RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 TXNDC2Q86VQ3 553 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 ARHGEF25Q86VW2 580 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 CTNNBL1Q8WYA6 563 aaPredicted RBP9.81□□□□□ -0.84
MACF1-224ENST00000496804 THOC1Q96FV9 657 aaKnown RBP9.81□□□□□ -0.84
MACF1-224ENST00000496804 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.81□□□□□ -0.844e-6■■■□□ 15.6
MACF1-224ENST00000496804 AKAP2Q9Y2D5 859 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 ZNF518AQ6AHZ1 1483 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 ATP5DP30049 168 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 CCDC25Q86WR0 208 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 PHF23Q9BUL5 403 aaPredicted RBP9.81□□□□□ -0.84
MACF1-224ENST00000496804 SNRKQ9NRH2 765 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 CCDC194A0A1B0GVG4 234 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 DRP2Q13474 957 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 SWT1Q5T5J6 900 aaKnown RBP9.81□□□□□ -0.84
MACF1-224ENST00000496804 SOGA3Q5TF21 947 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 PIK3R5Q8WYR1 880 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 MAP4K1Q92918 833 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 SMC6Q96SB8 1091 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 NOC4LQ9BVI4 516 aaKnown RBP9.81□□□□□ -0.84
MACF1-224ENST00000496804 MAPK8IP1Q9UQF2 711 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 A0A1W2PP64 1363 aa9.81□□□□□ -0.84
MACF1-224ENST00000496804 CTTNBP2Q8WZ74 1663 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 NUTM2BA6NNL0 878 aaPredicted RBP9.8□□□□□ -0.84
MACF1-224ENST00000496804 NUTM2EB1AL46 878 aaPredicted RBP9.8□□□□□ -0.84
MACF1-224ENST00000496804 HMGB1P1B2RPK0 211 aaPredicted RBP9.8□□□□□ -0.84
MACF1-224ENST00000496804 RASSF2P50749 326 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 TRIM31Q9BZY9 425 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 SCOCQ9UIL1 159 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 TMEM232C9JQI7 657 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 RXRAP19793 462 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 RTN1Q16799 776 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 FAM133BQ5BKY9 247 aaKnown RBP9.8□□□□□ -0.84
MACF1-224ENST00000496804 NLRP14Q86W24 1093 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 SSH3Q8TE77 659 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 NBPF3Q9H094 633 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 CHPF2Q9P2E5 772 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 KLHL14Q9P2G3 628 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 RGS16O15492 202 aaPredicted RBP9.8□□□□□ -0.84
MACF1-224ENST00000496804 USP14P54578 494 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 TRAF1Q13077 416 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 LINC00301Q8NCQ3 95 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 RAPGEF4Q8WZA2 1011 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 MCUR1Q96AQ8 359 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 OSBPL9Q96SU4 736 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 LARSQ9P2J5 1176 aaKnown RBP9.8□□□□□ -0.84
MACF1-224ENST00000496804 DENND4BO75064 1496 aaPredicted RBP9.8□□□□□ -0.84
MACF1-224ENST00000496804 CEP104O60308 925 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 ZRANB2O95218 330 aaKnown RBP eCLIP9.8□□□□□ -0.841e-8■■■■■ 30.3
MACF1-224ENST00000496804 KRT40Q6A162 431 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 GSPT2Q8IYD1 628 aaKnown RBP9.8□□□□□ -0.84
MACF1-224ENST00000496804 TCHPQ9BT92 498 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 USH1CQ9Y6N9 552 aa9.8□□□□□ -0.84
MACF1-224ENST00000496804 PTCH1Q13635 1447 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 TTC21BQ7Z4L5 1316 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 GRM8O00222 908 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 NBPF6Q5VWK0 638 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 NBPF5PQ86XG9 351 aaPredicted RBP9.79□□□□□ -0.84
MACF1-224ENST00000496804 NBPF4Q96M43 638 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 FAM167BQ9BTA0 163 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 GOLPH3LQ9H4A5 285 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 SUGCTQ9HAC7 445 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 POLR3EQ9NVU0 708 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 PAG1Q9NWQ8 432 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 AK9Q5TCS8 1911 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 SHANK2Q9UPX8 1470 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 ACTN4O43707 911 aaKnown RBP9.79□□□□□ -0.84
MACF1-224ENST00000496804 CTNND1O60716 968 aaKnown RBP9.79□□□□□ -0.84
MACF1-224ENST00000496804 BEND6Q5SZJ8 279 aaPredicted RBP9.79□□□□□ -0.84
MACF1-224ENST00000496804 FOXR1Q6PIV2 292 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 HVCN1Q96D96 273 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 EPB41L5Q9HCM4 733 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 CFAP74Q9C0B2 1584 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 A0A0D9SFI3 127 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 VWA3AA6NCI4 1184 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 ZNF131P52739 623 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 SESN3P58005 492 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 DYNC1I2Q13409 638 aaKnown RBP9.79□□□□□ -0.84
MACF1-224ENST00000496804 RIN2Q8WYP3 895 aaPredicted RBP9.79□□□□□ -0.84
MACF1-224ENST00000496804 ZNF274Q96GC6 653 aaPredicted RBP9.79□□□□□ -0.84
MACF1-224ENST00000496804 CALML4Q96GE6 196 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 KDM5AP29375 1690 aaKnown RBP9.79□□□□□ -0.84
MACF1-224ENST00000496804 SASH3O75995 380 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 SUN1O94901 812 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 HEXIM1O94992 359 aaKnown RBP9.79□□□□□ -0.84
MACF1-224ENST00000496804 ERCC5P28715 1186 aaPredicted RBP9.79□□□□□ -0.84
MACF1-224ENST00000496804 ASIC1P78348 528 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 CABP5Q9NP86 173 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 ADGRG1Q9Y653 693 aa9.79□□□□□ -0.84
MACF1-224ENST00000496804 KCNJ18B7U540 433 aa9.78□□□□□ -0.84
MACF1-224ENST00000496804 EXOC5O00471 708 aa9.78□□□□□ -0.84
MACF1-224ENST00000496804 FLOT1O75955 427 aa9.78□□□□□ -0.84
MACF1-224ENST00000496804 PAX7P23759 505 aa9.78□□□□□ -0.84
MACF1-224ENST00000496804 CETN2P41208 172 aa9.78□□□□□ -0.84
MACF1-224ENST00000496804 PRPHP41219 470 aa9.78□□□□□ -0.84
MACF1-224ENST00000496804 KCNJ12Q14500 433 aa9.78□□□□□ -0.84
MACF1-224ENST00000496804 DENND2CQ68D51 928 aa9.78□□□□□ -0.84
MACF1-224ENST00000496804 LRRN4CLQ8ND94 238 aa9.78□□□□□ -0.84
MACF1-224ENST00000496804 ENOX1Q8TC92 643 aaKnown RBP9.78□□□□□ -0.84
MACF1-224ENST00000496804 NELFBQ8WX92 580 aa9.78□□□□□ -0.84
MACF1-224ENST00000496804 RNF41Q9H4P4 317 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms