RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 GSG1L2A8MUP6 293 aa14.05□□□□□ -0.16
MRPL55-234ENST00000497758 BTBD19C9JJ37 291 aa14.05□□□□□ -0.16
MRPL55-234ENST00000497758 GH2P01242 217 aa14.05□□□□□ -0.16
MRPL55-234ENST00000497758 TAF1CQ15572 869 aaPredicted RBP14.05□□□□□ -0.16
MRPL55-234ENST00000497758 ABCB5Q2M3G0 1257 aa14.05□□□□□ -0.16
MRPL55-234ENST00000497758 COL13A1Q5TAT6 717 aaPredicted RBP14.05□□□□□ -0.16
MRPL55-234ENST00000497758 C12orf60Q5U649 245 aa14.05□□□□□ -0.16
MRPL55-234ENST00000497758 TATDN1Q6P1N9 297 aa14.05□□□□□ -0.16
MRPL55-234ENST00000497758 GADL1Q6ZQY3 521 aa14.05□□□□□ -0.16
MRPL55-234ENST00000497758 FASTKD5Q7L8L6 764 aaKnown RBP14.05□□□□□ -0.16
MRPL55-234ENST00000497758 FAM43AQ8N2R8 423 aa14.05□□□□□ -0.16
MRPL55-234ENST00000497758 ZNF280CQ8ND82 737 aa14.05□□□□□ -0.16
MRPL55-234ENST00000497758 CCDC136Q96JN2 1154 aa14.05□□□□□ -0.16
MRPL55-234ENST00000497758 ZCCHC17Q9NP64 241 aaKnown RBP14.05□□□□□ -0.16
MRPL55-234ENST00000497758 CABP5Q9NP86 173 aa14.05□□□□□ -0.16
MRPL55-234ENST00000497758 HELLSQ9NRZ9 838 aa14.05□□□□□ -0.16
MRPL55-234ENST00000497758 DIAPH3Q9NSV4 1193 aa14.05□□□□□ -0.16
MRPL55-234ENST00000497758 CYP2D7A0A087X1C5 515 aa14.04□□□□□ -0.16
MRPL55-234ENST00000497758 A0A0G2JLL6 359 aaPredicted RBP14.04□□□□□ -0.16
MRPL55-234ENST00000497758 PATL2C9JE40 543 aaKnown RBP14.04□□□□□ -0.16
MRPL55-234ENST00000497758 HIP1O00291 1037 aa14.04□□□□□ -0.16
MRPL55-234ENST00000497758 MPHOSPH10O00566 681 aaKnown RBP14.04□□□□□ -0.16
MRPL55-234ENST00000497758 SHMT1P34896 483 aa14.04□□□□□ -0.16
MRPL55-234ENST00000497758 GABPAQ06546 454 aa14.04□□□□□ -0.16
MRPL55-234ENST00000497758 SPP2Q13103 211 aa14.04□□□□□ -0.16
MRPL55-234ENST00000497758 CRHR2Q13324 411 aa14.04□□□□□ -0.16
MRPL55-234ENST00000497758 TTC22Q5TAA0 569 aa14.04□□□□□ -0.16
MRPL55-234ENST00000497758 CTR9Q6PD62 1173 aa14.04□□□□□ -0.16
MRPL55-234ENST00000497758 PRRT2Q7Z6L0 340 aaPredicted RBP14.04□□□□□ -0.16
MRPL55-234ENST00000497758 ANKRD23Q86SG2 305 aa14.04□□□□□ -0.16
MRPL55-234ENST00000497758 DYNLL2Q96FJ2 89 aa14.04□□□□□ -0.16
MRPL55-234ENST00000497758 CFHR5Q9BXR6 569 aa14.04□□□□□ -0.16
MRPL55-234ENST00000497758 ZFYVE28Q9HCC9 887 aa14.04□□□□□ -0.16
MRPL55-234ENST00000497758 MINDY4BA8MYZ0 360 aa14.03□□□□□ -0.16
MRPL55-234ENST00000497758 GPR25O00155 361 aa14.03□□□□□ -0.16
MRPL55-234ENST00000497758 PDHXO00330 501 aa14.03□□□□□ -0.16
MRPL55-234ENST00000497758 EVX2Q03828 476 aa14.03□□□□□ -0.16
MRPL55-234ENST00000497758 NMIQ13287 307 aaPredicted RBP14.03□□□□□ -0.16
MRPL55-234ENST00000497758 RAB3GAP1Q15042 981 aa14.03□□□□□ -0.16
MRPL55-234ENST00000497758 MCMDC2Q4G0Z9 681 aa14.03□□□□□ -0.16
MRPL55-234ENST00000497758 CCDC129Q6ZRS4 1044 aa14.03□□□□□ -0.16
MRPL55-234ENST00000497758 SLC44A5Q8NCS7 719 aa14.03□□□□□ -0.16
MRPL55-234ENST00000497758 FAM227BQ96M60 508 aa14.03□□□□□ -0.16
MRPL55-234ENST00000497758 WDR18Q9BV38 432 aa14.03□□□□□ -0.16
MRPL55-234ENST00000497758 NAPBQ9H115 298 aa14.03□□□□□ -0.16
MRPL55-234ENST00000497758 LAMB1P07942 1786 aa14.03□□□□□ -0.16
MRPL55-234ENST00000497758 BAZ2AQ9UIF9 1905 aaKnown RBP14.02□□□□□ -0.16
MRPL55-234ENST00000497758 A0A0D9SFI3 127 aa14.02□□□□□ -0.17
MRPL55-234ENST00000497758 SDSP20132 328 aa14.02□□□□□ -0.17
MRPL55-234ENST00000497758 MFAP1P55081 439 aaKnown RBP14.02□□□□□ -0.17
MRPL55-234ENST00000497758 JAG1P78504 1218 aa14.02□□□□□ -0.17
MRPL55-234ENST00000497758 MTMR2Q13614 643 aa14.02□□□□□ -0.17
MRPL55-234ENST00000497758 SHROOM1Q2M3G4 852 aaPredicted RBP14.02□□□□□ -0.17
MRPL55-234ENST00000497758 SBK1Q52WX2 424 aa14.02□□□□□ -0.17
MRPL55-234ENST00000497758 NOM1Q5C9Z4 860 aaKnown RBP14.02□□□□□ -0.17
MRPL55-234ENST00000497758 C16orf86Q6ZW13 317 aa14.02□□□□□ -0.17
MRPL55-234ENST00000497758 IFNL3Q8IZI9 196 aa14.02□□□□□ -0.17
MRPL55-234ENST00000497758 TNS4Q8IZW8 715 aa14.02□□□□□ -0.17
MRPL55-234ENST00000497758 PARK7Q99497 189 aaKnown RBP14.02□□□□□ -0.17
MRPL55-234ENST00000497758 FEZ1Q99689 392 aa14.02□□□□□ -0.17
MRPL55-234ENST00000497758 R3HDMLQ9H3Y0 253 aa14.02□□□□□ -0.17
MRPL55-234ENST00000497758 EPB41L4AQ9HCS5 686 aaPredicted RBP14.02□□□□□ -0.17
MRPL55-234ENST00000497758 TMOD4Q9NZQ9 345 aa14.02□□□□□ -0.17
MRPL55-234ENST00000497758 ATAD5Q96QE3 1844 aa14.01□□□□□ -0.17
MRPL55-234ENST00000497758 USP17L10C9JJH3 530 aa14.01□□□□□ -0.17
MRPL55-234ENST00000497758 FKTNO75072 461 aa14.01□□□□□ -0.17
MRPL55-234ENST00000497758 SLC3A2P08195 630 aaKnown RBP14.01□□□□□ -0.17
MRPL55-234ENST00000497758 CDK8P49336 464 aa14.01□□□□□ -0.17
MRPL55-234ENST00000497758 HMGCS2P54868 508 aa14.01□□□□□ -0.17
MRPL55-234ENST00000497758 MOGSQ13724 837 aa14.01□□□□□ -0.17
MRPL55-234ENST00000497758 PROCA1Q8NCQ7 364 aaPredicted RBP14.01□□□□□ -0.17
MRPL55-234ENST00000497758 ZNF296Q8WUU4 475 aaPredicted RBP14.01□□□□□ -0.17
MRPL55-234ENST00000497758 CCDC17Q96LX7 622 aa14.01□□□□□ -0.17
MRPL55-234ENST00000497758 MKNK2Q9HBH9 465 aa14.01□□□□□ -0.17
MRPL55-234ENST00000497758 ZNF287Q9HBT7 754 aa14.01□□□□□ -0.17
MRPL55-234ENST00000497758 CCDC171Q6TFL3 1326 aa14□□□□□ -0.17
MRPL55-234ENST00000497758 C19orf81C9J6K1 198 aa14□□□□□ -0.17
MRPL55-234ENST00000497758 GSPT1P15170 499 aaKnown RBP14□□□□□ -0.17
MRPL55-234ENST00000497758 BACE1P56817 501 aa14□□□□□ -0.17
MRPL55-234ENST00000497758 PABPC4Q13310 644 aaKnown RBP eCLIP14□□□□□ -0.179e-7■■■■■ 28.5
MRPL55-234ENST00000497758 GPAT2Q6NUI2 795 aa14□□□□□ -0.17
MRPL55-234ENST00000497758 CWC27Q6UX04 472 aaKnown RBP14□□□□□ -0.17
MRPL55-234ENST00000497758 TMEM179Q6ZVK1 233 aa14□□□□□ -0.17
MRPL55-234ENST00000497758 STK11IPQ8N1F8 1099 aa14□□□□□ -0.17
MRPL55-234ENST00000497758 AGTPBP1Q9UPW5 1226 aa14□□□□□ -0.17
MRPL55-234ENST00000497758 CASP8AP2Q9UKL3 1982 aa14□□□□□ -0.17
MRPL55-234ENST00000497758 ROBO3Q96MS0 1386 aa13.99□□□□□ -0.17
MRPL55-234ENST00000497758 SMIM22K7EJ46 135 aa13.99□□□□□ -0.17
MRPL55-234ENST00000497758 TLR2O60603 784 aa13.99□□□□□ -0.17
MRPL55-234ENST00000497758 SEPT2Q15019 361 aa13.99□□□□□ -0.17
MRPL55-234ENST00000497758 VPS53Q5VIR6 699 aa13.99□□□□□ -0.17
MRPL55-234ENST00000497758 SMCR8Q8TEV9 937 aaPredicted RBP13.99□□□□□ -0.17
MRPL55-234ENST00000497758 PNMA3Q9UL41 463 aa13.99□□□□□ -0.17
MRPL55-234ENST00000497758 SLC45A1Q9Y2W3 748 aa13.99□□□□□ -0.17
MRPL55-234ENST00000497758 AKR1B1P15121 316 aa13.98□□□□□ -0.17
MRPL55-234ENST00000497758 USP14P54578 494 aa13.98□□□□□ -0.17
MRPL55-234ENST00000497758 SP3Q02447 781 aa13.98□□□□□ -0.17
MRPL55-234ENST00000497758 PDE4BQ07343 736 aa13.98□□□□□ -0.17
MRPL55-234ENST00000497758 PPARAQ07869 468 aa13.98□□□□□ -0.17
MRPL55-234ENST00000497758 ZYXQ15942 572 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms