RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 PPP1R12CQ9BZL4 782 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 TMX4Q9H1E5 349 aaPredicted RBP8.31□□□□□ -1.08
MED28-202ENST00000499786 IL25Q9H293 177 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 STK32BQ9NY57 414 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 CTNNA3Q9UI47 895 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 PALD1Q9ULE6 856 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 DOCK2Q92608 1830 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 MAST3O60307 1309 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 MAST2Q6P0Q8 1798 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 SLC27A2O14975 620 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 TIMP2P16035 220 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 BAG6P46379 1132 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 FGD1P98174 961 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 ANKRD1Q15327 319 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 ZNF827Q17R98 1081 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 MAP7D1Q3KQU3 841 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 PRR5LQ6MZQ0 368 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 BLOC1S2Q6QNY1 142 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 NOL8Q76FK4 1167 aaKnown RBP8.3□□□□□ -1.08
MED28-202ENST00000499786 TMC4Q7Z404 712 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 AMIGO3Q86WK7 504 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 PLPP7Q8NBV4 271 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 CELF1Q92879 486 aaKnown RBP8.3□□□□□ -1.08
MED28-202ENST00000499786 IRX2Q9BZI1 471 aaPredicted RBP8.3□□□□□ -1.08
MED28-202ENST00000499786 UPF3BQ9BZI7 483 aaKnown RBP8.3□□□□□ -1.08
MED28-202ENST00000499786 TM6SF1Q9BZW5 370 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 CWC22Q9HCG8 908 aaKnown RBP8.3□□□□□ -1.08
MED28-202ENST00000499786 TMPRSS4Q9NRS4 437 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 PDRG1Q9NUG6 133 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 ANKIB1Q9P2G1 1089 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 TFIP11Q9UBB9 837 aaKnown RBP8.3□□□□□ -1.08
MED28-202ENST00000499786 DENND2AQ9ULE3 1009 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 PARP3Q9Y6F1 533 aa8.3□□□□□ -1.08
MED28-202ENST00000499786 XDHP47989 1333 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 QSER1Q2KHR3 1735 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 AKAP11Q9UKA4 1901 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 PALM3A6NDB9 673 aaPredicted RBP8.29□□□□□ -1.08
MED28-202ENST00000499786 FAM187AA6NFU0 413 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 ATP9BO43861 1147 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 HMGB1P09429 215 aaKnown RBP8.29□□□□□ -1.08
MED28-202ENST00000499786 SMCPP49901 116 aaPredicted RBP8.29□□□□□ -1.08
MED28-202ENST00000499786 RASGRF1Q13972 1273 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 SCARF1Q14162 830 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 UBE3CQ15386 1083 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 IMMTQ16891 758 aaKnown RBP8.29□□□□□ -1.08
MED28-202ENST00000499786 SLC9C2Q5TAH2 1124 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 VPS53Q5VIR6 699 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 PI16Q6UXB8 463 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 CCDC129Q6ZRS4 1044 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 ZNF804AQ7Z570 1209 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 AIDAQ96BJ3 306 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 ZSCAN31Q96LW9 406 aaPredicted RBP8.29□□□□□ -1.08
MED28-202ENST00000499786 GBP4Q96PP9 640 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 ANTXR1Q9H6X2 564 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 SH2B1Q9NRF2 756 aaPredicted RBP8.29□□□□□ -1.08
MED28-202ENST00000499786 LRP2BPQ9P2M1 347 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 MINPP1Q9UNW1 487 aa8.29□□□□□ -1.08
MED28-202ENST00000499786 RPAP1Q9BWH6 1393 aaPredicted RBP8.28□□□□□ -1.08
MED28-202ENST00000499786 GOLGA6L22H0YM25 854 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 M0R2C6 588 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 POLRMTO00411 1230 aaKnown RBP8.28□□□□□ -1.08
MED28-202ENST00000499786 GPAA1O43292 621 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 PDE6AP16499 860 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 GNAT2P19087 354 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 PTMSP20962 102 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 ADD2P35612 726 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 ERVK-9P63128 1117 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 NUCB2P80303 420 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 NECTIN1Q15223 517 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 RUFY3Q7L099 469 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 CRIPAKQ8N1N5 446 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 ZGPATQ8N5A5 531 aaKnown RBP8.28□□□□□ -1.08
MED28-202ENST00000499786 ZNF784Q8NCA9 323 aaPredicted RBP8.28□□□□□ -1.08
MED28-202ENST00000499786 KCNB2Q92953 911 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 ITPKCQ96DU7 683 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 TMX3Q96JJ7 454 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 SEC62Q99442 399 aaKnown RBP8.28□□□□□ -1.08
MED28-202ENST00000499786 RAI14Q9P0K7 980 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 LEMD3Q9Y2U8 911 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.28□□□□□ -1.08
MED28-202ENST00000499786 MAFBQ9Y5Q3 323 aaPredicted RBP8.28□□□□□ -1.08
MED28-202ENST00000499786 TAF1P21675 1872 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 ZNF804BA4D1E1 1349 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 PDS5AQ29RF7 1337 aaKnown RBP8.28□□□□□ -1.08
MED28-202ENST00000499786 ZNF532Q9HCE3 1301 aa8.28□□□□□ -1.08
MED28-202ENST00000499786 NRXN2Q9P2S2 1712 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 LZTS3O60299 673 aaPredicted RBP8.27□□□□□ -1.09
MED28-202ENST00000499786 APPP05067 770 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 CYP2E1P05181 493 aaPredicted RBP8.27□□□□□ -1.09
MED28-202ENST00000499786 HSPD1P10809 573 aaKnown RBP8.27□□□□□ -1.09
MED28-202ENST00000499786 SKIP12755 728 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 TM4SF1P30408 202 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 HIBADHP31937 336 aaKnown RBP8.27□□□□□ -1.09
MED28-202ENST00000499786 ADD1P35611 737 aaKnown RBP8.27□□□□□ -1.09
MED28-202ENST00000499786 PDE6BP35913 854 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 GYG1P46976 350 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 SCTRP47872 440 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 WDR4P57081 412 aaKnown RBP8.27□□□□□ -1.09
MED28-202ENST00000499786 RAB15P59190 212 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 DDR1Q08345 913 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms