RNA–Protein interactions for RNA: ENST00000497227.1

CARMIL1-204, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

TSL 3

Gene CARMIL1, Length 707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-204ENST00000497227 RFC5P40937 340 aa6.53□□□□□ -1.36
CARMIL1-204ENST00000497227 ARID5BQ14865 1188 aa6.53□□□□□ -1.36
CARMIL1-204ENST00000497227 SUZ12Q15022 739 aaKnown RBP6.53□□□□□ -1.36
CARMIL1-204ENST00000497227 RALBP1Q15311 655 aa6.53□□□□□ -1.36
CARMIL1-204ENST00000497227 OTOP1Q7RTM1 612 aa6.53□□□□□ -1.36
CARMIL1-204ENST00000497227 PODNQ7Z5L7 613 aa6.53□□□□□ -1.36
CARMIL1-204ENST00000497227 LRRN4Q8WUT4 740 aa6.53□□□□□ -1.36
CARMIL1-204ENST00000497227 FOXJ1Q92949 421 aa6.53□□□□□ -1.36
CARMIL1-204ENST00000497227 EYA3Q99504 573 aa6.53□□□□□ -1.36
CARMIL1-204ENST00000497227 PHAXQ9H814 394 aaKnown RBP6.53□□□□□ -1.36
CARMIL1-204ENST00000497227 HDAC9Q9UKV0 1011 aa6.53□□□□□ -1.36
CARMIL1-204ENST00000497227 USP17L3A6NCW0 530 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 USP17L4A6NCW7 530 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 PATL2C9JE40 543 aaKnown RBP6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 IGF2BP3O00425 579 aaKnown RBP eCLIP6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 SIAH2O43255 324 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 NRDCO43847 1150 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 SMARCA5O60264 1052 aaPredicted RBP6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 MARCH6O60337 910 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 ZNF853P0CG23 659 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 CALD1Q05682 793 aaKnown RBP6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 SETDB1Q15047 1291 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 TMEM259Q4ZIN3 620 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 USP17L1Q7RTZ2 530 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 ZBTB38Q8NAP3 1195 aaPredicted RBP6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 HPS1Q92902 700 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 KIFC2Q96AC6 838 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 CCDC85AQ96PX6 553 aaPredicted RBP6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 PTPN18Q99952 460 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 ANKIB1Q9P2G1 1089 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 GGA1Q9UJY5 639 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 PRDM4Q9UKN5 801 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 MINPP1Q9UNW1 487 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 PCDHAC2Q9Y5I4 1007 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 LAMA3Q16787 3333 aa6.52□□□□□ -1.37
CARMIL1-204ENST00000497227 AOX1Q06278 1338 aa6.51□□□□□ -1.37
CARMIL1-204ENST00000497227 PCCAP05165 728 aaPredicted RBP6.51□□□□□ -1.37
CARMIL1-204ENST00000497227 KLRK1P26718 216 aa6.51□□□□□ -1.37
CARMIL1-204ENST00000497227 PRKG1Q13976 671 aa6.51□□□□□ -1.37
CARMIL1-204ENST00000497227 NR6A1Q15406 480 aa6.51□□□□□ -1.37
CARMIL1-204ENST00000497227 DUSP27Q5VZP5 1158 aa6.51□□□□□ -1.37
CARMIL1-204ENST00000497227 CACTIN-AS1Q8N1I8 211 aa6.51□□□□□ -1.37
CARMIL1-204ENST00000497227 ZSCAN1Q8NBB4 408 aa6.51□□□□□ -1.37
CARMIL1-204ENST00000497227 TTLL11Q8NHH1 800 aa6.51□□□□□ -1.37
CARMIL1-204ENST00000497227 CLMNQ96JQ2 1002 aa6.51□□□□□ -1.37
CARMIL1-204ENST00000497227 DBF4Q9UBU7 674 aaPredicted RBP6.51□□□□□ -1.37
CARMIL1-204ENST00000497227 FKBPLQ9UIM3 349 aa6.51□□□□□ -1.37
CARMIL1-204ENST00000497227 PTPN22Q9Y2R2 807 aa6.51□□□□□ -1.37
CARMIL1-204ENST00000497227 IRS2Q9Y4H2 1338 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 PAPPA2Q9BXP8 1791 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 SNAP23O00161 211 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 PDE8AO60658 829 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 USP2O75604 605 aaPredicted RBP6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 IGKV5-2P06315 115 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 HOXB7P09629 217 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 ATP2B4P23634 1241 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 FLIIQ13045 1269 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 NNTQ13423 1086 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 MAP3K11Q16584 847 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 CCDC96Q2M329 555 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 HDGFL1Q5TGJ6 251 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 STRIP1Q5VSL9 837 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 CERS5Q8N5B7 392 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 CCDC191Q8NCU4 936 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 ARMC5Q96C12 935 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 ARHGAP9Q9BRR9 750 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 MTA3Q9BTC8 594 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 HYPKQ9NX55 129 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 XDHP47989 1333 aa6.5□□□□□ -1.37
CARMIL1-204ENST00000497227 CAPN5O15484 640 aaPredicted RBP6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 TRAK2O60296 914 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 SASH1O94885 1247 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 ADH1CP00326 375 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 CCT4P50991 539 aaKnown RBP6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 INHBEP58166 350 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 IRF5Q13568 498 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 CCDC152Q4G0S7 254 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 INTS3Q68E01 1043 aaKnown RBP6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 PDXDC2PQ6P474 469 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 ZBTB33Q86T24 672 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 NPAS3Q8IXF0 933 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 CCDC146Q8IYE0 955 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 C8orf58Q8NAV2 365 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 CD99L2Q8TCZ2 262 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 GCC1Q96CN9 775 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 SLC10A4Q96EP9 437 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 PRMT6Q96LA8 375 aaPredicted RBP6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 MYD88Q99836 296 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 DEFB129Q9H1M3 183 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 PNNQ9H307 717 aaKnown RBP6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 GREM2Q9H772 168 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 MBIPQ9NS73 344 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 BSDC1Q9NW68 430 aaPredicted RBP6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 ANGEL1Q9UNK9 670 aaKnown RBP6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 TRIM17Q9Y577 477 aa6.49□□□□□ -1.37
CARMIL1-204ENST00000497227 SSC5DA1L4H1 1573 aa6.48□□□□□ -1.37
CARMIL1-204ENST00000497227 ZNF646O15015 1829 aaPredicted RBP6.48□□□□□ -1.37
CARMIL1-204ENST00000497227 H7C1W4 665 aa6.48□□□□□ -1.37
CARMIL1-204ENST00000497227 ELL2O00472 640 aaPredicted RBP6.48□□□□□ -1.37
CARMIL1-204ENST00000497227 CASP7P55210 303 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms