RNA–Protein interactions for RNA: ENST00000497832.1

RNF25-206, Transcript of ring finger protein 25, human

TSL 3

Gene RNF25, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF25-206	ENST00000497832	CHD8	Q9HCK8	2581 aa		13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	ZNF521	Q96K83	1311 aa		13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	POTEB3	A0JP26	581 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	GTPBP6	O43824	516 aa	Predicted RBP	13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	LMOD3	Q0VAK6	560 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	LRRC41	Q15345	812 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	SH3D19	Q5HYK7	790 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	DUSP27	Q5VZP5	1158 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	CDC42EP5	Q6NZY7	148 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	POTEB	Q6S5H4	581 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	CCDC84	Q86UT8	332 aa	Predicted RBP	13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	PRSS33	Q8NF86	280 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	MFSD14A	Q96MC6	490 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	TOX2	Q96NM4	488 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	TBC1D2	Q9BYX2	928 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	PORCN	Q9H237	461 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	PHF24	Q9UPV7	400 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	MAP3K2	Q9Y2U5	619 aa		13.63	□□□□□ -0.23
RNF25-206	ENST00000497832	NEURL1B	A8MQ27	555 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	PEX10	O60683	326 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	HOXC6	P09630	235 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	SLC5A1	P13866	664 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	HMGCS2	P54868	508 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	CASP7	P55210	303 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	ERVK-9	P63128	1117 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	ERVK-24	P63145	666 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	FAAP100	Q0VG06	881 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	SPP2	Q13103	211 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832		Q3C1V9	767 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	ANKRD33	Q7Z3H0	272 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	ZFPM1	Q8IX07	1006 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	RBPJL	Q9UBG7	517 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	CFAP47	Q6ZTR5	3102 aa		13.62	□□□□□ -0.23
RNF25-206	ENST00000497832	DCX	O43602	365 aa		13.61	□□□□□ -0.23
RNF25-206	ENST00000497832	PQBP1	O60828	265 aa	Known RBP	13.61	□□□□□ -0.23
RNF25-206	ENST00000497832	HOXA7	P31268	230 aa	Predicted RBP	13.61	□□□□□ -0.23
RNF25-206	ENST00000497832	HERVK_113	P62684	666 aa		13.61	□□□□□ -0.23
RNF25-206	ENST00000497832	IRX3	P78415	501 aa	Predicted RBP	13.61	□□□□□ -0.23
RNF25-206	ENST00000497832	PPP2R2D	Q66LE6	453 aa		13.61	□□□□□ -0.23
RNF25-206	ENST00000497832	HFE2	Q6ZVN8	426 aa		13.61	□□□□□ -0.23
RNF25-206	ENST00000497832	ZNF280C	Q8ND82	737 aa		13.61	□□□□□ -0.23
RNF25-206	ENST00000497832	ANKS1A	Q92625	1134 aa		13.61	□□□□□ -0.23
RNF25-206	ENST00000497832	DNAH14	Q0VDD8	3507 aa		13.61	□□□□□ -0.23
RNF25-206	ENST00000497832	SEPT4	O43236	478 aa		13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	PLIN1	O60240	522 aa		13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	SLC4A2	P04920	1241 aa		13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	CYP2C19	P33261	490 aa		13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	ATP2B2	Q01814	1243 aa		13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	NEXN	Q0ZGT2	675 aa		13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	CHAF1A	Q13111	956 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	IFIT5	Q13325	482 aa	Known RBP	13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	CWF19L2	Q2TBE0	894 aa	Known RBP	13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	KSR2	Q6VAB6	950 aa		13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	ZNF365	Q70YC5	407 aa		13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	FBXO33	Q7Z6M2	555 aa		13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	CCAR1	Q8IX12	1150 aa	Known RBP	13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	TBX21	Q9UL17	535 aa		13.6	□□□□□ -0.23
RNF25-206	ENST00000497832	PTPRZ1	P23471	2315 aa	Predicted RBP	13.59	□□□□□ -0.23
RNF25-206	ENST00000497832	SLC15A5	A6NIM6	579 aa		13.59	□□□□□ -0.23
RNF25-206	ENST00000497832	ENTPD3	O75355	529 aa		13.59	□□□□□ -0.23
RNF25-206	ENST00000497832	GLRX3	O76003	335 aa	Known RBP	13.59	□□□□□ -0.23
RNF25-206	ENST00000497832	GCKR	Q14397	625 aa		13.59	□□□□□ -0.23
RNF25-206	ENST00000497832	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.59	□□□□□ -0.23
RNF25-206	ENST00000497832	PRRX2	Q99811	253 aa		13.59	□□□□□ -0.23
RNF25-206	ENST00000497832	GAK	O14976	1311 aa		13.59	□□□□□ -0.23
RNF25-206	ENST00000497832	VPS13A	Q96RL7	3174 aa		13.59	□□□□□ -0.23
RNF25-206	ENST00000497832	ZNF236	Q9UL36	1845 aa		13.58	□□□□□ -0.24
RNF25-206	ENST00000497832	DMXL1	Q9Y485	3027 aa		13.58	□□□□□ -0.24
RNF25-206	ENST00000497832	SH3BP5L	Q7L8J4	393 aa		13.58	□□□□□ -0.24
RNF25-206	ENST00000497832	MTIF3	Q9H2K0	278 aa	Known RBP	13.58	□□□□□ -0.24
RNF25-206	ENST00000497832	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.58	□□□□□ -0.24
RNF25-206	ENST00000497832	PCDHA11	Q9Y5I1	949 aa		13.58	□□□□□ -0.24
RNF25-206	ENST00000497832	MYH13	Q9UKX3	1938 aa		13.58	□□□□□ -0.24
RNF25-206	ENST00000497832	PI4KAP2	A4QPH2	592 aa		13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	DCDC2C	A8MYV0	355 aa		13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	RFXAP	O00287	272 aa		13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	MYCN	P04198	464 aa	Predicted RBP	13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	CSF2RA	P15509	400 aa		13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	PTPRE	P23469	700 aa		13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	SSTR3	P32745	418 aa	Predicted RBP	13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	ANO1	Q5XXA6	986 aa		13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	LDHAL6A	Q6ZMR3	332 aa		13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	TMEM199	Q8N511	208 aa		13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	PI4KAP1	Q8N8J0	262 aa		13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	NPLOC4	Q8TAT6	608 aa		13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	IDI2	Q9BXS1	227 aa		13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	LAS1L	Q9Y4W2	734 aa	Known RBP	13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	CACNA1H	O95180	2353 aa		13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	PLXNA3	P51805	1871 aa		13.57	□□□□□ -0.24
RNF25-206	ENST00000497832	TBC1D12	O60347	775 aa		13.56	□□□□□ -0.24
RNF25-206	ENST00000497832	SLURP2	P0DP57	97 aa		13.56	□□□□□ -0.24
RNF25-206	ENST00000497832	TMPO	P42166	694 aa	Known RBP	13.56	□□□□□ -0.24
RNF25-206	ENST00000497832	TCF15	Q12870	199 aa		13.56	□□□□□ -0.24
RNF25-206	ENST00000497832	VPS37D	Q86XT2	251 aa		13.56	□□□□□ -0.24
RNF25-206	ENST00000497832	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.56	□□□□□ -0.24
RNF25-206	ENST00000497832	USP40	Q9NVE5	1235 aa		13.56	□□□□□ -0.24
RNF25-206	ENST00000497832	RIF1	Q5UIP0	2472 aa	Known RBP	13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms