RNA–Protein interactions for RNA: ENST00000502495.1

SCLT1-203, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 1,811 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-203ENST00000502495 KCNQ5Q9NR82 932 aa4.43□□□□□ -1.7
SCLT1-203ENST00000502495 RAD18Q9NS91 495 aa4.43□□□□□ -1.7
SCLT1-203ENST00000502495 KRT82Q9NSB4 513 aa4.43□□□□□ -1.7
SCLT1-203ENST00000502495 PCDHA4Q9UN74 947 aa4.43□□□□□ -1.7
SCLT1-203ENST00000502495 LAMC3Q9Y6N6 1575 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 PPM1GO15355 546 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-203ENST00000502495 ZNF862O60290 1169 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 BPNT1O95861 308 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 DLGAP3O95886 979 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 ZNF865P0CJ78 1059 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-203ENST00000502495 CANXP27824 592 aaKnown RBP4.42□□□□□ -1.7
SCLT1-203ENST00000502495 APOBRQ0VD83 1088 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 SCARA3Q6AZY7 606 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 LILRA6Q6PI73 481 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 PAOXQ6QHF9 649 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 FAM196AQ6ZSG2 479 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 CCDC84Q86UT8 332 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-203ENST00000502495 SLC43A3Q8NBI5 491 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 FBXO27Q8NI29 283 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 NKD1Q969G9 470 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 WDR89Q96FK6 387 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-203ENST00000502495 RUSC1Q9BVN2 902 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 PPP1R1BQ9UD71 204 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-203ENST00000502495 CRKP46108 304 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 ARID5AQ03989 594 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 MPP2Q14168 576 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 SEZ6Q53EL9 994 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 EXOSC6Q5RKV6 272 aaKnown RBP4.42□□□□□ -1.7
SCLT1-203ENST00000502495 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-203ENST00000502495 BHLHE22Q8NFJ8 381 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-203ENST00000502495 SREK1Q8WXA9 508 aaKnown RBP4.42□□□□□ -1.7
SCLT1-203ENST00000502495 DRC1Q96MC2 740 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 TANGO6Q9C0B7 1094 aa4.42□□□□□ -1.7
SCLT1-203ENST00000502495 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-203ENST00000502495 FAM221AA4D161 298 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 B8ZZF3 427 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 AOC2O75106 756 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 CILPO75339 1184 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 SLFN14P0C7P3 912 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 ATF4P18848 351 aaPredicted RBP4.41□□□□□ -1.7
SCLT1-203ENST00000502495 MCM4P33991 863 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 SF3A1Q15459 793 aaKnown RBP4.41□□□□□ -1.7
SCLT1-203ENST00000502495 CWF19L2Q2TBE0 894 aaKnown RBP4.41□□□□□ -1.7
SCLT1-203ENST00000502495 AKAP4Q5JQC9 854 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 RASGRP4Q8TDF6 673 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 TMEM40Q8WWA1 233 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 SPATA32Q96LK8 384 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 WDR18Q9BV38 432 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 CACNA2D2Q9NY47 1150 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 PRKAG2Q9UGJ0 569 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 EFR3BQ9Y2G0 817 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 PDS5BQ9NTI5 1447 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 ROBO2Q9HCK4 1378 aa4.41□□□□□ -1.7
SCLT1-203ENST00000502495 MEGF11A6BM72 1044 aa4.4□□□□□ -1.7
SCLT1-203ENST00000502495 DCDC2CA8MYV0 355 aa4.4□□□□□ -1.7
SCLT1-203ENST00000502495 NASPP49321 788 aaPredicted RBP4.4□□□□□ -1.7
SCLT1-203ENST00000502495 CDK8P49336 464 aa4.4□□□□□ -1.7
SCLT1-203ENST00000502495 RPL6Q02878 288 aaKnown RBP4.4□□□□□ -1.7
SCLT1-203ENST00000502495 INPP5AQ14642 412 aa4.4□□□□□ -1.7
SCLT1-203ENST00000502495 KIF4BQ2VIQ3 1234 aa4.4□□□□□ -1.7
SCLT1-203ENST00000502495 SGO2Q562F6 1265 aa4.4□□□□□ -1.7
SCLT1-203ENST00000502495 WIPI1Q5MNZ9 446 aaPredicted RBP4.4□□□□□ -1.7
SCLT1-203ENST00000502495 NUTM2GQ5VZR2 741 aa4.4□□□□□ -1.7
SCLT1-203ENST00000502495 ELMO3Q96BJ8 720 aa4.4□□□□□ -1.7
SCLT1-203ENST00000502495 PLPPR2Q96GM1 343 aa4.4□□□□□ -1.7
SCLT1-203ENST00000502495 TOX2Q96NM4 488 aa4.4□□□□□ -1.7
SCLT1-203ENST00000502495 GINM1Q9NU53 330 aa4.4□□□□□ -1.7
SCLT1-203ENST00000502495 CSADQ9Y600 493 aa4.4□□□□□ -1.7
SCLT1-203ENST00000502495 CARMIL2Q6F5E8 1435 aa4.4□□□□□ -1.7
SCLT1-203ENST00000502495 FAM95CA0A1B0GW59 222 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 SMARCA5O60264 1052 aaPredicted RBP4.39□□□□□ -1.71
SCLT1-203ENST00000502495 ATP2B1P20020 1258 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 NFKBIBQ15653 356 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 LRFN4Q6PJG9 635 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 HDXQ7Z353 690 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 REC114Q7Z4M0 266 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 C12orf40Q86WS4 652 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 SLITRK4Q8IW52 837 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 C12orf50Q8NA57 414 aaPredicted RBP4.39□□□□□ -1.71
SCLT1-203ENST00000502495 ZSCAN18Q8TBC5 510 aaPredicted RBP4.39□□□□□ -1.71
SCLT1-203ENST00000502495 FAM84AQ96KN4 292 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.39□□□□□ -1.71
SCLT1-203ENST00000502495 LRRC3Q9BY71 257 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 TMPRSS13Q9BYE2 586 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 CYP4F12Q9HCS2 524 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 BRMS1Q9HCU9 246 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 PICK1Q9NRD5 415 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 PRAMEF27A3QJZ7 478 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 GRIN3BO60391 1043 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 SSBP05455 408 aaKnown RBP eCLIP4.39□□□□□ -1.71
SCLT1-203ENST00000502495 PLCL1Q15111 1095 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 DUSP27Q5VZP5 1158 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 GK5Q6ZS86 529 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 ATG4DQ86TL0 474 aaPredicted RBP4.39□□□□□ -1.71
SCLT1-203ENST00000502495 CPLX3Q8WVH0 158 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 SEC16BQ96JE7 1060 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 GMLQ99445 158 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 AP4E1Q9UPM8 1137 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 SNCAIPQ9Y6H5 919 aa4.39□□□□□ -1.71
SCLT1-203ENST00000502495 PRDM2Q13029 1718 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms