RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 SWI5Q1ZZU3 235 aa6.04□□□□□ -1.44
CMSS1-209ENST00000497345 ELMSAN1Q6PJG2 1045 aa6.04□□□□□ -1.44
CMSS1-209ENST00000497345 G2E3Q7L622 706 aa6.04□□□□□ -1.44
CMSS1-209ENST00000497345 TXNRD3Q86VQ6 643 aa6.04□□□□□ -1.44
CMSS1-209ENST00000497345 TREML1Q86YW5 311 aa6.04□□□□□ -1.44
CMSS1-209ENST00000497345 CMTR1Q8N1G2 835 aaKnown RBP6.04□□□□□ -1.44
CMSS1-209ENST00000497345 ACSBG1Q96GR2 724 aa6.04□□□□□ -1.44
CMSS1-209ENST00000497345 STK31Q9BXU1 1019 aa6.04□□□□□ -1.44
CMSS1-209ENST00000497345 BCL11AQ9H165 835 aa6.04□□□□□ -1.44
CMSS1-209ENST00000497345 TLR7Q9NYK1 1049 aaKnown RBP6.04□□□□□ -1.44
CMSS1-209ENST00000497345 KAT6BQ8WYB5 2073 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 PCDH11XQ9BZA7 1347 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 PCDH11YQ9BZA8 1340 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 OVOS2A0A0G2JMS6 1433 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 KDM6AO15550 1401 aaPredicted RBP6.03□□□□□ -1.44
CMSS1-209ENST00000497345 NCAPD2Q15021 1401 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 IPO8O15397 1037 aaKnown RBP6.03□□□□□ -1.44
CMSS1-209ENST00000497345 PTCD1O75127 700 aaKnown RBP6.03□□□□□ -1.44
CMSS1-209ENST00000497345 XYLBO75191 536 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 HSP90AB1P08238 724 aaKnown RBP6.03□□□□□ -1.44
CMSS1-209ENST00000497345 CT47B1P0C2W7 299 aaPredicted RBP6.03□□□□□ -1.44
CMSS1-209ENST00000497345 TRIM27P14373 513 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 NRLP54845 237 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 EIF4A1P60842 406 aaKnown RBP6.03□□□□□ -1.44
CMSS1-209ENST00000497345 GPLD1P80108 840 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 ELOAQ14241 798 aaKnown RBP6.03□□□□□ -1.44
CMSS1-209ENST00000497345 SLC4A10Q6U841 1118 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 HFE2Q6ZVN8 426 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 UNC5CLQ8IV45 518 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 DZIP1LQ8IYY4 767 aaKnown RBP6.03□□□□□ -1.44
CMSS1-209ENST00000497345 RGL4Q8IZJ4 473 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 TTC5Q8N0Z6 440 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 DTWD1Q8N5C7 304 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 TMEM57Q8N5G2 664 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 SLC52A2Q9HAB3 445 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 VIRMAQ69YN4 1812 aaKnown RBP6.03□□□□□ -1.44
CMSS1-209ENST00000497345 ABCC6O95255 1503 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 LRP6O75581 1613 aa6.03□□□□□ -1.44
CMSS1-209ENST00000497345 PARP4Q9UKK3 1724 aaKnown RBP6.02□□□□□ -1.45
CMSS1-209ENST00000497345 AFF2P51816 1311 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 SPATA31A1Q5TZJ5 1347 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 F6X3S4 739 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 PRMT3O60678 531 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 H2AFB1P0C5Y9 115 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 H2AFB2P0C5Z0 115 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 MYL6BP14649 208 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 AIMP1Q12904 312 aaKnown RBP6.02□□□□□ -1.45
CMSS1-209ENST00000497345 DDB1Q16531 1140 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 ALDH1L2Q3SY69 923 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 PRSS36Q5K4E3 855 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 CCDC30Q5VVM6 783 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 ATF7IPQ6VMQ6 1270 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 SKAP1Q86WV1 359 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 FBXO11Q86XK2 927 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 WFDC8Q8IUA0 241 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 SMG9Q9H0W8 520 aaKnown RBP6.02□□□□□ -1.45
CMSS1-209ENST00000497345 C1orf115Q9H7X2 142 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 PHAXQ9H814 394 aaKnown RBP6.02□□□□□ -1.45
CMSS1-209ENST00000497345 TMOD3Q9NYL9 352 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 CHPF2Q9P2E5 772 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 ZMIZ1Q9ULJ6 1067 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 KCNMB2Q9Y691 235 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 CEMIPQ8WUJ3 1361 aa6.02□□□□□ -1.45
CMSS1-209ENST00000497345 SPATA31A5Q5VU36 1347 aa6.01□□□□□ -1.45
CMSS1-209ENST00000497345 SPATA31A6Q5VVP1 1343 aa6.01□□□□□ -1.45
CMSS1-209ENST00000497345 SPATA31A7Q8IWB4 1347 aa6.01□□□□□ -1.45
CMSS1-209ENST00000497345 KIF16BQ96L93 1317 aa6.01□□□□□ -1.45
CMSS1-209ENST00000497345 LRRC37A3O60309 1634 aa6.01□□□□□ -1.45
CMSS1-209ENST00000497345 LOC102724428A0A0B4J2F2 783 aa6.01□□□□□ -1.45
CMSS1-209ENST00000497345 BRD2P25440 801 aaKnown RBP6.01□□□□□ -1.45
CMSS1-209ENST00000497345 SIK1P57059 783 aa6.01□□□□□ -1.45
CMSS1-209ENST00000497345 PDE3AQ14432 1141 aa6.01□□□□□ -1.45
CMSS1-209ENST00000497345 MVPQ14764 893 aaKnown RBP6.01□□□□□ -1.45
CMSS1-209ENST00000497345 OCLNQ16625 522 aa6.01□□□□□ -1.45
CMSS1-209ENST00000497345 PROSER3Q2NL68 480 aa6.01□□□□□ -1.45
CMSS1-209ENST00000497345 ERICH6BQ5W0A0 696 aa6.01□□□□□ -1.45
CMSS1-209ENST00000497345 ZNF790Q6PG37 636 aa6.01□□□□□ -1.45
CMSS1-209ENST00000497345 ZNF496Q96IT1 587 aaPredicted RBP6.01□□□□□ -1.45
CMSS1-209ENST00000497345 API5Q9BZZ5 524 aaKnown RBP6.01□□□□□ -1.45
CMSS1-209ENST00000497345 SCN11AQ9UI33 1791 aa6.01□□□□□ -1.45
CMSS1-209ENST00000497345 PKD1L3Q7Z443 1732 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 NRAPQ86VF7 1730 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 J3QW42 95 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 MMP20O60882 483 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 PSAPP07602 524 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 EIF2AK2P19525 551 aaKnown RBP6□□□□□ -1.45
CMSS1-209ENST00000497345 VPS72Q15906 364 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 FOXD4L6Q3SYB3 417 aaPredicted RBP6□□□□□ -1.45
CMSS1-209ENST00000497345 IGF2-ASQ6U949 168 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 FOXD4L3Q6VB84 417 aaPredicted RBP6□□□□□ -1.45
CMSS1-209ENST00000497345 ETFBKMTQ8IXQ9 262 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 MARCH10Q8NA82 808 aaPredicted RBP6□□□□□ -1.45
CMSS1-209ENST00000497345 PIGBQ92521 554 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 TP53INP1Q96A56 240 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 COL26A1Q96A83 441 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 FMNL2Q96PY5 1086 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 SSBP4Q9BWG4 385 aaPredicted RBP6□□□□□ -1.45
CMSS1-209ENST00000497345 SAP130Q9H0E3 1048 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 ASAP1Q9ULH1 1129 aa6□□□□□ -1.45
CMSS1-209ENST00000497345 USP16Q9Y5T5 823 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms