RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 BACE1P56817 501 aa22.65■■□□□ 1.22
PRKCB-209ENST00000498058 AS3MTQ9HBK9 375 aa22.65■■□□□ 1.22
PRKCB-209ENST00000498058 GJD2Q9UKL4 321 aa22.65■■□□□ 1.22
PRKCB-209ENST00000498058 SGPL1O95470 568 aa22.64■■□□□ 1.21
PRKCB-209ENST00000498058 ASNSP08243 561 aa22.64■■□□□ 1.21
PRKCB-209ENST00000498058 GCLCP48506 637 aaPredicted RBP22.64■■□□□ 1.21
PRKCB-209ENST00000498058 POTEEQ6S8J3 1075 aa22.64■■□□□ 1.21
PRKCB-209ENST00000498058 MAGEB6Q8N7X4 407 aa22.64■■□□□ 1.21
PRKCB-209ENST00000498058 P2RX7Q99572 595 aaKnown RBP22.64■■□□□ 1.21
PRKCB-209ENST00000498058 TAOK2Q9UL54 1235 aa22.64■■□□□ 1.21
PRKCB-209ENST00000498058 ZBTB21Q9ULJ3 1066 aa22.64■■□□□ 1.21
PRKCB-209ENST00000498058 AACSQ86V21 672 aa22.63■■□□□ 1.21
PRKCB-209ENST00000498058 CRACR2BQ8N4Y2 399 aaPredicted RBP22.63■■□□□ 1.21
PRKCB-209ENST00000498058 DPF3Q92784 378 aa22.63■■□□□ 1.21
PRKCB-209ENST00000498058 COA7Q96BR5 231 aa22.63■■□□□ 1.21
PRKCB-209ENST00000498058 TXNRD2Q9NNW7 524 aa22.63■■□□□ 1.21
PRKCB-209ENST00000498058 IL1RAPL2Q9NP60 686 aa22.63■■□□□ 1.21
PRKCB-209ENST00000498058 IGSF3O75054 1194 aa22.62■■□□□ 1.21
PRKCB-209ENST00000498058 TRIM32Q13049 653 aa22.62■■□□□ 1.21
PRKCB-209ENST00000498058 PABPC4Q13310 644 aaKnown RBP eCLIP22.62■■□□□ 1.21
PRKCB-209ENST00000498058 DEFB118Q96PH6 123 aa22.62■■□□□ 1.21
PRKCB-209ENST00000498058 PAK6Q9NQU5 681 aaPredicted RBP22.62■■□□□ 1.21
PRKCB-209ENST00000498058 MORF4L1Q9UBU8 362 aa22.62■■□□□ 1.21
PRKCB-209ENST00000498058 TRIOBPQ9H2D6 2365 aa22.62■■□□□ 1.21
PRKCB-209ENST00000498058 FARP2O94887 1054 aaPredicted RBP22.61■■□□□ 1.21
PRKCB-209ENST00000498058 HOXA7P31268 230 aaPredicted RBP22.61■■□□□ 1.21
PRKCB-209ENST00000498058 EMILIN3Q9NT22 766 aa22.61■■□□□ 1.21
PRKCB-209ENST00000498058 ALPK3Q96L96 1907 aa22.61■■□□□ 1.21
PRKCB-209ENST00000498058 EVX2Q03828 476 aa22.6■■□□□ 1.21
PRKCB-209ENST00000498058 TATDN1Q6P1N9 297 aa22.6■■□□□ 1.21
PRKCB-209ENST00000498058 SIRT2Q8IXJ6 389 aa22.6■■□□□ 1.21
PRKCB-209ENST00000498058 DDX60LQ5H9U9 1706 aaKnown RBP22.6■■□□□ 1.21
PRKCB-209ENST00000498058 C19orf81C9J6K1 198 aa22.59■■□□□ 1.21
PRKCB-209ENST00000498058 USP17L10C9JJH3 530 aa22.59■■□□□ 1.21
PRKCB-209ENST00000498058 GH2P01242 217 aa22.59■■□□□ 1.21
PRKCB-209ENST00000498058 Q3C1V9 767 aa22.59■■□□□ 1.21
PRKCB-209ENST00000498058 CHRDL2Q6WN34 429 aa22.59■■□□□ 1.21
PRKCB-209ENST00000498058 RHPN1Q8TCX5 695 aa22.59■■□□□ 1.21
PRKCB-209ENST00000498058 RIOK1Q9BRS2 568 aaKnown RBP22.59■■□□□ 1.21
PRKCB-209ENST00000498058 CRISPLD2Q9H0B8 497 aa22.59■■□□□ 1.21
PRKCB-209ENST00000498058 TMOD4Q9NZQ9 345 aa22.59■■□□□ 1.21
PRKCB-209ENST00000498058 RBPJLQ9UBG7 517 aa22.59■■□□□ 1.21
PRKCB-209ENST00000498058 HLA-DOAP06340 250 aa22.58■■□□□ 1.21
PRKCB-209ENST00000498058 USP5P45974 858 aa22.58■■□□□ 1.21
PRKCB-209ENST00000498058 HERVK_113P62684 666 aa22.58■■□□□ 1.21
PRKCB-209ENST00000498058 IRX3P78415 501 aaPredicted RBP22.58■■□□□ 1.21
PRKCB-209ENST00000498058 ERC1Q8IUD2 1116 aa22.58■■□□□ 1.21
PRKCB-209ENST00000498058 TRIM34Q9BYJ4 488 aa22.58■■□□□ 1.21
PRKCB-209ENST00000498058 GINM1Q9NU53 330 aa22.58■■□□□ 1.21
PRKCB-209ENST00000498058 TFRCP02786 760 aaKnown RBP22.57■■□□□ 1.2
PRKCB-209ENST00000498058 DIS3LQ8TF46 1054 aaKnown RBP22.57■■□□□ 1.2
PRKCB-209ENST00000498058 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.57■■□□□ 1.2
PRKCB-209ENST00000498058 PLCD1P51178 756 aa22.56■■□□□ 1.2
PRKCB-209ENST00000498058 MAP3K12Q12852 859 aa22.56■■□□□ 1.2
PRKCB-209ENST00000498058 TRIB2Q92519 343 aa22.56■■□□□ 1.2
PRKCB-209ENST00000498058 HTATIP2Q9BUP3 242 aa22.56■■□□□ 1.2
PRKCB-209ENST00000498058 EHD4Q9H223 541 aa22.56■■□□□ 1.2
PRKCB-209ENST00000498058 RBM27Q9P2N5 1060 aaKnown RBP22.56■■□□□ 1.2
PRKCB-209ENST00000498058 NAV1Q8NEY1 1877 aa22.56■■□□□ 1.2
PRKCB-209ENST00000498058 APBB1O00213 710 aa22.55■■□□□ 1.2
PRKCB-209ENST00000498058 HMGCRP04035 888 aa22.55■■□□□ 1.2
PRKCB-209ENST00000498058 CYP2B6P20813 491 aa22.55■■□□□ 1.2
PRKCB-209ENST00000498058 GUCY1A2P33402 732 aa22.55■■□□□ 1.2
PRKCB-209ENST00000498058 ACER1Q8TDN7 264 aa22.55■■□□□ 1.2
PRKCB-209ENST00000498058 EDC3Q96F86 508 aaKnown RBP22.55■■□□□ 1.2
PRKCB-209ENST00000498058 PORCNQ9H237 461 aa22.55■■□□□ 1.2
PRKCB-209ENST00000498058 PRO3102Q9H379 93 aa22.55■■□□□ 1.2
PRKCB-209ENST00000498058 SERPINB13Q9UIV8 391 aa22.55■■□□□ 1.2
PRKCB-209ENST00000498058 COG6Q9Y2V7 657 aa22.55■■□□□ 1.2
PRKCB-209ENST00000498058 PDE6AP16499 860 aa22.54■■□□□ 1.2
PRKCB-209ENST00000498058 SHMT1P34896 483 aa22.54■■□□□ 1.2
PRKCB-209ENST00000498058 MNX1P50219 401 aaPredicted RBP22.54■■□□□ 1.2
PRKCB-209ENST00000498058 ZYXQ15942 572 aaKnown RBP22.54■■□□□ 1.2
PRKCB-209ENST00000498058 SLFNL1Q499Z3 407 aa22.54■■□□□ 1.2
PRKCB-209ENST00000498058 USP17L2Q6R6M4 530 aa22.54■■□□□ 1.2
PRKCB-209ENST00000498058 GPRC5AQ8NFJ5 357 aa22.54■■□□□ 1.2
PRKCB-209ENST00000498058 PAWRQ96IZ0 340 aaKnown RBP22.54■■□□□ 1.2
PRKCB-209ENST00000498058 ZBTB40Q9NUA8 1239 aa22.54■■□□□ 1.2
PRKCB-209ENST00000498058 RANBP2P49792 3224 aaKnown RBP22.54■■□□□ 1.2
PRKCB-209ENST00000498058 TCRBV5S4A2TA0A5A2 114 aa22.53■■□□□ 1.2
PRKCB-209ENST00000498058 CNMDO75829 334 aa22.53■■□□□ 1.2
PRKCB-209ENST00000498058 ERVK-9P63128 1117 aa22.53■■□□□ 1.2
PRKCB-209ENST00000498058 ERVK-24P63145 666 aa22.53■■□□□ 1.2
PRKCB-209ENST00000498058 USP6NLQ92738 828 aa22.53■■□□□ 1.2
PRKCB-209ENST00000498058 C12orf42Q96LP6 360 aa22.53■■□□□ 1.2
PRKCB-209ENST00000498058 GABPAQ06546 454 aa22.52■■□□□ 1.2
PRKCB-209ENST00000498058 CERKLQ49MI3 558 aaPredicted RBP22.52■■□□□ 1.2
PRKCB-209ENST00000498058 HSP90AB4PQ58FF6 505 aa22.52■■□□□ 1.2
PRKCB-209ENST00000498058 CERS3Q8IU89 383 aa22.52■■□□□ 1.2
PRKCB-209ENST00000498058 PAGR1Q9BTK6 254 aa22.52■■□□□ 1.2
PRKCB-209ENST00000498058 RPTORQ8N122 1335 aa22.52■■□□□ 1.2
PRKCB-209ENST00000498058 MAGEB6P1A0A0J9YX57 407 aa22.51■■□□□ 1.19
PRKCB-209ENST00000498058 GOLIM4O00461 696 aa22.51■■□□□ 1.19
PRKCB-209ENST00000498058 RAB3GAP1Q15042 981 aa22.51■■□□□ 1.19
PRKCB-209ENST00000498058 ABCB5Q2M3G0 1257 aa22.51■■□□□ 1.19
PRKCB-209ENST00000498058 SLC9C2Q5TAH2 1124 aa22.51■■□□□ 1.19
PRKCB-209ENST00000498058 MAP3K21Q5TCX8 1036 aa22.51■■□□□ 1.19
PRKCB-209ENST00000498058 TTC6Q86TZ1 520 aa22.51■■□□□ 1.19
PRKCB-209ENST00000498058 RPAP2Q8IXW5 612 aaPredicted RBP22.51■■□□□ 1.19
PRKCB-209ENST00000498058 KIF1BPQ96EK5 621 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms