RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 RIN3Q8TB24 985 aa6.57□□□□□ -1.36
CBX3-208ENST00000497498 MIPEPQ99797 713 aa6.57□□□□□ -1.36
CBX3-208ENST00000497498 SEMA3GQ9NS98 782 aa6.57□□□□□ -1.36
CBX3-208ENST00000497498 JAG1P78504 1218 aa6.56□□□□□ -1.36
CBX3-208ENST00000497498 SEPT6Q14141 434 aa6.56□□□□□ -1.36
CBX3-208ENST00000497498 MFSD4AQ8N468 514 aa6.56□□□□□ -1.36
CBX3-208ENST00000497498 HSPA12BQ96MM6 686 aa6.56□□□□□ -1.36
CBX3-208ENST00000497498 TPX2Q9ULW0 747 aaKnown RBP6.56□□□□□ -1.36
CBX3-208ENST00000497498 ST14Q9Y5Y6 855 aa6.56□□□□□ -1.36
CBX3-208ENST00000497498 CAPN6Q9Y6Q1 641 aa6.56□□□□□ -1.36
CBX3-208ENST00000497498 FAM155AB1AL88 458 aaPredicted RBP6.55□□□□□ -1.36
CBX3-208ENST00000497498 LMNB1P20700 586 aa6.55□□□□□ -1.36
CBX3-208ENST00000497498 ZNF648Q5T619 568 aaPredicted RBP6.55□□□□□ -1.36
CBX3-208ENST00000497498 MEI1Q5TIA1 1274 aa6.55□□□□□ -1.36
CBX3-208ENST00000497498 PRAMEF13Q5VWM6 474 aa6.55□□□□□ -1.36
CBX3-208ENST00000497498 ZNF746Q6NUN9 644 aaPredicted RBP6.55□□□□□ -1.36
CBX3-208ENST00000497498 MRPL41Q8IXM3 137 aaKnown RBP6.55□□□□□ -1.36
CBX3-208ENST00000497498 ATP13A1Q9HD20 1204 aa6.55□□□□□ -1.36
CBX3-208ENST00000497498 CTNND2Q9UQB3 1225 aa6.55□□□□□ -1.36
CBX3-208ENST00000497498 FARP2O94887 1054 aaPredicted RBP6.54□□□□□ -1.36
CBX3-208ENST00000497498 RLBP1P12271 317 aa6.54□□□□□ -1.36
CBX3-208ENST00000497498 TFE3P19532 575 aaPredicted RBP6.54□□□□□ -1.36
CBX3-208ENST00000497498 ST13P50502 369 aaKnown RBP6.54□□□□□ -1.36
CBX3-208ENST00000497498 DAB2P98082 770 aa6.54□□□□□ -1.36
CBX3-208ENST00000497498 NPAS4Q8IUM7 802 aa6.54□□□□□ -1.36
CBX3-208ENST00000497498 COX4I2Q96KJ9 171 aa6.54□□□□□ -1.36
CBX3-208ENST00000497498 NOC4LQ9BVI4 516 aaKnown RBP6.54□□□□□ -1.36
CBX3-208ENST00000497498 MIR1-1HGQ9H1L0 117 aa6.54□□□□□ -1.36
CBX3-208ENST00000497498 TJP2Q9UDY2 1190 aa6.54□□□□□ -1.36
CBX3-208ENST00000497498 PARP2Q9UGN5 583 aa6.54□□□□□ -1.36
CBX3-208ENST00000497498 MAP3K11Q16584 847 aa6.53□□□□□ -1.36
CBX3-208ENST00000497498 TSNAXIP1Q2TAA8 658 aa6.53□□□□□ -1.36
CBX3-208ENST00000497498 CDKAL1Q5VV42 579 aa6.53□□□□□ -1.36
CBX3-208ENST00000497498 DNAJC14Q6Y2X3 702 aaPredicted RBP6.53□□□□□ -1.36
CBX3-208ENST00000497498 THAP5Q7Z6K1 395 aa6.53□□□□□ -1.36
CBX3-208ENST00000497498 ZSWIM9Q86XI8 627 aa6.53□□□□□ -1.36
CBX3-208ENST00000497498 CARS2Q9HA77 564 aaKnown RBP6.53□□□□□ -1.36
CBX3-208ENST00000497498 PGRP06401 933 aa6.52□□□□□ -1.37
CBX3-208ENST00000497498 CTSHP09668 335 aa6.52□□□□□ -1.37
CBX3-208ENST00000497498 CYP7A1P22680 504 aa6.52□□□□□ -1.37
CBX3-208ENST00000497498 KIR3DL1P43629 444 aa6.52□□□□□ -1.37
CBX3-208ENST00000497498 TAF1CQ15572 869 aaPredicted RBP6.52□□□□□ -1.37
CBX3-208ENST00000497498 SLC6A19Q695T7 634 aa6.52□□□□□ -1.37
CBX3-208ENST00000497498 XAGE3Q8WTP9 111 aa6.52□□□□□ -1.37
CBX3-208ENST00000497498 C19orf73Q9NVV2 129 aa6.52□□□□□ -1.37
CBX3-208ENST00000497498 FAM53CQ9NYF3 392 aa6.52□□□□□ -1.37
CBX3-208ENST00000497498 ZNF503-AS2A6NEH8 195 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 H3BS24 57 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 CBX7O95931 251 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 AFMP43652 599 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 RPL6Q02878 288 aaKnown RBP6.51□□□□□ -1.37
CBX3-208ENST00000497498 MESP2Q0VG99 397 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 KCNMB1Q16558 191 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 FYB2Q5VWT5 728 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 TMC4Q7Z404 712 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 CDH24Q86UP0 819 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 CCDC84Q86UT8 332 aaPredicted RBP6.51□□□□□ -1.37
CBX3-208ENST00000497498 MCATQ8IVS2 390 aaKnown RBP6.51□□□□□ -1.37
CBX3-208ENST00000497498 PHC3Q8NDX5 983 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 TMEM87BQ96K49 555 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.51□□□□□ -1.37
CBX3-208ENST00000497498 ADAM30Q9UKF2 790 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 TLR6Q9Y2C9 796 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 USP31Q70CQ4 1352 aa6.51□□□□□ -1.37
CBX3-208ENST00000497498 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.5□□□□□ -1.37
CBX3-208ENST00000497498 PDE4BQ07343 736 aa6.5□□□□□ -1.37
CBX3-208ENST00000497498 TNK2Q07912 1038 aa6.5□□□□□ -1.37
CBX3-208ENST00000497498 PSMD2Q13200 908 aa6.5□□□□□ -1.37
CBX3-208ENST00000497498 FBXO33Q7Z6M2 555 aa6.5□□□□□ -1.37
CBX3-208ENST00000497498 DNAJB8Q8NHS0 232 aa6.5□□□□□ -1.37
CBX3-208ENST00000497498 PIWIL2Q8TC59 973 aaKnown RBP6.5□□□□□ -1.37
CBX3-208ENST00000497498 ACSF2Q96CM8 615 aaPredicted RBP6.5□□□□□ -1.37
CBX3-208ENST00000497498 DPH2Q9BQC3 489 aaPredicted RBP6.5□□□□□ -1.37
CBX3-208ENST00000497498 RBAK-RBAKDNI3L0D1 243 aa6.49□□□□□ -1.37
CBX3-208ENST00000497498 GDNFP39905 211 aa6.49□□□□□ -1.37
CBX3-208ENST00000497498 ETV3P41162 512 aa6.49□□□□□ -1.37
CBX3-208ENST00000497498 AEBP1Q8IUX7 1158 aa6.49□□□□□ -1.37
CBX3-208ENST00000497498 JARID2Q92833 1246 aaPredicted RBP6.49□□□□□ -1.37
CBX3-208ENST00000497498 UBE2FQ969M7 185 aa6.49□□□□□ -1.37
CBX3-208ENST00000497498 FAM221AA4D161 298 aa6.48□□□□□ -1.37
CBX3-208ENST00000497498 LRRC10BA6NIK2 292 aa6.48□□□□□ -1.37
CBX3-208ENST00000497498 DBX1A6NMT0 343 aa6.48□□□□□ -1.37
CBX3-208ENST00000497498 CILPO75339 1184 aa6.48□□□□□ -1.37
CBX3-208ENST00000497498 XPCQ01831 940 aaPredicted RBP6.48□□□□□ -1.37
CBX3-208ENST00000497498 ZNF124Q15973 351 aa6.48□□□□□ -1.37
CBX3-208ENST00000497498 KSR1Q8IVT5 923 aa6.48□□□□□ -1.37
CBX3-208ENST00000497498 BHLHE22Q8NFJ8 381 aaPredicted RBP6.48□□□□□ -1.37
CBX3-208ENST00000497498 CCDC120Q96HB5 630 aa6.48□□□□□ -1.37
CBX3-208ENST00000497498 FAM84AQ96KN4 292 aa6.48□□□□□ -1.37
CBX3-208ENST00000497498 ALPK1Q96QP1 1244 aa6.48□□□□□ -1.37
CBX3-208ENST00000497498 CEP131Q9UPN4 1083 aa6.48□□□□□ -1.37
CBX3-208ENST00000497498 GLI1P08151 1106 aa6.47□□□□□ -1.37
CBX3-208ENST00000497498 PDIA4P13667 645 aaKnown RBP6.47□□□□□ -1.37
CBX3-208ENST00000497498 LMNB2Q03252 620 aa6.47□□□□□ -1.37
CBX3-208ENST00000497498 TMEM201Q5SNT2 666 aa6.47□□□□□ -1.37
CBX3-208ENST00000497498 TMPRSS7Q7RTY8 843 aa6.47□□□□□ -1.37
CBX3-208ENST00000497498 PPP1R13LQ8WUF5 828 aa6.47□□□□□ -1.37
CBX3-208ENST00000497498 LIN37Q96GY3 246 aaPredicted RBP6.47□□□□□ -1.37
CBX3-208ENST00000497498 CRELD1Q96HD1 420 aa6.47□□□□□ -1.37
CBX3-208ENST00000497498 KIRREL1Q96J84 757 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms