RNA–Protein interactions for RNA: ENST00000498038.1

HLA-DPB1-217, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-217ENST00000498038 RASAL3Q86YV0 1011 aa23.33■■□□□ 1.33
HLA-DPB1-217ENST00000498038 ZNF444Q8N0Y2 327 aaPredicted RBP23.33■■□□□ 1.33
HLA-DPB1-217ENST00000498038 OPTNQ96CV9 577 aa23.33■■□□□ 1.33
HLA-DPB1-217ENST00000498038 CABP5Q9NP86 173 aa23.33■■□□□ 1.33
HLA-DPB1-217ENST00000498038 INCENPQ9NQS7 918 aa23.33■■□□□ 1.33
HLA-DPB1-217ENST00000498038 RBM8AQ9Y5S9 174 aaKnown RBP23.33■■□□□ 1.33
HLA-DPB1-217ENST00000498038 GH2P01242 217 aa23.32■■□□□ 1.32
HLA-DPB1-217ENST00000498038 ECE1P42892 770 aa23.32■■□□□ 1.32
HLA-DPB1-217ENST00000498038 SHROOM1Q2M3G4 852 aaPredicted RBP23.32■■□□□ 1.32
HLA-DPB1-217ENST00000498038 ERO1BQ86YB8 467 aa23.32■■□□□ 1.32
HLA-DPB1-217ENST00000498038 CNKSR2Q8WXI2 1034 aa23.32■■□□□ 1.32
HLA-DPB1-217ENST00000498038 CAPNS2Q96L46 248 aa23.32■■□□□ 1.32
HLA-DPB1-217ENST00000498038 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.32■■□□□ 1.32
HLA-DPB1-217ENST00000498038 REC8O95072 547 aa23.31■■□□□ 1.32
HLA-DPB1-217ENST00000498038 ASNSP08243 561 aa23.31■■□□□ 1.32
HLA-DPB1-217ENST00000498038 SLC10A3P09131 477 aa23.31■■□□□ 1.32
HLA-DPB1-217ENST00000498038 PTPRAP18433 802 aa23.31■■□□□ 1.32
HLA-DPB1-217ENST00000498038 RASA1P20936 1047 aa23.31■■□□□ 1.32
HLA-DPB1-217ENST00000498038 MKRN3Q13064 507 aaKnown RBP23.31■■□□□ 1.32
HLA-DPB1-217ENST00000498038 OTUD5Q96G74 571 aa23.31■■□□□ 1.32
HLA-DPB1-217ENST00000498038 WNK4Q96J92 1243 aa23.31■■□□□ 1.32
HLA-DPB1-217ENST00000498038 CCDC17Q96LX7 622 aa23.31■■□□□ 1.32
HLA-DPB1-217ENST00000498038 TOMM22Q9NS69 142 aa23.31■■□□□ 1.32
HLA-DPB1-217ENST00000498038 SPDYE5A6NIY4 337 aa23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 FAM155AB1AL88 458 aaPredicted RBP23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 AKR1B1P15121 316 aa23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 VEGFBP49765 207 aa23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 AKNAD1Q5T1N1 836 aa23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 SPRYD7Q5W111 196 aa23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 MFSD6Q6ZSS7 791 aa23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 TBC1D10CQ8IV04 446 aa23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 NBPF3Q9H094 633 aa23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 GINM1Q9NU53 330 aa23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 ZBTB21Q9ULJ3 1066 aa23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 TACC3Q9Y6A5 838 aa23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 ZHX2Q9Y6X8 837 aa23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 WDR33Q9C0J8 1336 aaKnown RBP23.3■■□□□ 1.32
HLA-DPB1-217ENST00000498038 USP17L5A8MUK1 530 aa23.29■■□□□ 1.32
HLA-DPB1-217ENST00000498038 PPATQ06203 517 aa23.29■■□□□ 1.32
HLA-DPB1-217ENST00000498038 RAB3GAP1Q15042 981 aa23.29■■□□□ 1.32
HLA-DPB1-217ENST00000498038 RRP12Q5JTH9 1297 aaKnown RBP23.29■■□□□ 1.32
HLA-DPB1-217ENST00000498038 CCDC84Q86UT8 332 aaPredicted RBP23.29■■□□□ 1.32
HLA-DPB1-217ENST00000498038 STAG1Q8WVM7 1258 aa23.29■■□□□ 1.32
HLA-DPB1-217ENST00000498038 RNF41Q9H4P4 317 aaPredicted RBP23.29■■□□□ 1.32
HLA-DPB1-217ENST00000498038 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.29■■□□□ 1.32
HLA-DPB1-217ENST00000498038 CYP21A2P08686 494 aa23.28■■□□□ 1.32
HLA-DPB1-217ENST00000498038 GJA5P36382 358 aa23.28■■□□□ 1.32
HLA-DPB1-217ENST00000498038 DOCK1Q14185 1865 aa23.28■■□□□ 1.32
HLA-DPB1-217ENST00000498038 ORC4O43929 436 aa23.27■■□□□ 1.32
HLA-DPB1-217ENST00000498038 RANBP6O60518 1105 aaKnown RBP23.27■■□□□ 1.32
HLA-DPB1-217ENST00000498038 FGRP09769 529 aa23.27■■□□□ 1.32
HLA-DPB1-217ENST00000498038 ZBTB48P10074 688 aaPredicted RBP23.27■■□□□ 1.32
HLA-DPB1-217ENST00000498038 PPIL2Q13356 520 aa23.27■■□□□ 1.32
HLA-DPB1-217ENST00000498038 SEPT2Q15019 361 aa23.27■■□□□ 1.32
HLA-DPB1-217ENST00000498038 NECTIN1Q15223 517 aa23.27■■□□□ 1.32
HLA-DPB1-217ENST00000498038 FAM47AQ5JRC9 791 aa23.27■■□□□ 1.32
HLA-DPB1-217ENST00000498038 TMEM179Q6ZVK1 233 aa23.27■■□□□ 1.32
HLA-DPB1-217ENST00000498038 AOC2O75106 756 aa23.26■■□□□ 1.31
HLA-DPB1-217ENST00000498038 TSPY3P0CV98 308 aa23.26■■□□□ 1.31
HLA-DPB1-217ENST00000498038 TSPY8P0CW00 308 aa23.26■■□□□ 1.31
HLA-DPB1-217ENST00000498038 PCP11498 1178 aaKnown RBP23.26■■□□□ 1.31
HLA-DPB1-217ENST00000498038 TFAP4Q01664 338 aa23.26■■□□□ 1.31
HLA-DPB1-217ENST00000498038 NOGQ13253 232 aa23.26■■□□□ 1.31
HLA-DPB1-217ENST00000498038 CREB3L3Q68CJ9 461 aa23.26■■□□□ 1.31
HLA-DPB1-217ENST00000498038 AS3MTQ9HBK9 375 aa23.26■■□□□ 1.31
HLA-DPB1-217ENST00000498038 ATAD5Q96QE3 1844 aa23.25■■□□□ 1.31
HLA-DPB1-217ENST00000498038 TSPY2A6NKD2 308 aa23.25■■□□□ 1.31
HLA-DPB1-217ENST00000498038 IRF6O14896 467 aa23.25■■□□□ 1.31
HLA-DPB1-217ENST00000498038 SLC27A2O14975 620 aa23.25■■□□□ 1.31
HLA-DPB1-217ENST00000498038 GUCY1A2P33402 732 aa23.25■■□□□ 1.31
HLA-DPB1-217ENST00000498038 DNAJC5GQ8N7S2 189 aa23.25■■□□□ 1.31
HLA-DPB1-217ENST00000498038 TBC1D2Q9BYX2 928 aa23.25■■□□□ 1.31
HLA-DPB1-217ENST00000498038 AFG3L2Q9Y4W6 797 aa23.25■■□□□ 1.31
HLA-DPB1-217ENST00000498038 MYH8P13535 1937 aa23.25■■□□□ 1.31
HLA-DPB1-217ENST00000498038 LAMA4Q16363 1823 aa23.24■■□□□ 1.31
HLA-DPB1-217ENST00000498038 TRIM75PA6NK02 468 aa23.24■■□□□ 1.31
HLA-DPB1-217ENST00000498038 KIF23Q02241 960 aaPredicted RBP23.24■■□□□ 1.31
HLA-DPB1-217ENST00000498038 SPP2Q13103 211 aa23.24■■□□□ 1.31
HLA-DPB1-217ENST00000498038 RNF20Q5VTR2 975 aa23.24■■□□□ 1.31
HLA-DPB1-217ENST00000498038 ZNF280CQ8ND82 737 aa23.24■■□□□ 1.31
HLA-DPB1-217ENST00000498038 ZIC5Q96T25 663 aa23.24■■□□□ 1.31
HLA-DPB1-217ENST00000498038 TAF6LQ9Y6J9 622 aa23.24■■□□□ 1.31
HLA-DPB1-217ENST00000498038 NEDD4P46934 1319 aa23.24■■□□□ 1.31
HLA-DPB1-217ENST00000498038 E7EWF7 191 aa23.23■■□□□ 1.31
HLA-DPB1-217ENST00000498038 EIF5BO60841 1220 aaKnown RBP23.23■■□□□ 1.31
HLA-DPB1-217ENST00000498038 C8orf34Q49A92 452 aa23.23■■□□□ 1.31
HLA-DPB1-217ENST00000498038 NEDD1Q8NHV4 660 aa23.23■■□□□ 1.31
HLA-DPB1-217ENST00000498038 ESR2Q92731 530 aa23.23■■□□□ 1.31
HLA-DPB1-217ENST00000498038 WDR18Q9BV38 432 aa23.23■■□□□ 1.31
HLA-DPB1-217ENST00000498038 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.23■■□□□ 1.31
HLA-DPB1-217ENST00000498038 USP26Q9BXU7 913 aa23.23■■□□□ 1.31
HLA-DPB1-217ENST00000498038 KRT23Q9C075 422 aa23.23■■□□□ 1.31
HLA-DPB1-217ENST00000498038 CNNM2Q9H8M5 875 aa23.23■■□□□ 1.31
HLA-DPB1-217ENST00000498038 KANSL2Q9H9L4 492 aa23.23■■□□□ 1.31
HLA-DPB1-217ENST00000498038 CXCL11O14625 94 aa23.22■■□□□ 1.31
HLA-DPB1-217ENST00000498038 GTF2A2P52657 109 aa23.22■■□□□ 1.31
HLA-DPB1-217ENST00000498038 TRDNQ13061 729 aa23.22■■□□□ 1.31
HLA-DPB1-217ENST00000498038 SNAPC2Q13487 334 aa23.22■■□□□ 1.31
HLA-DPB1-217ENST00000498038 CLEC10AQ8IUN9 316 aa23.22■■□□□ 1.31
HLA-DPB1-217ENST00000498038 KCNH4Q9UQ05 1017 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms