RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 CDC5LQ99459 802 aaKnown RBP8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 NACAP1Q9BZK3 213 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 RBM28Q9NW13 759 aaKnown RBP8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 ZNF446Q9NWS9 450 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 TRMT112Q9UI30 125 aaKnown RBP8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 PARP3Q9Y6F1 533 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 EFCAB8A8MWE9 144 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 DDAH1O94760 285 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 MARCKSP29966 332 aaPredicted RBP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 SART3Q15020 963 aaKnown RBP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 PKN1Q16512 942 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 MFSD6Q6ZSS7 791 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 DZIP3Q86Y13 1208 aaKnown RBP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 DIS3L2Q8IYB7 885 aaKnown RBP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 TRIM22Q8IYM9 498 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 CNNM3Q8NE01 707 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 RIOK1Q9BRS2 568 aaKnown RBP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 NAP1L2Q9ULW6 460 aaPredicted RBP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 THRAP3Q9Y2W1 955 aaKnown RBP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 NHSQ6T4R5 1651 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 IFIT3O14879 490 aaKnown RBP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 SLFN14P0C7P3 912 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 CBX1P83916 185 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 TUBB2AQ13885 445 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 WTAPQ15007 396 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 MICU3Q86XE3 530 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 LCORLQ8N3X6 602 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 FERMT2Q96AC1 680 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 KIFC2Q96AC6 838 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 PYM1Q9BRP8 204 aaKnown RBP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 TUBB2BQ9BVA1 445 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 ROBO3Q96MS0 1386 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 BAZ2AQ9UIF9 1905 aaKnown RBP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 IDH1O75874 414 aaKnown RBP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 SAFBQ15424 915 aaKnown RBP eCLIP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 NPY5RQ15761 445 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 RSRC2Q7L4I2 434 aaKnown RBP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 NUTM2AQ8IVF1 878 aaPredicted RBP8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 ZNF654Q8IZM8 581 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 MAGEB6Q8N7X4 407 aa8.27□□□□□ -1.09
LYSMD3-203ENST00000500869 ORC4O43929 436 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 CALM1P0DP23 149 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 CALM2P0DP24 149 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 CALM3P0DP25 149 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 LMOD1P29536 600 aaPredicted RBP8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 GUCY1A2P33402 732 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 TRAPPC10P48553 1259 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 MAP3K9P80192 1104 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 PPARAQ07869 468 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 SPECC1LQ69YQ0 1117 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 FANCBQ8NB91 859 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 CCDC51Q96ER9 411 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 CLIC6Q96NY7 704 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 SLC26A6Q9BXS9 759 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 FANCLQ9NW38 375 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 LY75O60449 1722 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 TOP1P11387 765 aaKnown RBP8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 ELF2Q15723 593 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 CCDC152Q4G0S7 254 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 SUSD4Q5VX71 490 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 UTP14AQ9BVJ6 771 aaKnown RBP8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 PPP2R2CQ9Y2T4 447 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 FHOD1Q9Y613 1164 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 LRRC37AA6NMS7 1700 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 TUBB4BP68371 445 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 CTDSPL2Q05D32 466 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 FMR1Q06787 632 aaKnown RBP eCLIP8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 DPYDQ12882 1025 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 NAA30Q147X3 362 aaPredicted RBP8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 SF3B3Q15393 1217 aaKnown RBP8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 SYT10Q6XYQ8 523 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 GSDMAQ96QA5 445 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 ARMT1Q9H993 441 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 CCDC87Q9NVE4 849 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 MRFAP1Q9Y605 127 aa8.26□□□□□ -1.09
LYSMD3-203ENST00000500869 C10orf71Q711Q0 1435 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 LRRC10BA6NIK2 292 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 BTBD18B2RXH4 712 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 BIN1O00499 593 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 PRR29P0C7W0 189 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 E2F4Q16254 413 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 TAF3Q5VWG9 929 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 SMARCE1Q969G3 411 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 IRS2Q9Y4H2 1338 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 TAF1LQ8IZX4 1826 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 QSER1Q2KHR3 1735 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 TMEM232C9JQI7 657 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 UBE4AQ14139 1066 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 BMS1Q14692 1282 aaKnown RBP8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 SPATA1Q5VX52 437 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 NFXL1Q6ZNB6 911 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 ANKS1AQ92625 1134 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 TRMT1Q9NXH9 659 aaKnown RBP8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 RAI14Q9P0K7 980 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 SERTAD1Q9UHV2 236 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 CNTNAP5Q8WYK1 1306 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 GPTP24298 496 aa8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 ATP2C1P98194 919 aaPredicted RBP8.25□□□□□ -1.09
LYSMD3-203ENST00000500869 TERF2Q15554 542 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms