RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 MYH3P11055 1940 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 SOBPA7XYQ1 873 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 HMOX1P09601 288 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 CYP2B6P20813 491 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 TMEM240Q5SV17 173 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 GIGYF2Q6Y7W6 1299 aaKnown RBP6.41□□□□□ -1.38
CSTF1-207ENST00000498689 FRMD5Q7Z6J6 570 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 ANKRD13CQ8N6S4 541 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 TESK2Q96S53 571 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 PRRX2Q99811 253 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 ANKIB1Q9P2G1 1089 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 MSRAQ9UJ68 235 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 VPS9D1Q9Y2B5 631 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 IGF2RP11717 2491 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 SIP14410 1827 aa6.41□□□□□ -1.38
CSTF1-207ENST00000498689 FANCMQ8IYD8 2048 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 MYO7AQ13402 2215 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 LOC285556D6RIA3 1793 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 BTBD11A6QL63 1104 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 SNRPA1P09661 255 aaKnown RBP6.4□□□□□ -1.38
CSTF1-207ENST00000498689 NBL1P41271 181 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 TLE2Q04725 743 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 SNX17Q15036 470 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 CCL14Q16627 93 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 CFAP100Q494V2 611 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 GJC2Q5T442 439 aaPredicted RBP6.4□□□□□ -1.38
CSTF1-207ENST00000498689 STRIP1Q5VSL9 837 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 KIF6Q6ZMV9 814 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 TXNRD3Q86VQ6 643 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 KIAA2013Q8IYS2 634 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 CRACR2BQ8N4Y2 399 aaPredicted RBP6.4□□□□□ -1.38
CSTF1-207ENST00000498689 CERS5Q8N5B7 392 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 CHAMP1Q96JM3 812 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 WRNIP1Q96S55 665 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 RRP7AQ9Y3A4 280 aaKnown RBP6.4□□□□□ -1.38
CSTF1-207ENST00000498689 ATAD5Q96QE3 1844 aa6.4□□□□□ -1.38
CSTF1-207ENST00000498689 MYO3BQ8WXR4 1341 aa6.4□□□□□ -1.39
CSTF1-207ENST00000498689 RPAP1Q9BWH6 1393 aaPredicted RBP6.4□□□□□ -1.39
CSTF1-207ENST00000498689 MYO10Q9HD67 2058 aa6.4□□□□□ -1.39
CSTF1-207ENST00000498689 ZNFX1Q9P2E3 1918 aaKnown RBP6.39□□□□□ -1.39
CSTF1-207ENST00000498689 TMEM221A6NGB7 291 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 GOLGA8CPA6NN73 597 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 F8W031 263 aaPredicted RBP6.39□□□□□ -1.39
CSTF1-207ENST00000498689 M0R296 226 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 ACRP10323 421 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 MYL6BP14649 208 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 IRS1P35568 1242 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 COL9A3Q14050 684 aaPredicted RBP6.39□□□□□ -1.39
CSTF1-207ENST00000498689 PUM1Q14671 1186 aaKnown RBP eCLIP6.39□□□□□ -1.39
CSTF1-207ENST00000498689 RAB30Q15771 203 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 PARP10Q53GL7 1025 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 PPP2R2DQ66LE6 453 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 PTCRAQ6ISU1 281 aaPredicted RBP6.39□□□□□ -1.39
CSTF1-207ENST00000498689 BMP8AQ7Z5Y6 402 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 SPRED2Q7Z698 418 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 OXER1Q8TDS5 423 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 SEC31BQ9NQW1 1179 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 FREM2Q5SZK8 3169 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 COL11A1P12107 1806 aaPredicted RBP6.39□□□□□ -1.39
CSTF1-207ENST00000498689 DOCK1Q14185 1865 aa6.39□□□□□ -1.39
CSTF1-207ENST00000498689 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.38□□□□□ -1.39
CSTF1-207ENST00000498689 GRXCR2A6NFK2 248 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 TCP10L2B9ZVM9 353 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 GTPBP6O43824 516 aaPredicted RBP6.38□□□□□ -1.39
CSTF1-207ENST00000498689 RAG1P15918 1043 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 INPP5BP32019 993 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 IL13P35225 146 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 RPS8P62241 208 aaKnown RBP6.38□□□□□ -1.39
CSTF1-207ENST00000498689 ZP2Q05996 745 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 PPATQ06203 517 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 LEXMQ3ZCV2 418 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 PPP1R15BQ5SWA1 713 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 TTLL5Q6EMB2 1281 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 FERMT2Q96AC1 680 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 UBE2ZQ9H832 354 aaPredicted RBP6.38□□□□□ -1.39
CSTF1-207ENST00000498689 DLL3Q9NYJ7 618 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 DOCK2Q92608 1830 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 ZNF236Q9UL36 1845 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 DLG5Q8TDM6 1919 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 CFAP46Q8IYW2 2715 aa6.38□□□□□ -1.39
CSTF1-207ENST00000498689 DOPEY1Q5JWR5 2465 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 DNM1LO00429 736 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 KIAA0355O15063 1070 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 PEX10O60683 326 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 ARHGEF15O94989 841 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 CLTBP09497 229 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 KCNA5P22460 613 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 PTPREP23469 700 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 GTF2IP78347 998 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 ZNF365Q70YC5 407 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 NLRP10Q86W26 655 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 SUGP1Q8IWZ8 645 aaKnown RBP6.37□□□□□ -1.39
CSTF1-207ENST00000498689 FBXL6Q8N531 539 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 EDAQ92838 391 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 NKD2Q969F2 451 aaPredicted RBP6.37□□□□□ -1.39
CSTF1-207ENST00000498689 CARD11Q9BXL7 1154 aa6.37□□□□□ -1.39
CSTF1-207ENST00000498689 ZNF70Q9UC06 446 aaPredicted RBP6.37□□□□□ -1.39
CSTF1-207ENST00000498689 TRMT112Q9UI30 125 aaKnown RBP6.37□□□□□ -1.39
CSTF1-207ENST00000498689 COL12A1Q99715 3063 aa6.36□□□□□ -1.39
CSTF1-207ENST00000498689 MYO1BO43795 1136 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms