RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PABPC4Q13310 644 aaKnown RBP eCLIP18.47■□□□□ 0.55
NUP50-219ENST00000497960 SLFNL1Q499Z3 407 aa18.47■□□□□ 0.55
NUP50-219ENST00000497960 TSHZ3Q63HK5 1081 aa18.47■□□□□ 0.55
NUP50-219ENST00000497960 TATDN1Q6P1N9 297 aa18.47■□□□□ 0.55
NUP50-219ENST00000497960 SDR42E1Q8WUS8 393 aa18.47■□□□□ 0.55
NUP50-219ENST00000497960 DDRGK1Q96HY6 314 aa18.47■□□□□ 0.55
NUP50-219ENST00000497960 DCP1AQ9NPI6 582 aaPredicted RBP18.47■□□□□ 0.55
NUP50-219ENST00000497960 TMOD4Q9NZQ9 345 aa18.47■□□□□ 0.55
NUP50-219ENST00000497960 TTC41PQ6P2S7 1318 aa18.47■□□□□ 0.55
NUP50-219ENST00000497960 PHIPQ8WWQ0 1821 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 C19orf81C9J6K1 198 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 GH2P01242 217 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 HOXD10P28358 340 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 PSMC4P43686 418 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 BACE1P56817 501 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 JAG1P78504 1218 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 MLLT1Q03111 559 aaPredicted RBP18.46■□□□□ 0.55
NUP50-219ENST00000497960 MTMR2Q13614 643 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 CERKLQ49MI3 558 aaPredicted RBP18.46■□□□□ 0.55
NUP50-219ENST00000497960 SH3D19Q5HYK7 790 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 TREML2Q5T2D2 321 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 KBTBD3Q8NAB2 608 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 GCC1Q96CN9 775 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 ARHGAP39Q9C0H5 1083 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 ATP8A2Q9NTI2 1148 aa18.46■□□□□ 0.55
NUP50-219ENST00000497960 PTPRFP10586 1907 aa18.45■□□□□ 0.54
NUP50-219ENST00000497960 ATAD5Q96QE3 1844 aa18.45■□□□□ 0.54
NUP50-219ENST00000497960 USP17L10C9JJH3 530 aa18.45■□□□□ 0.54
NUP50-219ENST00000497960 ECM2O94769 699 aaPredicted RBP18.45■□□□□ 0.54
NUP50-219ENST00000497960 FMNL1O95466 1100 aaPredicted RBP18.45■□□□□ 0.54
NUP50-219ENST00000497960 BCRP11274 1271 aa18.45■□□□□ 0.54
NUP50-219ENST00000497960 OSBPP22059 807 aa18.45■□□□□ 0.54
NUP50-219ENST00000497960 PRMT2P55345 433 aa18.45■□□□□ 0.54
NUP50-219ENST00000497960 LRRFIP1Q32MZ4 808 aaKnown RBP18.45■□□□□ 0.54
NUP50-219ENST00000497960 ANKRD45Q5TZF3 282 aa18.45■□□□□ 0.54
NUP50-219ENST00000497960 AMOTL1Q8IY63 956 aa18.45■□□□□ 0.54
NUP50-219ENST00000497960 CABP5Q9NP86 173 aa18.45■□□□□ 0.54
NUP50-219ENST00000497960 PRKAB2O43741 272 aa18.44■□□□□ 0.54
NUP50-219ENST00000497960 GLRX3O76003 335 aaKnown RBP18.44■□□□□ 0.54
NUP50-219ENST00000497960 ABCB5Q2M3G0 1257 aa18.44■□□□□ 0.54
NUP50-219ENST00000497960 SHROOM1Q2M3G4 852 aaPredicted RBP18.44■□□□□ 0.54
NUP50-219ENST00000497960 TAOK2Q9UL54 1235 aa18.44■□□□□ 0.54
NUP50-219ENST00000497960 PTCH2Q9Y6C5 1203 aa18.44■□□□□ 0.54
NUP50-219ENST00000497960 CHGBP05060 677 aa18.43■□□□□ 0.54
NUP50-219ENST00000497960 ZFYP08048 801 aaPredicted RBP18.43■□□□□ 0.54
NUP50-219ENST00000497960 MX1P20591 662 aa18.43■□□□□ 0.54
NUP50-219ENST00000497960 SHMT1P34896 483 aa18.43■□□□□ 0.54
NUP50-219ENST00000497960 FCGRTP55899 365 aa18.43■□□□□ 0.54
NUP50-219ENST00000497960 GABPAQ06546 454 aa18.43■□□□□ 0.54
NUP50-219ENST00000497960 RAB3GAP1Q15042 981 aa18.43■□□□□ 0.54
NUP50-219ENST00000497960 SLC9C1Q4G0N8 1177 aa18.43■□□□□ 0.54
NUP50-219ENST00000497960 NBPF11Q86T75 865 aa18.43■□□□□ 0.54
NUP50-219ENST00000497960 PUS7LQ9H0K6 701 aaKnown RBP18.43■□□□□ 0.54
NUP50-219ENST00000497960 SLC4A4Q9Y6R1 1079 aa18.43■□□□□ 0.54
NUP50-219ENST00000497960 RNF113AO15541 343 aaKnown RBP18.42■□□□□ 0.54
NUP50-219ENST00000497960 IGHDP01880 384 aa18.42■□□□□ 0.54
NUP50-219ENST00000497960 GCLCP48506 637 aaPredicted RBP18.42■□□□□ 0.54
NUP50-219ENST00000497960 IRX3P78415 501 aaPredicted RBP18.42■□□□□ 0.54
NUP50-219ENST00000497960 USP17L2Q6R6M4 530 aa18.42■□□□□ 0.54
NUP50-219ENST00000497960 OTUD7AQ8TE49 926 aaPredicted RBP18.42■□□□□ 0.54
NUP50-219ENST00000497960 APPBP2Q92624 585 aa18.42■□□□□ 0.54
NUP50-219ENST00000497960 ARMC5Q96C12 935 aa18.42■□□□□ 0.54
NUP50-219ENST00000497960 TRIM47Q96LD4 638 aa18.42■□□□□ 0.54
NUP50-219ENST00000497960 FEZ1Q99689 392 aa18.42■□□□□ 0.54
NUP50-219ENST00000497960 SRRDQ9UH36 339 aa18.42■□□□□ 0.54
NUP50-219ENST00000497960 SWAP70Q9UH65 585 aa18.42■□□□□ 0.54
NUP50-219ENST00000497960 KIAA0100Q14667 2235 aaKnown RBP18.42■□□□□ 0.54
NUP50-219ENST00000497960 NAV1Q8NEY1 1877 aa18.41■□□□□ 0.54
NUP50-219ENST00000497960 MYH7P12883 1935 aa18.41■□□□□ 0.54
NUP50-219ENST00000497960 CYP2D6P10635 497 aa18.41■□□□□ 0.54
NUP50-219ENST00000497960 CTGFP29279 349 aa18.41■□□□□ 0.54
NUP50-219ENST00000497960 ANKRD13CQ8N6S4 541 aa18.41■□□□□ 0.54
NUP50-219ENST00000497960 PI4K2BQ8TCG2 481 aa18.41■□□□□ 0.54
NUP50-219ENST00000497960 ASCC2Q9H1I8 757 aaPredicted RBP18.41■□□□□ 0.54
NUP50-219ENST00000497960 MPHOSPH10O00566 681 aaKnown RBP18.4■□□□□ 0.54
NUP50-219ENST00000497960 HOXA7P31268 230 aaPredicted RBP18.4■□□□□ 0.54
NUP50-219ENST00000497960 USP14P54578 494 aa18.4■□□□□ 0.54
NUP50-219ENST00000497960 FAM110CQ1W6H9 321 aa18.4■□□□□ 0.54
NUP50-219ENST00000497960 RAET1EQ8TD07 263 aa18.4■□□□□ 0.54
NUP50-219ENST00000497960 STRBPQ96SI9 672 aaKnown RBP18.4■□□□□ 0.54
NUP50-219ENST00000497960 USP17L12C9JPN9 530 aa18.39■□□□□ 0.53
NUP50-219ENST00000497960 USP17L21D6R901 530 aa18.39■□□□□ 0.53
NUP50-219ENST00000497960 EVX2Q03828 476 aa18.39■□□□□ 0.53
NUP50-219ENST00000497960 C12orf60Q5U649 245 aa18.39■□□□□ 0.53
NUP50-219ENST00000497960 ERICH6BQ5W0A0 696 aa18.39■□□□□ 0.53
NUP50-219ENST00000497960 SMC5Q8IY18 1101 aa18.39■□□□□ 0.53
NUP50-219ENST00000497960 OSBP2Q969R2 916 aa18.39■□□□□ 0.53
NUP50-219ENST00000497960 DYNLL2Q96FJ2 89 aa18.39■□□□□ 0.53
NUP50-219ENST00000497960 FSD1Q9BTV5 496 aa18.39■□□□□ 0.53
NUP50-219ENST00000497960 EMILIN3Q9NT22 766 aa18.39■□□□□ 0.53
NUP50-219ENST00000497960 DDX60LQ5H9U9 1706 aaKnown RBP18.39■□□□□ 0.53
NUP50-219ENST00000497960 MYPNQ86TC9 1320 aa18.39■□□□□ 0.53
NUP50-219ENST00000497960 LOC285556D6RIA3 1793 aa18.39■□□□□ 0.53
NUP50-219ENST00000497960 TNPO2O14787 897 aaKnown RBP18.38■□□□□ 0.53
NUP50-219ENST00000497960 ZYXQ15942 572 aaKnown RBP18.38■□□□□ 0.53
NUP50-219ENST00000497960 B4GALNT3Q6L9W6 998 aa18.38■□□□□ 0.53
NUP50-219ENST00000497960 SLC44A5Q8NCS7 719 aa18.38■□□□□ 0.53
NUP50-219ENST00000497960 ZNF333Q96JL9 665 aa18.38■□□□□ 0.53
NUP50-219ENST00000497960 CCDC136Q96JN2 1154 aa18.38■□□□□ 0.53
NUP50-219ENST00000497960 TMEM106CQ9BVX2 250 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms