RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 ADH7P40394 386 aa10.32□□□□□ -0.76
VPS45-210ENST00000497638 GATA4P43694 442 aa10.32□□□□□ -0.76
VPS45-210ENST00000497638 ST5P78524 1137 aa10.32□□□□□ -0.76
VPS45-210ENST00000497638 TYRO3Q06418 890 aa10.32□□□□□ -0.76
VPS45-210ENST00000497638 DOC2BQ14184 412 aa10.32□□□□□ -0.76
VPS45-210ENST00000497638 HIF1AQ16665 826 aa10.32□□□□□ -0.76
VPS45-210ENST00000497638 MAP1SQ66K74 1059 aaPredicted RBP10.32□□□□□ -0.76
VPS45-210ENST00000497638 BHMTQ93088 406 aa10.32□□□□□ -0.76
VPS45-210ENST00000497638 DDX21Q9NR30 783 aaKnown RBP eCLIP10.32□□□□□ -0.76
VPS45-210ENST00000497638 UBR2Q8IWV8 1755 aa10.31□□□□□ -0.76
VPS45-210ENST00000497638 NPHP1O15259 732 aa10.31□□□□□ -0.76
VPS45-210ENST00000497638 FKBP4Q02790 459 aaKnown RBP eCLIP10.31□□□□□ -0.76
VPS45-210ENST00000497638 TBC1D8BQ0IIM8 1120 aa10.31□□□□□ -0.76
VPS45-210ENST00000497638 SLC39A6Q13433 755 aa10.31□□□□□ -0.76
VPS45-210ENST00000497638 SULT6B1Q6IMI4 303 aa10.31□□□□□ -0.76
VPS45-210ENST00000497638 C8orf86Q6ZUL3 223 aa10.31□□□□□ -0.76
VPS45-210ENST00000497638 GAS2L2Q8NHY3 880 aa10.31□□□□□ -0.76
VPS45-210ENST00000497638 GPR101Q96P66 508 aaPredicted RBP10.31□□□□□ -0.76
VPS45-210ENST00000497638 MAFBQ9Y5Q3 323 aaPredicted RBP10.31□□□□□ -0.76
VPS45-210ENST00000497638 RNF123Q5XPI4 1314 aa10.31□□□□□ -0.76
VPS45-210ENST00000497638 LTBP1Q14766 1721 aa10.3□□□□□ -0.76
VPS45-210ENST00000497638 TNRC18O15417 2968 aaPredicted RBP10.3□□□□□ -0.76
VPS45-210ENST00000497638 RNMTO43148 476 aaKnown RBP10.3□□□□□ -0.76
VPS45-210ENST00000497638 ALBP02768 609 aa10.3□□□□□ -0.76
VPS45-210ENST00000497638 GPC2Q8N158 579 aa10.3□□□□□ -0.76
VPS45-210ENST00000497638 MICALL1Q8N3F8 863 aa10.3□□□□□ -0.76
VPS45-210ENST00000497638 STAG2Q8N3U4 1231 aa10.3□□□□□ -0.76
VPS45-210ENST00000497638 CALR3Q96L12 384 aaKnown RBP10.3□□□□□ -0.76
VPS45-210ENST00000497638 SETDB2Q96T68 719 aa10.3□□□□□ -0.76
VPS45-210ENST00000497638 C2orf49Q9BVC5 232 aaPredicted RBP10.3□□□□□ -0.76
VPS45-210ENST00000497638 MCOLN1Q9GZU1 580 aa10.3□□□□□ -0.76
VPS45-210ENST00000497638 IGFLR1Q9H665 355 aa10.3□□□□□ -0.76
VPS45-210ENST00000497638 STARD13Q9Y3M8 1113 aa10.3□□□□□ -0.76
VPS45-210ENST00000497638 FZD9O00144 591 aa10.29□□□□□ -0.76
VPS45-210ENST00000497638 MAP2K2P36507 400 aa10.29□□□□□ -0.76
VPS45-210ENST00000497638 TRIM28Q13263 835 aaKnown RBP10.29□□□□□ -0.76
VPS45-210ENST00000497638 BTLAQ7Z6A9 289 aa10.29□□□□□ -0.76
VPS45-210ENST00000497638 RTKN2Q8IZC4 609 aa10.29□□□□□ -0.76
VPS45-210ENST00000497638 UBE2OQ9C0C9 1292 aaKnown RBP10.29□□□□□ -0.76
VPS45-210ENST00000497638 LGR6Q9HBX8 967 aa10.29□□□□□ -0.76
VPS45-210ENST00000497638 ZNF277Q9NRM2 450 aaPredicted RBP10.29□□□□□ -0.76
VPS45-210ENST00000497638 TRPM7Q96QT4 1865 aa10.29□□□□□ -0.76
VPS45-210ENST00000497638 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
VPS45-210ENST00000497638 NPR1P16066 1061 aa10.28□□□□□ -0.76
VPS45-210ENST00000497638 IL6STP40189 918 aaPredicted RBP10.28□□□□□ -0.76
VPS45-210ENST00000497638 XP32Q5T750 250 aa10.28□□□□□ -0.76
VPS45-210ENST00000497638 CYP4F22Q6NT55 531 aa10.28□□□□□ -0.76
VPS45-210ENST00000497638 NPM2Q86SE8 214 aaKnown RBP10.28□□□□□ -0.76
VPS45-210ENST00000497638 TTC5Q8N0Z6 440 aa10.28□□□□□ -0.76
VPS45-210ENST00000497638 TEX13AQ9BXU3 409 aaPredicted RBP10.28□□□□□ -0.76
VPS45-210ENST00000497638 SEMA6BQ9H3T3 888 aa10.28□□□□□ -0.76
VPS45-210ENST00000497638 CASP8AP2Q9UKL3 1982 aa10.28□□□□□ -0.76
VPS45-210ENST00000497638 BCORQ6W2J9 1755 aa10.27□□□□□ -0.77
VPS45-210ENST00000497638 LGR5O75473 907 aa10.27□□□□□ -0.77
VPS45-210ENST00000497638 CAMTA2O94983 1202 aa10.27□□□□□ -0.77
VPS45-210ENST00000497638 LMOD1P29536 600 aaPredicted RBP10.27□□□□□ -0.77
VPS45-210ENST00000497638 IARSP41252 1262 aaKnown RBP10.27□□□□□ -0.77
VPS45-210ENST00000497638 GRM1Q13255 1194 aa10.27□□□□□ -0.77
VPS45-210ENST00000497638 TMEM132AQ24JP5 1023 aa10.27□□□□□ -0.77
VPS45-210ENST00000497638 PRDM6Q9NQX0 595 aa10.27□□□□□ -0.77
VPS45-210ENST00000497638 HEG1Q9ULI3 1381 aa10.26□□□□□ -0.77
VPS45-210ENST00000497638 KLRG2A4D1S0 409 aaPredicted RBP10.26□□□□□ -0.77
VPS45-210ENST00000497638 IL13P35225 146 aa10.26□□□□□ -0.77
VPS45-210ENST00000497638 DGKZQ13574 1117 aa10.26□□□□□ -0.77
VPS45-210ENST00000497638 JDP2Q8WYK2 163 aa10.26□□□□□ -0.77
VPS45-210ENST00000497638 PNMA5Q96PV4 448 aa10.26□□□□□ -0.77
VPS45-210ENST00000497638 PPP1R12CQ9BZL4 782 aa10.26□□□□□ -0.77
VPS45-210ENST00000497638 LILRB5O75023 590 aa10.25□□□□□ -0.77
VPS45-210ENST00000497638 EIF6P56537 245 aaKnown RBP10.25□□□□□ -0.77
VPS45-210ENST00000497638 DPYDQ12882 1025 aa10.25□□□□□ -0.77
VPS45-210ENST00000497638 COL9A3Q14050 684 aaPredicted RBP10.25□□□□□ -0.77
VPS45-210ENST00000497638 CRTC2Q53ET0 693 aaPredicted RBP10.25□□□□□ -0.77
VPS45-210ENST00000497638 USP50Q70EL3 339 aaPredicted RBP10.25□□□□□ -0.77
VPS45-210ENST00000497638 NBPF5PQ86XG9 351 aaPredicted RBP10.25□□□□□ -0.77
VPS45-210ENST00000497638 HHIPL1Q96JK4 782 aa10.25□□□□□ -0.77
VPS45-210ENST00000497638 NACC1Q96RE7 527 aa10.25□□□□□ -0.77
VPS45-210ENST00000497638 PSMD1Q99460 953 aa10.25□□□□□ -0.77
VPS45-210ENST00000497638 AOC2O75106 756 aa10.24□□□□□ -0.77
VPS45-210ENST00000497638 PTK7Q13308 1070 aa10.24□□□□□ -0.77
VPS45-210ENST00000497638 RTN1Q16799 776 aa10.24□□□□□ -0.77
VPS45-210ENST00000497638 CST9Q5W186 159 aa10.24□□□□□ -0.77
VPS45-210ENST00000497638 CLEC4GQ6UXB4 293 aa10.24□□□□□ -0.77
VPS45-210ENST00000497638 MORC1Q86VD1 984 aa10.24□□□□□ -0.77
VPS45-210ENST00000497638 SYNE4Q8N205 404 aa10.24□□□□□ -0.77
VPS45-210ENST00000497638 ZNF496Q96IT1 587 aaPredicted RBP10.24□□□□□ -0.77
VPS45-210ENST00000497638 VRTNQ9H8Y1 702 aa10.24□□□□□ -0.77
VPS45-210ENST00000497638 ZNF652Q9Y2D9 606 aa10.24□□□□□ -0.77
VPS45-210ENST00000497638 SNED1Q8TER0 1413 aa10.24□□□□□ -0.77
VPS45-210ENST00000497638 NID1P14543 1247 aa10.23□□□□□ -0.77
VPS45-210ENST00000497638 ALDH1B1P30837 517 aa10.23□□□□□ -0.77
VPS45-210ENST00000497638 FMR1Q06787 632 aaKnown RBP eCLIP10.23□□□□□ -0.77
VPS45-210ENST00000497638 GRIK4Q16099 956 aa10.23□□□□□ -0.77
VPS45-210ENST00000497638 ZNF790Q6PG37 636 aa10.23□□□□□ -0.77
VPS45-210ENST00000497638 OLFM4Q6UX06 510 aa10.23□□□□□ -0.77
VPS45-210ENST00000497638 C20orf204Q6ZNR8 217 aa10.23□□□□□ -0.77
VPS45-210ENST00000497638 SAPCD2Q86UD0 394 aa10.23□□□□□ -0.77
VPS45-210ENST00000497638 USP17L15C9J2P7 530 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 USP17L10C9JJH3 530 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 USP17L13C9JLJ4 530 aa10.22□□□□□ -0.77
VPS45-210ENST00000497638 USP17L12C9JPN9 530 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms