□□□ 0.12
SGCA-203ENST00000502555 CALM2P0DP24 149 aa15.79■□□□□ 0.12
SGCA-203ENST00000502555 CALM3P0DP25 149 aa15.79■□□□□ 0.12
SGCA-203ENST00000502555 PDIA4P13667 645 aaKnown RBP15.79■□□□□ 0.12
SGCA-203ENST00000502555 HMGN5P82970 282 aaKnown RBP15.79■□□□□ 0.12
SGCA-203ENST00000502555 PPP2R5BQ15173 497 aa15.79■□□□□ 0.12
SGCA-203ENST00000502555 TBC1D10BQ4KMP7 808 aaPredicted RBP15.79■□□□□ 0.12
SGCA-203ENST00000502555 PPP4R3BQ5MIZ7 849 aa15.79■□□□□ 0.12
SGCA-203ENST00000502555 CPLX2Q6PUV4 134 aaKnown RBP15.79■□□□□ 0.12
SGCA-203ENST00000502555 SAMD7Q7Z3H4 446 aa15.79■□□□□ 0.12
SGCA-203ENST00000502555 CATIPQ7Z7H3 387 aa15.79■□□□□ 0.12
SGCA-203ENST00000502555 MICU3Q86XE3 530 aa15.79■□□□□ 0.12
SGCA-203ENST00000502555 ZNF654Q8IZM8 581 aa15.79■□□□□ 0.12
SGCA-203ENST00000502555 IL17RBQ9NRM6 502 aa15.79■□□□□ 0.12
SGCA-203ENST00000502555 CCDC196A0A1B0GTZ2 297 aa15.78■□□□□ 0.12
SGCA-203ENST00000502555 GOLGA8AA7E2F4 631 aa15.78■□□□□ 0.12
SGCA-203ENST00000502555 CDKL5O76039 1030 aa15.78■□□□□ 0.12
SGCA-203ENST00000502555 GJB2P29033 226 aa15.78■□□□□ 0.12
SGCA-203ENST00000502555 LMOD1P29536 600 aaPredicted RBP15.78■□□□□ 0.12
SGCA-203ENST00000502555 NOVP48745 357 aa15.78■□□□□ 0.12
SGCA-203ENST00000502555 CCT2P78371 535 aaKnown RBP15.78■□□□□ 0.12
SGCA-203ENST00000502555 RBM26Q5T8P6 1007 aaKnown RBP15.78■□□□□ 0.12
SGCA-203ENST00000502555 RCSD1Q6JBY9 416 aa15.78■□□□□ 0.12
SGCA-203ENST00000502555 TATDN1Q6P1N9 297 aa15.78■□□□□ 0.12
SGCA-203ENST00000502555 NSUN7Q8NE18 718 aaKnown RBP15.78■□□□□ 0.12
SGCA-203ENST00000502555 SMARCC2Q8TAQ2 1214 aa15.78■□□□□ 0.12
SGCA-203ENST00000502555 DNAJC18Q9H819 358 aa15.78■□□□□ 0.12
SGCA-203ENST00000502555 NCOA5Q9HCD5 579 aaKnown RBP15.78■□□□□ 0.12
SGCA-203ENST00000502555 KIF3AQ9Y496 699 aa15.78■□□□□ 0.12
SGCA-203ENST00000502555 PTPDC1A2A3K4 754 aa15.77■□□□□ 0.12
SGCA-203ENST00000502555 CPLX1O14810 134 aa15.77■□□□□ 0.12
SGCA-203ENST00000502555 NMT2O60551 498 aa15.77■□□□□ 0.12
SGCA-203ENST00000502555 DDNO94850 711 aaPredicted RBP15.77■□□□□ 0.12
SGCA-203ENST00000502555 PDCP20941 246 aa15.77■□□□□ 0.12
SGCA-203ENST00000502555 DPY19L2Q6NUT2 758 aa15.77■□□□□ 0.12
SGCA-203ENST00000502555 APOBEC3FQ8IUX4 373 aaKnown RBP15.77■□□□□ 0.12
SGCA-203ENST00000502555 L3MBTL3Q96JM7 780 aaPredicted RBP15.77■□□□□ 0.12
SGCA-203ENST00000502555 KAT14Q9H8E8 782 aa15.77■□□□□ 0.12
SGCA-203ENST00000502555 SIPA1L1O43166 1804 aa15.76■□□□□ 0.11
SGCA-203ENST00000502555 IGKV6D-41A0A0C4DH26 115 aa15.76■□□□□ 0.11
SGCA-203ENST00000502555 TBC1D12O60347 775 aa15.76■□□□□ 0.11
SGCA-203ENST00000502555 CTDNEP1O95476 244 aa15.76■□□□□ 0.11
SGCA-203ENST00000502555 AKR1B1P15121 316 aa15.76■□□□□ 0.11
SGCA-203ENST00000502555 RASA3Q14644 834 aa15.76■□□□□ 0.11
SGCA-203ENST00000502555 RAB3GAP1Q15042 981 aa15.76■□□□□ 0.11
SGCA-203ENST00000502555 RTN1Q16799 776 aa15.76■□□□□ 0.11
SGCA-203ENST00000502555 TRPM4Q8TD43 1214 aa15.76■□□□□ 0.11
SGCA-203ENST00000502555 MAP3K14Q99558 947 aa15.76■□□□□ 0.11
SGCA-203ENST00000502555 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.76■□□□□ 0.11
SGCA-203ENST00000502555 TMEM39BQ9GZU3 492 aa15.76■□□□□ 0.11
SGCA-203ENST00000502555 ADARB2Q9NS39 739 aaKnown RBP15.76■□□□□ 0.11
SGCA-203ENST00000502555 PGAP2Q9UHJ9 254 aa15.76■□□□□ 0.11
SGCA-203ENST00000502555 JAK2O60674 1132 aa15.75■□□□□ 0.11
SGCA-203ENST00000502555 TOP1P11387 765 aaKnown RBP15.75■□□□□ 0.11
SGCA-203ENST00000502555 EPS15P42566 896 aa15.75■□□□□ 0.11
SGCA-203ENST00000502555 TROAPQ12815 778 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms