RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 ACAD11Q709F0 780 aa8.72□□□□□ -1.01
MSH5-219ENST00000497269 AGGF1Q8N302 714 aaeCLIP8.72□□□□□ -1.011e-10■■□□□ 11.8
MSH5-219ENST00000497269 RPGRIP1LQ68CZ1 1315 aa8.72□□□□□ -1.01
MSH5-219ENST00000497269 PPLO60437 1756 aa8.71□□□□□ -1.01
MSH5-219ENST00000497269 DLL1O00548 723 aa8.71□□□□□ -1.02
MSH5-219ENST00000497269 ALX3O95076 343 aa8.71□□□□□ -1.02
MSH5-219ENST00000497269 ECEL1O95672 775 aa8.71□□□□□ -1.02
MSH5-219ENST00000497269 B3GALT4O96024 378 aa8.71□□□□□ -1.02
MSH5-219ENST00000497269 CELA3AP09093 270 aa8.71□□□□□ -1.02
MSH5-219ENST00000497269 SELPP16109 830 aa8.71□□□□□ -1.02
MSH5-219ENST00000497269 PTPN12Q05209 780 aaKnown RBP8.71□□□□□ -1.02
MSH5-219ENST00000497269 MAP3K11Q16584 847 aa8.71□□□□□ -1.02
MSH5-219ENST00000497269 DUOXA2Q1HG44 320 aa8.71□□□□□ -1.02
MSH5-219ENST00000497269 TSNAXIP1Q2TAA8 658 aa8.71□□□□□ -1.02
MSH5-219ENST00000497269 MAP4K3Q8IVH8 894 aa8.71□□□□□ -1.02
MSH5-219ENST00000497269 MRRFQ96E11 262 aaKnown RBP8.71□□□□□ -1.02
MSH5-219ENST00000497269 OSGEPQ9NPF4 335 aa8.71□□□□□ -1.02
MSH5-219ENST00000497269 HFM1A2PYH4 1435 aa8.71□□□□□ -1.02
MSH5-219ENST00000497269 F6X3S4 739 aa8.7□□□□□ -1.02
MSH5-219ENST00000497269 GDF11O95390 407 aa8.7□□□□□ -1.02
MSH5-219ENST00000497269 CHRNA4P43681 627 aa8.7□□□□□ -1.02
MSH5-219ENST00000497269 KRT28Q7Z3Y7 464 aa8.7□□□□□ -1.02
MSH5-219ENST00000497269 WNT8BQ93098 351 aa8.7□□□□□ -1.02
MSH5-219ENST00000497269 SRA1Q9HD15 236 aaKnown RBP8.7□□□□□ -1.02
MSH5-219ENST00000497269 TMEM39AQ9NV64 488 aa8.7□□□□□ -1.02
MSH5-219ENST00000497269 TM4SF5O14894 197 aa8.69□□□□□ -1.02
MSH5-219ENST00000497269 PAGE1O75459 146 aa8.69□□□□□ -1.02
MSH5-219ENST00000497269 MAOBP27338 520 aa8.69□□□□□ -1.02
MSH5-219ENST00000497269 GSK3AP49840 483 aa8.69□□□□□ -1.02
MSH5-219ENST00000497269 PPP2R3AQ06190 1150 aa8.69□□□□□ -1.02
MSH5-219ENST00000497269 KCNMA1Q12791 1236 aa8.69□□□□□ -1.02
MSH5-219ENST00000497269 CCDC85BQ15834 202 aaPredicted RBP8.69□□□□□ -1.02
MSH5-219ENST00000497269 RPS26P11Q5JNZ5 115 aaPredicted RBP8.69□□□□□ -1.02
MSH5-219ENST00000497269 PMFBP1Q8TBY8 1022 aa8.69□□□□□ -1.02
MSH5-219ENST00000497269 CRELD1Q96HD1 420 aa8.69□□□□□ -1.02
MSH5-219ENST00000497269 TRIM56Q9BRZ2 755 aaKnown RBP8.69□□□□□ -1.02
MSH5-219ENST00000497269 ZFYVE1Q9HBF4 777 aa8.69□□□□□ -1.02
MSH5-219ENST00000497269 CBX8Q9HC52 389 aa8.69□□□□□ -1.02
MSH5-219ENST00000497269 TRPC5Q9UL62 973 aaPredicted RBP8.69□□□□□ -1.02
MSH5-219ENST00000497269 CCDC144AA2RUR9 1427 aa8.69□□□□□ -1.02
MSH5-219ENST00000497269 CTSBP07858 339 aa8.68□□□□□ -1.02
MSH5-219ENST00000497269 MRPL58Q14197 206 aaKnown RBP8.68□□□□□ -1.02
MSH5-219ENST00000497269 POU4F3Q15319 338 aa8.68□□□□□ -1.02
MSH5-219ENST00000497269 IGF2-ASQ6U949 168 aa8.68□□□□□ -1.02
MSH5-219ENST00000497269 TMEM151AQ8N4L1 468 aa8.68□□□□□ -1.02
MSH5-219ENST00000497269 TMEM87AQ8NBN3 555 aa8.68□□□□□ -1.02
MSH5-219ENST00000497269 DDX54Q8TDD1 881 aaKnown RBP8.68□□□□□ -1.02
MSH5-219ENST00000497269 STK35Q8TDR2 534 aa8.68□□□□□ -1.02
MSH5-219ENST00000497269 NECAB3Q96P71 396 aaPredicted RBP8.68□□□□□ -1.02
MSH5-219ENST00000497269 CORO1BQ9BR76 489 aa8.68□□□□□ -1.02
MSH5-219ENST00000497269 HIRIP3Q9BW71 556 aaPredicted RBP8.68□□□□□ -1.02
MSH5-219ENST00000497269 NPHP3Q7Z494 1330 aa8.68□□□□□ -1.02
MSH5-219ENST00000497269 PTCH1Q13635 1447 aa8.68□□□□□ -1.02
MSH5-219ENST00000497269 C1QTNF9BB2RNN3 333 aa8.67□□□□□ -1.02
MSH5-219ENST00000497269 RGPD8O14715 1765 aaPredicted RBP8.67□□□□□ -1.02
MSH5-219ENST00000497269 PDE3AQ14432 1141 aa8.67□□□□□ -1.02
MSH5-219ENST00000497269 TAF1CQ15572 869 aaPredicted RBP8.67□□□□□ -1.02
MSH5-219ENST00000497269 SULF2Q8IWU5 870 aa8.67□□□□□ -1.02
MSH5-219ENST00000497269 PRAM1Q96QH2 718 aa8.67□□□□□ -1.02
MSH5-219ENST00000497269 NACC1Q96RE7 527 aa8.67□□□□□ -1.02
MSH5-219ENST00000497269 MRPL18Q9H0U6 180 aaKnown RBP8.67□□□□□ -1.02
MSH5-219ENST00000497269 SOX17Q9H6I2 414 aaPredicted RBP8.67□□□□□ -1.02
MSH5-219ENST00000497269 PPM1HQ9ULR3 514 aa8.67□□□□□ -1.02
MSH5-219ENST00000497269 LRPPRCP42704 1394 aaKnown RBP8.66□□□□□ -1.02
MSH5-219ENST00000497269 LOC100289279A0A1B0GTE1 492 aa8.66□□□□□ -1.02
MSH5-219ENST00000497269 ENC1O14682 589 aa8.66□□□□□ -1.02
MSH5-219ENST00000497269 IREB2P48200 963 aaKnown RBP8.66□□□□□ -1.02
MSH5-219ENST00000497269 CD163Q86VB7 1156 aa8.66□□□□□ -1.02
MSH5-219ENST00000497269 DCAF11Q8TEB1 546 aa8.66□□□□□ -1.02
MSH5-219ENST00000497269 KCNB2Q92953 911 aa8.66□□□□□ -1.02
MSH5-219ENST00000497269 RUSC1Q9BVN2 902 aa8.66□□□□□ -1.02
MSH5-219ENST00000497269 BACH2Q9BYV9 841 aa8.66□□□□□ -1.02
MSH5-219ENST00000497269 CEP44Q9C0F1 390 aa8.66□□□□□ -1.02
MSH5-219ENST00000497269 KIAA1522Q9P206 1035 aaPredicted RBP8.66□□□□□ -1.02
MSH5-219ENST00000497269 POGKQ9P215 609 aa8.66□□□□□ -1.02
MSH5-219ENST00000497269 BCL9LQ86UU0 1499 aa8.65□□□□□ -1.02
MSH5-219ENST00000497269 PXDNQ92626 1479 aa8.65□□□□□ -1.02
MSH5-219ENST00000497269 CDK12Q9NYV4 1490 aaPredicted RBP8.65□□□□□ -1.02
MSH5-219ENST00000497269 SPATA31E1Q6ZUB1 1445 aa8.65□□□□□ -1.02
MSH5-219ENST00000497269 YTHDC2Q9H6S0 1430 aaKnown RBP8.65□□□□□ -1.02
MSH5-219ENST00000497269 C9orf172C9J069 976 aa8.65□□□□□ -1.02
MSH5-219ENST00000497269 DLGAP3O95886 979 aa8.65□□□□□ -1.02
MSH5-219ENST00000497269 CYP11A1P05108 521 aa8.65□□□□□ -1.02
MSH5-219ENST00000497269 LENG1Q96BZ8 264 aaPredicted RBP8.65□□□□□ -1.02
MSH5-219ENST00000497269 C14orf93Q9H972 538 aaKnown RBP8.65□□□□□ -1.02
MSH5-219ENST00000497269 ATRNO75882 1429 aa8.64□□□□□ -1.03
MSH5-219ENST00000497269 SPATA31A3Q5VYP0 1347 aa8.64□□□□□ -1.03
MSH5-219ENST00000497269 RECKO95980 971 aa8.64□□□□□ -1.03
MSH5-219ENST00000497269 GLB1P16278 677 aa8.64□□□□□ -1.03
MSH5-219ENST00000497269 MBTPS1Q14703 1052 aa8.64□□□□□ -1.03
MSH5-219ENST00000497269 PCNX4Q63HM2 1172 aa8.64□□□□□ -1.03
MSH5-219ENST00000497269 MAP1SQ66K74 1059 aaPredicted RBP8.64□□□□□ -1.03
MSH5-219ENST00000497269 MPRIPQ6WCQ1 1025 aa8.64□□□□□ -1.03
MSH5-219ENST00000497269 KIAA1211Q6ZU35 1233 aa8.64□□□□□ -1.03
MSH5-219ENST00000497269 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.64□□□□□ -1.03
MSH5-219ENST00000497269 DEFB132Q7Z7B7 95 aa8.64□□□□□ -1.03
MSH5-219ENST00000497269 GRIN3AQ8TCU5 1115 aa8.64□□□□□ -1.03
MSH5-219ENST00000497269 AKTIPQ9H8T0 292 aa8.64□□□□□ -1.03
MSH5-219ENST00000497269 ABCC11Q96J66 1382 aa8.63□□□□□ -1.03
MSH5-219ENST00000497269 ANKRD30BQ9BXX2 1392 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms