RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 ELP3Q9H9T3 547 aa7.79□□□□□ -1.16
ITGA6-211ENST00000497107 JPH1Q9HDC5 661 aaPredicted RBP7.79□□□□□ -1.16
ITGA6-211ENST00000497107 NAGPAQ9UK23 515 aa7.79□□□□□ -1.16
ITGA6-211ENST00000497107 IVNS1ABPQ9Y6Y0 642 aa7.79□□□□□ -1.16
ITGA6-211ENST00000497107 FZD6O60353 706 aa7.78□□□□□ -1.16
ITGA6-211ENST00000497107 RGS9O75916 674 aaPredicted RBP7.78□□□□□ -1.16
ITGA6-211ENST00000497107 GHRHP01286 108 aa7.78□□□□□ -1.16
ITGA6-211ENST00000497107 CPB1P15086 417 aa7.78□□□□□ -1.16
ITGA6-211ENST00000497107 NKAPLQ5M9Q1 402 aa7.78□□□□□ -1.16
ITGA6-211ENST00000497107 ELMSAN1Q6PJG2 1045 aa7.78□□□□□ -1.16
ITGA6-211ENST00000497107 TTC9Q92623 222 aa7.78□□□□□ -1.16
ITGA6-211ENST00000497107 LTV1Q96GA3 475 aaPredicted RBP7.78□□□□□ -1.16
ITGA6-211ENST00000497107 ZBTB40Q9NUA8 1239 aa7.78□□□□□ -1.16
ITGA6-211ENST00000497107 BRPF3Q9ULD4 1205 aa7.78□□□□□ -1.16
ITGA6-211ENST00000497107 MARF1Q9Y4F3 1742 aaKnown RBP7.78□□□□□ -1.16
ITGA6-211ENST00000497107 CRB1P82279 1406 aa7.78□□□□□ -1.16
ITGA6-211ENST00000497107 NCOA3Q9Y6Q9 1424 aa7.78□□□□□ -1.16
ITGA6-211ENST00000497107 LOC102724428A0A0B4J2F2 783 aa7.77□□□□□ -1.17
ITGA6-211ENST00000497107 SCO2A0A1W2PP80 73 aa7.77□□□□□ -1.17
ITGA6-211ENST00000497107 BTBD11A6QL63 1104 aa7.77□□□□□ -1.17
ITGA6-211ENST00000497107 GNAT3A8MTJ3 354 aa7.77□□□□□ -1.17
ITGA6-211ENST00000497107 NDUFB5O43674 189 aa7.77□□□□□ -1.17
ITGA6-211ENST00000497107 EIF2AK2P19525 551 aaKnown RBP7.77□□□□□ -1.17
ITGA6-211ENST00000497107 GATA4P43694 442 aa7.77□□□□□ -1.17
ITGA6-211ENST00000497107 SIK1P57059 783 aa7.77□□□□□ -1.17
ITGA6-211ENST00000497107 MLLT1Q03111 559 aaPredicted RBP7.77□□□□□ -1.17
ITGA6-211ENST00000497107 HYAL2Q12891 473 aa7.77□□□□□ -1.17
ITGA6-211ENST00000497107 KRT28Q7Z3Y7 464 aa7.77□□□□□ -1.17
ITGA6-211ENST00000497107 FOXD4L4Q8WXT5 416 aaPredicted RBP7.77□□□□□ -1.17
ITGA6-211ENST00000497107 NSUN5Q96P11 429 aaKnown RBP7.77□□□□□ -1.17
ITGA6-211ENST00000497107 ORAI2Q96SN7 254 aa7.77□□□□□ -1.17
ITGA6-211ENST00000497107 LPIN3Q9BQK8 851 aa7.77□□□□□ -1.17
ITGA6-211ENST00000497107 BABAM1Q9NWV8 329 aa7.77□□□□□ -1.17
ITGA6-211ENST00000497107 NOP58Q9Y2X3 529 aaKnown RBP7.77□□□□□ -1.17
ITGA6-211ENST00000497107 SOWAHDA6NJG2 315 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 ATF3P18847 181 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 PERM1Q5SV97 790 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 ARTNQ5T4W7 220 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 SND1Q7KZF4 910 aaKnown RBP eCLIP7.76□□□□□ -1.17
ITGA6-211ENST00000497107 GJD3Q8N144 294 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 NUDT8Q8WV74 236 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 PMEPA1Q969W9 287 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 TRIM11Q96F44 468 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 SPACA7Q96KW9 195 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 PLVAPQ9BX97 442 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 TMEM63CQ9P1W3 806 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 TSPYL4Q9UJ04 414 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 NFAT5O94916 1531 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 KIF1AQ12756 1690 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 ABCC4O15439 1325 aa7.76□□□□□ -1.17
ITGA6-211ENST00000497107 SOS1Q07889 1333 aaPredicted RBP7.76□□□□□ -1.17
ITGA6-211ENST00000497107 C1orf167Q5SNV9 1468 aa7.75□□□□□ -1.17
ITGA6-211ENST00000497107 MAP3K5Q99683 1374 aa7.75□□□□□ -1.17
ITGA6-211ENST00000497107 GCP02774 474 aa7.75□□□□□ -1.17
ITGA6-211ENST00000497107 NID1P14543 1247 aa7.75□□□□□ -1.17
ITGA6-211ENST00000497107 AFF1P51825 1210 aaKnown RBP7.75□□□□□ -1.17
ITGA6-211ENST00000497107 ARHGAP4P98171 946 aa7.75□□□□□ -1.17
ITGA6-211ENST00000497107 ECM1Q16610 540 aa7.75□□□□□ -1.17
ITGA6-211ENST00000497107 C8orf86Q6ZUL3 223 aa7.75□□□□□ -1.17
ITGA6-211ENST00000497107 HFE2Q6ZVN8 426 aa7.75□□□□□ -1.17
ITGA6-211ENST00000497107 SMC5Q8IY18 1101 aa7.75□□□□□ -1.17
ITGA6-211ENST00000497107 CITED4Q96RK1 184 aa7.75□□□□□ -1.17
ITGA6-211ENST00000497107 ZFP64Q9NPA5 681 aa7.75□□□□□ -1.17
ITGA6-211ENST00000497107 PTPRCP08575 1304 aa7.75□□□□□ -1.17
ITGA6-211ENST00000497107 KIF4AO95239 1232 aa7.74□□□□□ -1.17
ITGA6-211ENST00000497107 COL9A3Q14050 684 aaPredicted RBP7.74□□□□□ -1.17
ITGA6-211ENST00000497107 TAF7Q15545 349 aaPredicted RBP7.74□□□□□ -1.17
ITGA6-211ENST00000497107 PLEKHO1Q53GL0 409 aaPredicted RBP7.74□□□□□ -1.17
ITGA6-211ENST00000497107 PRRT3Q5FWE3 981 aa7.74□□□□□ -1.17
ITGA6-211ENST00000497107 NBPF6Q5VWK0 638 aa7.74□□□□□ -1.17
ITGA6-211ENST00000497107 INTS3Q68E01 1043 aaKnown RBP7.74□□□□□ -1.17
ITGA6-211ENST00000497107 ARHGEF25Q86VW2 580 aa7.74□□□□□ -1.17
ITGA6-211ENST00000497107 SNX29Q8TEQ0 813 aa7.74□□□□□ -1.17
ITGA6-211ENST00000497107 GCC1Q96CN9 775 aa7.74□□□□□ -1.17
ITGA6-211ENST00000497107 NBPF4Q96M43 638 aa7.74□□□□□ -1.17
ITGA6-211ENST00000497107 STK31Q9BXU1 1019 aa7.74□□□□□ -1.17
ITGA6-211ENST00000497107 CHMP4AQ9BY43 222 aa7.74□□□□□ -1.17
ITGA6-211ENST00000497107 SMG9Q9H0W8 520 aaKnown RBP7.74□□□□□ -1.17
ITGA6-211ENST00000497107 CCDC87Q9NVE4 849 aa7.74□□□□□ -1.17
ITGA6-211ENST00000497107 DCCP43146 1447 aa7.74□□□□□ -1.17
ITGA6-211ENST00000497107 USP19O94966 1318 aa7.74□□□□□ -1.17
ITGA6-211ENST00000497107 LTN1O94822 1766 aa7.74□□□□□ -1.17
ITGA6-211ENST00000497107 SLIT3O75094 1523 aa7.73□□□□□ -1.17
ITGA6-211ENST00000497107 TMEM94Q12767 1356 aa7.73□□□□□ -1.17
ITGA6-211ENST00000497107 J3QW42 95 aa7.73□□□□□ -1.17
ITGA6-211ENST00000497107 CES1P23141 567 aa7.73□□□□□ -1.17
ITGA6-211ENST00000497107 XPCQ01831 940 aaPredicted RBP7.73□□□□□ -1.17
ITGA6-211ENST00000497107 AMOTQ4VCS5 1084 aa7.73□□□□□ -1.17
ITGA6-211ENST00000497107 CCDC30Q5VVM6 783 aa7.73□□□□□ -1.17
ITGA6-211ENST00000497107 NCAPG2Q86XI2 1143 aa7.73□□□□□ -1.17
ITGA6-211ENST00000497107 CACTIN-AS1Q8N1I8 211 aa7.73□□□□□ -1.17
ITGA6-211ENST00000497107 USHBP1Q8N6Y0 703 aa7.73□□□□□ -1.17
ITGA6-211ENST00000497107 IL17REQ8NFR9 667 aa7.73□□□□□ -1.17
ITGA6-211ENST00000497107 PLD4Q96BZ4 506 aa7.73□□□□□ -1.17
ITGA6-211ENST00000497107 MIS18AQ9NYP9 233 aa7.73□□□□□ -1.17
ITGA6-211ENST00000497107 PHRF1Q9P1Y6 1649 aaKnown RBP7.73□□□□□ -1.17
ITGA6-211ENST00000497107 MST1RQ04912 1400 aa7.72□□□□□ -1.17
ITGA6-211ENST00000497107 A6NHS1 94 aa7.72□□□□□ -1.17
ITGA6-211ENST00000497107 PHACTR2O75167 634 aa7.72□□□□□ -1.17
ITGA6-211ENST00000497107 TNFRSF21O75509 655 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms