RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.32■■□□□ 1.32
SCAMP3-209ENST00000497470 ALDH8A1Q9H2A2 487 aaPredicted RBP23.32■■□□□ 1.32
SCAMP3-209ENST00000497470 ASNSP08243 561 aa23.31■■□□□ 1.32
SCAMP3-209ENST00000497470 MCM5P33992 734 aa23.31■■□□□ 1.32
SCAMP3-209ENST00000497470 TMEM179Q6ZVK1 233 aa23.31■■□□□ 1.32
SCAMP3-209ENST00000497470 DHX32Q7L7V1 743 aaKnown RBP23.31■■□□□ 1.32
SCAMP3-209ENST00000497470 TTC14Q96N46 770 aa23.31■■□□□ 1.32
SCAMP3-209ENST00000497470 TACC3Q9Y6A5 838 aa23.31■■□□□ 1.32
SCAMP3-209ENST00000497470 PAPPA2Q9BXP8 1791 aa23.3■■□□□ 1.32
SCAMP3-209ENST00000497470 MAP3K9P80192 1104 aa23.3■■□□□ 1.32
SCAMP3-209ENST00000497470 EVX2Q03828 476 aa23.3■■□□□ 1.32
SCAMP3-209ENST00000497470 LDLRAD1Q5T700 205 aa23.3■■□□□ 1.32
SCAMP3-209ENST00000497470 IQCA1Q86XH1 822 aa23.3■■□□□ 1.32
SCAMP3-209ENST00000497470 ANKS1AQ92625 1134 aa23.3■■□□□ 1.32
SCAMP3-209ENST00000497470 TMEM87BQ96K49 555 aa23.3■■□□□ 1.32
SCAMP3-209ENST00000497470 CABP5Q9NP86 173 aa23.3■■□□□ 1.32
SCAMP3-209ENST00000497470 ZSWIM5Q9P217 1185 aa23.3■■□□□ 1.32
SCAMP3-209ENST00000497470 NEDD4P46934 1319 aa23.3■■□□□ 1.32
SCAMP3-209ENST00000497470 SMIM22K7EJ46 135 aa23.29■■□□□ 1.32
SCAMP3-209ENST00000497470 EXOSC10Q01780 885 aaKnown RBP23.29■■□□□ 1.32
SCAMP3-209ENST00000497470 BLOC1S2Q6QNY1 142 aa23.29■■□□□ 1.32
SCAMP3-209ENST00000497470 MIGA2Q7L4E1 593 aa23.29■■□□□ 1.32
SCAMP3-209ENST00000497470 ANKRD13AQ8IZ07 590 aa23.29■■□□□ 1.32
SCAMP3-209ENST00000497470 TMTC2Q8N394 836 aa23.29■■□□□ 1.32
SCAMP3-209ENST00000497470 SLC44A5Q8NCS7 719 aa23.29■■□□□ 1.32
SCAMP3-209ENST00000497470 KIF2CQ99661 725 aa23.29■■□□□ 1.32
SCAMP3-209ENST00000497470 KANSL2Q9H9L4 492 aa23.29■■□□□ 1.32
SCAMP3-209ENST00000497470 SCAF8Q9UPN6 1271 aaKnown RBP23.29■■□□□ 1.32
SCAMP3-209ENST00000497470 TAF6LQ9Y6J9 622 aa23.29■■□□□ 1.32
SCAMP3-209ENST00000497470 IGKV6D-41A0A0C4DH26 115 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 TSPY2A6NKD2 308 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 TSPY3P0CV98 308 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 TSPY8P0CW00 308 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 RABEP1Q15276 862 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 ABCB5Q2M3G0 1257 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 ADCK5Q3MIX3 580 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 PRAMEF18Q5VWM3 479 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 RUFY3Q7L099 469 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 DGKHQ86XP1 1220 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 C2orf69Q8N8R5 385 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 AGXT2Q9BYV1 514 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 GBA2Q9HCG7 927 aaPredicted RBP23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 CYP46A1Q9Y6A2 500 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 TRPM7Q96QT4 1865 aa23.28■■□□□ 1.32
SCAMP3-209ENST00000497470 GREB1LQ9C091 1923 aaPredicted RBP23.27■■□□□ 1.32
SCAMP3-209ENST00000497470 B4E1Z4 1266 aa23.27■■□□□ 1.32
SCAMP3-209ENST00000497470 RANBP6O60518 1105 aaKnown RBP23.27■■□□□ 1.32
SCAMP3-209ENST00000497470 KDM4AO75164 1064 aa23.27■■□□□ 1.32
SCAMP3-209ENST00000497470 TFAP4Q01664 338 aa23.27■■□□□ 1.32
SCAMP3-209ENST00000497470 SART3Q15020 963 aaKnown RBP23.27■■□□□ 1.32
SCAMP3-209ENST00000497470 SCYL3Q8IZE3 742 aa23.27■■□□□ 1.32
SCAMP3-209ENST00000497470 JAKMIP1Q96N16 626 aaKnown RBP23.27■■□□□ 1.32
SCAMP3-209ENST00000497470 MYH8P13535 1937 aa23.26■■□□□ 1.31
SCAMP3-209ENST00000497470 TRAF5O00463 557 aa23.26■■□□□ 1.31
SCAMP3-209ENST00000497470 RPS6KB1P23443 525 aa23.26■■□□□ 1.31
SCAMP3-209ENST00000497470 LIFRP42702 1097 aa23.26■■□□□ 1.31
SCAMP3-209ENST00000497470 SLC4A8Q2Y0W8 1093 aa23.26■■□□□ 1.31
SCAMP3-209ENST00000497470 HHIPL1Q96JK4 782 aa23.26■■□□□ 1.31
SCAMP3-209ENST00000497470 WRNIP1Q96S55 665 aa23.26■■□□□ 1.31
SCAMP3-209ENST00000497470 TOMM22Q9NS69 142 aa23.26■■□□□ 1.31
SCAMP3-209ENST00000497470 NYAP2Q9P242 653 aa23.26■■□□□ 1.31
SCAMP3-209ENST00000497470 PRDM1O75626 825 aa23.25■■□□□ 1.31
SCAMP3-209ENST00000497470 MKL1Q969V6 931 aa23.25■■□□□ 1.31
SCAMP3-209ENST00000497470 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.25■■□□□ 1.31
SCAMP3-209ENST00000497470 ZBTB21Q9ULJ3 1066 aa23.25■■□□□ 1.31
SCAMP3-209ENST00000497470 CSADQ9Y600 493 aa23.25■■□□□ 1.31
SCAMP3-209ENST00000497470 CELF2O95319 508 aaKnown RBP23.24■■□□□ 1.31
SCAMP3-209ENST00000497470 AKR1B1P15121 316 aa23.24■■□□□ 1.31
SCAMP3-209ENST00000497470 CASTP20810 708 aaKnown RBP23.24■■□□□ 1.31
SCAMP3-209ENST00000497470 RRP12Q5JTH9 1297 aaKnown RBP23.24■■□□□ 1.31
SCAMP3-209ENST00000497470 CST9Q5W186 159 aa23.24■■□□□ 1.31
SCAMP3-209ENST00000497470 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.24■■□□□ 1.31
SCAMP3-209ENST00000497470 ZSCAN10Q96SZ4 725 aaPredicted RBP23.24■■□□□ 1.31
SCAMP3-209ENST00000497470 UBAC1Q9BSL1 405 aa23.24■■□□□ 1.31
SCAMP3-209ENST00000497470 WDR18Q9BV38 432 aa23.24■■□□□ 1.31
SCAMP3-209ENST00000497470 INCENPQ9NQS7 918 aa23.24■■□□□ 1.31
SCAMP3-209ENST00000497470 MTMR4Q9NYA4 1195 aa23.24■■□□□ 1.31
SCAMP3-209ENST00000497470 ANGEL1Q9UNK9 670 aaKnown RBP23.24■■□□□ 1.31
SCAMP3-209ENST00000497470 ERICH2A1L162 156 aa23.23■■□□□ 1.31
SCAMP3-209ENST00000497470 FAM196BA6NMK8 535 aa23.23■■□□□ 1.31
SCAMP3-209ENST00000497470 EVCP57679 992 aa23.23■■□□□ 1.31
SCAMP3-209ENST00000497470 RRP1BQ14684 758 aaKnown RBP23.23■■□□□ 1.31
SCAMP3-209ENST00000497470 ANKRD1Q15327 319 aa23.23■■□□□ 1.31
SCAMP3-209ENST00000497470 SGMS1Q86VZ5 419 aa23.23■■□□□ 1.31
SCAMP3-209ENST00000497470 IGDCC4Q8TDY8 1250 aa23.23■■□□□ 1.31
SCAMP3-209ENST00000497470 PICK1Q9NRD5 415 aa23.23■■□□□ 1.31
SCAMP3-209ENST00000497470 USP17L5A8MUK1 530 aa23.22■■□□□ 1.31
SCAMP3-209ENST00000497470 PRC1O43663 620 aa23.22■■□□□ 1.31
SCAMP3-209ENST00000497470 TTLL1O95922 423 aa23.22■■□□□ 1.31
SCAMP3-209ENST00000497470 GH2P01242 217 aa23.22■■□□□ 1.31
SCAMP3-209ENST00000497470 INPP5BP32019 993 aa23.22■■□□□ 1.31
SCAMP3-209ENST00000497470 GUCY1A2P33402 732 aa23.22■■□□□ 1.31
SCAMP3-209ENST00000497470 RCAN1P53805 252 aa23.22■■□□□ 1.31
SCAMP3-209ENST00000497470 ANTXR2P58335 489 aa23.22■■□□□ 1.31
SCAMP3-209ENST00000497470 SEC23AQ15436 765 aa23.22■■□□□ 1.31
SCAMP3-209ENST00000497470 CYB5R4Q7L1T6 521 aa23.22■■□□□ 1.31
SCAMP3-209ENST00000497470 ERO1BQ86YB8 467 aa23.22■■□□□ 1.31
SCAMP3-209ENST00000497470 SH2D4AQ9H788 454 aa23.22■■□□□ 1.31
SCAMP3-209ENST00000497470 AS3MTQ9HBK9 375 aa23.22■■□□□ 1.31
SCAMP3-209ENST00000497470 IL17RBQ9NRM6 502 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms