RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 ARMT1Q9H993 441 aa23.66■■□□□ 1.38
COL20A1-208ENST00000496810 POTEFA5A3E0 1075 aa23.65■■□□□ 1.38
COL20A1-208ENST00000496810 PSMC4P43686 418 aa23.65■■□□□ 1.38
COL20A1-208ENST00000496810 TMED8Q6PL24 325 aaPredicted RBP23.65■■□□□ 1.38
COL20A1-208ENST00000496810 CERS3Q8IU89 383 aa23.65■■□□□ 1.38
COL20A1-208ENST00000496810 SLC45A1Q9Y2W3 748 aa23.65■■□□□ 1.38
COL20A1-208ENST00000496810 MBD4O95243 580 aa23.64■■□□□ 1.37
COL20A1-208ENST00000496810 ASNSP08243 561 aa23.64■■□□□ 1.37
COL20A1-208ENST00000496810 CYP2D6P10635 497 aa23.64■■□□□ 1.37
COL20A1-208ENST00000496810 KIF22Q14807 665 aa23.64■■□□□ 1.37
COL20A1-208ENST00000496810 SERPINB13Q9UIV8 391 aa23.64■■□□□ 1.37
COL20A1-208ENST00000496810 SMIM22K7EJ46 135 aa23.63■■□□□ 1.37
COL20A1-208ENST00000496810 PRKAB2O43741 272 aa23.63■■□□□ 1.37
COL20A1-208ENST00000496810 GH2P01242 217 aa23.63■■□□□ 1.37
COL20A1-208ENST00000496810 OSBPP22059 807 aa23.63■■□□□ 1.37
COL20A1-208ENST00000496810 SHMT1P34896 483 aa23.63■■□□□ 1.37
COL20A1-208ENST00000496810 PROCA1Q8NCQ7 364 aaPredicted RBP23.63■■□□□ 1.37
COL20A1-208ENST00000496810 OTUD7AQ8TE49 926 aaPredicted RBP23.63■■□□□ 1.37
COL20A1-208ENST00000496810 SH3TC2Q8TF17 1288 aa23.63■■□□□ 1.37
COL20A1-208ENST00000496810 ZNF333Q96JL9 665 aa23.63■■□□□ 1.37
COL20A1-208ENST00000496810 WDR18Q9BV38 432 aa23.63■■□□□ 1.37
COL20A1-208ENST00000496810 CRNKL1Q9BZJ0 848 aaKnown RBP23.63■■□□□ 1.37
COL20A1-208ENST00000496810 EHD4Q9H223 541 aa23.63■■□□□ 1.37
COL20A1-208ENST00000496810 ECHDC1Q9NTX5 307 aa23.63■■□□□ 1.37
COL20A1-208ENST00000496810 SLC9C1Q4G0N8 1177 aa23.62■■□□□ 1.37
COL20A1-208ENST00000496810 SH3D19Q5HYK7 790 aa23.62■■□□□ 1.37
COL20A1-208ENST00000496810 TATDN1Q6P1N9 297 aa23.62■■□□□ 1.37
COL20A1-208ENST00000496810 SMCR8Q8TEV9 937 aaPredicted RBP23.62■■□□□ 1.37
COL20A1-208ENST00000496810 DCP1AQ9NPI6 582 aaPredicted RBP23.62■■□□□ 1.37
COL20A1-208ENST00000496810 MYCP01106 439 aaPredicted RBP23.61■■□□□ 1.37
COL20A1-208ENST00000496810 TBC1D2Q9BYX2 928 aa23.61■■□□□ 1.37
COL20A1-208ENST00000496810 AS3MTQ9HBK9 375 aa23.61■■□□□ 1.37
COL20A1-208ENST00000496810 MCM9Q9NXL9 1143 aa23.61■■□□□ 1.37
COL20A1-208ENST00000496810 FMNL1O95466 1100 aaPredicted RBP23.6■■□□□ 1.37
COL20A1-208ENST00000496810 BACE1P56817 501 aa23.6■■□□□ 1.37
COL20A1-208ENST00000496810 GABPAQ06546 454 aa23.6■■□□□ 1.37
COL20A1-208ENST00000496810 ARHGEF6Q15052 776 aa23.6■■□□□ 1.37
COL20A1-208ENST00000496810 ANKRD13CQ8N6S4 541 aa23.6■■□□□ 1.37
COL20A1-208ENST00000496810 SLC44A5Q8NCS7 719 aa23.6■■□□□ 1.37
COL20A1-208ENST00000496810 ASCC2Q9H1I8 757 aaPredicted RBP23.6■■□□□ 1.37
COL20A1-208ENST00000496810 SRRDQ9UH36 339 aa23.6■■□□□ 1.37
COL20A1-208ENST00000496810 PLXNB2O15031 1838 aa23.6■■□□□ 1.37
COL20A1-208ENST00000496810 MYPNQ86TC9 1320 aa23.59■■□□□ 1.37
COL20A1-208ENST00000496810 PEX10O60683 326 aa23.59■■□□□ 1.37
COL20A1-208ENST00000496810 POLR3DP05423 398 aaPredicted RBP23.59■■□□□ 1.37
COL20A1-208ENST00000496810 PRKCZQ05513 592 aa23.59■■□□□ 1.37
COL20A1-208ENST00000496810 TTC6Q86TZ1 520 aa23.59■■□□□ 1.37
COL20A1-208ENST00000496810 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.59■■□□□ 1.37
COL20A1-208ENST00000496810 GABRQQ9UN88 632 aa23.59■■□□□ 1.37
COL20A1-208ENST00000496810 CYP2D7A0A087X1C5 515 aa23.58■■□□□ 1.37
COL20A1-208ENST00000496810 PUS7LQ9H0K6 701 aaKnown RBP23.58■■□□□ 1.37
COL20A1-208ENST00000496810 GNRH1P01148 92 aa23.57■■□□□ 1.36
COL20A1-208ENST00000496810 GUCY1A2P33402 732 aa23.57■■□□□ 1.36
COL20A1-208ENST00000496810 FCGRTP55899 365 aa23.57■■□□□ 1.36
COL20A1-208ENST00000496810 UBE3CQ15386 1083 aa23.57■■□□□ 1.36
COL20A1-208ENST00000496810 DYNLL2Q96FJ2 89 aa23.57■■□□□ 1.36
COL20A1-208ENST00000496810 EMILIN3Q9NT22 766 aa23.57■■□□□ 1.36
COL20A1-208ENST00000496810 PNMA3Q9UL41 463 aa23.57■■□□□ 1.36
COL20A1-208ENST00000496810 USP17L10C9JJH3 530 aa23.56■■□□□ 1.36
COL20A1-208ENST00000496810 RAB3GAP1Q15042 981 aa23.56■■□□□ 1.36
COL20A1-208ENST00000496810 ZYXQ15942 572 aaKnown RBP23.56■■□□□ 1.36
COL20A1-208ENST00000496810 CERKLQ49MI3 558 aaPredicted RBP23.56■■□□□ 1.36
COL20A1-208ENST00000496810 ACER1Q8TDN7 264 aa23.56■■□□□ 1.36
COL20A1-208ENST00000496810 GINM1Q9NU53 330 aa23.56■■□□□ 1.36
COL20A1-208ENST00000496810 EN2P19622 333 aaPredicted RBP23.55■■□□□ 1.36
COL20A1-208ENST00000496810 FAM110CQ1W6H9 321 aa23.55■■□□□ 1.36
COL20A1-208ENST00000496810 ABCB5Q2M3G0 1257 aa23.55■■□□□ 1.36
COL20A1-208ENST00000496810 PI4K2BQ8TCG2 481 aa23.55■■□□□ 1.36
COL20A1-208ENST00000496810 TMOD4Q9NZQ9 345 aa23.55■■□□□ 1.36
COL20A1-208ENST00000496810 PRMT2P55345 433 aa23.54■■□□□ 1.36
COL20A1-208ENST00000496810 MTFR1Q15390 333 aa23.54■■□□□ 1.36
COL20A1-208ENST00000496810 POTEEQ6S8J3 1075 aa23.54■■□□□ 1.36
COL20A1-208ENST00000496810 CLEC10AQ8IUN9 316 aa23.54■■□□□ 1.36
COL20A1-208ENST00000496810 KBTBD3Q8NAB2 608 aa23.54■■□□□ 1.36
COL20A1-208ENST00000496810 GPATCH3Q96I76 525 aa23.54■■□□□ 1.36
COL20A1-208ENST00000496810 GREB1LQ9C091 1923 aaPredicted RBP23.53■■□□□ 1.36
COL20A1-208ENST00000496810 SEPT2Q15019 361 aa23.53■■□□□ 1.36
COL20A1-208ENST00000496810 RAET1EQ8TD07 263 aa23.53■■□□□ 1.36
COL20A1-208ENST00000496810 TXNRD2Q9NNW7 524 aa23.53■■□□□ 1.36
COL20A1-208ENST00000496810 SALL3Q9BXA9 1300 aa23.53■■□□□ 1.36
COL20A1-208ENST00000496810 RLFQ13129 1914 aa23.53■■□□□ 1.36
COL20A1-208ENST00000496810 PARP14Q460N5 1801 aa23.52■■□□□ 1.36
COL20A1-208ENST00000496810 C19orf81C9J6K1 198 aa23.52■■□□□ 1.36
COL20A1-208ENST00000496810 TNPO2O14787 897 aaKnown RBP23.52■■□□□ 1.36
COL20A1-208ENST00000496810 HOXA7P31268 230 aaPredicted RBP23.52■■□□□ 1.36
COL20A1-208ENST00000496810 IRX3P78415 501 aaPredicted RBP23.52■■□□□ 1.36
COL20A1-208ENST00000496810 PABPC4Q13310 644 aaKnown RBP eCLIP23.52■■□□□ 1.36
COL20A1-208ENST00000496810 OSBP2Q969R2 916 aa23.52■■□□□ 1.36
COL20A1-208ENST00000496810 P2RX7Q99572 595 aaKnown RBP23.52■■□□□ 1.36
COL20A1-208ENST00000496810 FEZ1Q99689 392 aa23.52■■□□□ 1.36
COL20A1-208ENST00000496810 ATP8A2Q9NTI2 1148 aa23.52■■□□□ 1.36
COL20A1-208ENST00000496810 SLC4A4Q9Y6R1 1079 aa23.52■■□□□ 1.36
COL20A1-208ENST00000496810 USP17L12C9JPN9 530 aa23.51■■□□□ 1.35
COL20A1-208ENST00000496810 USP17L21D6R901 530 aa23.51■■□□□ 1.35
COL20A1-208ENST00000496810 GCLCP48506 637 aaPredicted RBP23.51■■□□□ 1.35
COL20A1-208ENST00000496810 FLT3LGP49771 235 aa23.51■■□□□ 1.35
COL20A1-208ENST00000496810 HERVK_113P62684 666 aa23.51■■□□□ 1.35
COL20A1-208ENST00000496810 NBPF11Q86T75 865 aa23.51■■□□□ 1.35
COL20A1-208ENST00000496810 A0A0G2JMZ2 1700 aa23.5■■□□□ 1.35
COL20A1-208ENST00000496810 A0A1W2PRG0 241 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms