RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 MYOZ2Q9NPC6 264 aa19.8■□□□□ 0.76
LMNA-216ENST00000496738 ZNF70Q9UC06 446 aaPredicted RBP19.8■□□□□ 0.76
LMNA-216ENST00000496738 SLC12A7Q9Y666 1083 aa19.8■□□□□ 0.76
LMNA-216ENST00000496738 NBPF9Q3BBW0 867 aa19.79■□□□□ 0.76
LMNA-216ENST00000496738 SH3BP5LQ7L8J4 393 aa19.79■□□□□ 0.76
LMNA-216ENST00000496738 MICALL2Q8IY33 904 aa19.79■□□□□ 0.76
LMNA-216ENST00000496738 FAM196BA6NMK8 535 aa19.78■□□□□ 0.76
LMNA-216ENST00000496738 CTDNEP1O95476 244 aa19.78■□□□□ 0.76
LMNA-216ENST00000496738 HLA-DOAP06340 250 aa19.78■□□□□ 0.76
LMNA-216ENST00000496738 TSPY3P0CV98 308 aa19.78■□□□□ 0.76
LMNA-216ENST00000496738 TSPY8P0CW00 308 aa19.78■□□□□ 0.76
LMNA-216ENST00000496738 SGMS1Q86VZ5 419 aa19.78■□□□□ 0.76
LMNA-216ENST00000496738 TMOD2Q9NZR1 351 aa19.78■□□□□ 0.76
LMNA-216ENST00000496738 SCAF8Q9UPN6 1271 aaKnown RBP19.78■□□□□ 0.76
LMNA-216ENST00000496738 METAP2P50579 478 aaKnown RBP eCLIP19.78■□□□□ 0.76
LMNA-216ENST00000496738 RAB3GAP1Q15042 981 aa19.78■□□□□ 0.76
LMNA-216ENST00000496738 ZBTB43O43298 467 aa19.77■□□□□ 0.76
LMNA-216ENST00000496738 IFIT1BQ5T764 474 aaKnown RBP19.77■□□□□ 0.76
LMNA-216ENST00000496738 RNF181Q9P0P0 153 aa19.77■□□□□ 0.76
LMNA-216ENST00000496738 SERPINB13Q9UIV8 391 aa19.77■□□□□ 0.76
LMNA-216ENST00000496738 ZDHHC9Q9Y397 364 aa19.77■□□□□ 0.76
LMNA-216ENST00000496738 WNT10BO00744 389 aa19.77■□□□□ 0.76
LMNA-216ENST00000496738 RPS12P25398 132 aaKnown RBP19.77■□□□□ 0.76
LMNA-216ENST00000496738 SAMD7Q7Z3H4 446 aa19.77■□□□□ 0.76
LMNA-216ENST00000496738 NSUN7Q8NE18 718 aaKnown RBP19.77■□□□□ 0.76
LMNA-216ENST00000496738 NUP133Q8WUM0 1156 aa19.77■□□□□ 0.76
LMNA-216ENST00000496738 ZNF287Q9HBT7 754 aa19.77■□□□□ 0.76
LMNA-216ENST00000496738 IL17RBQ9NRM6 502 aa19.77■□□□□ 0.76
LMNA-216ENST00000496738 SBF1O95248 1867 aa19.77■□□□□ 0.76
LMNA-216ENST00000496738 PTPDC1A2A3K4 754 aa19.76■□□□□ 0.75
LMNA-216ENST00000496738 GOLGA8AA7E2F4 631 aa19.76■□□□□ 0.75
LMNA-216ENST00000496738 GABPAQ06546 454 aa19.76■□□□□ 0.75
LMNA-216ENST00000496738 SPDYE2Q495Y8 402 aa19.76■□□□□ 0.75
LMNA-216ENST00000496738 TNPO1Q92973 898 aaKnown RBP19.76■□□□□ 0.75
LMNA-216ENST00000496738 CNOT7Q9UIV1 285 aaKnown RBP19.76■□□□□ 0.75
LMNA-216ENST00000496738 CDC27P30260 824 aa19.76■□□□□ 0.75
LMNA-216ENST00000496738 TBC1D10BQ4KMP7 808 aaPredicted RBP19.76■□□□□ 0.75
LMNA-216ENST00000496738 SYNE3Q6ZMZ3 975 aa19.76■□□□□ 0.75
LMNA-216ENST00000496738 ZNF654Q8IZM8 581 aa19.76■□□□□ 0.75
LMNA-216ENST00000496738 CRACR2BQ8N4Y2 399 aaPredicted RBP19.76■□□□□ 0.75
LMNA-216ENST00000496738 MTA3Q9BTC8 594 aa19.76■□□□□ 0.75
LMNA-216ENST00000496738 SIPA1L1O43166 1804 aa19.76■□□□□ 0.75
LMNA-216ENST00000496738 ADD1P35611 737 aaKnown RBP19.75■□□□□ 0.75
LMNA-216ENST00000496738 FOSBP53539 338 aa19.75■□□□□ 0.75
LMNA-216ENST00000496738 NUCB2P80303 420 aa19.75■□□□□ 0.75
LMNA-216ENST00000496738 DICER1Q9UPY3 1922 aaKnown RBP19.75■□□□□ 0.75
LMNA-216ENST00000496738 CPLX1O14810 134 aa19.75■□□□□ 0.75
LMNA-216ENST00000496738 SYT1P21579 422 aa19.75■□□□□ 0.75
LMNA-216ENST00000496738 ZNF280AP59817 542 aaPredicted RBP19.75■□□□□ 0.75
LMNA-216ENST00000496738 MTMR14Q8NCE2 650 aa19.75■□□□□ 0.75
LMNA-216ENST00000496738 CHMP4CQ96CF2 233 aa19.75■□□□□ 0.75
LMNA-216ENST00000496738 DHX36Q9H2U1 1008 aaKnown RBP19.75■□□□□ 0.75
LMNA-216ENST00000496738 DNAJC18Q9H819 358 aa19.75■□□□□ 0.75
LMNA-216ENST00000496738 MYO1BO43795 1136 aa19.74■□□□□ 0.75
LMNA-216ENST00000496738 ENTPD3O75355 529 aa19.74■□□□□ 0.75
LMNA-216ENST00000496738 GPR162Q16538 588 aa19.74■□□□□ 0.75
LMNA-216ENST00000496738 TMTC2Q8N394 836 aa19.74■□□□□ 0.75
LMNA-216ENST00000496738 ZBED3Q96IU2 234 aaPredicted RBP19.74■□□□□ 0.75
LMNA-216ENST00000496738 ASTN2O75129 1339 aaPredicted RBP19.74■□□□□ 0.75
LMNA-216ENST00000496738 SHMT1P34896 483 aa19.74■□□□□ 0.75
LMNA-216ENST00000496738 TAOK2Q9UL54 1235 aa19.74■□□□□ 0.75
LMNA-216ENST00000496738 CNTNAP1P78357 1384 aa19.74■□□□□ 0.75
LMNA-216ENST00000496738 AKR1B1P15121 316 aa19.73■□□□□ 0.75
LMNA-216ENST00000496738 RCSD1Q6JBY9 416 aa19.73■□□□□ 0.75
LMNA-216ENST00000496738 CDAN1Q8IWY9 1227 aa19.73■□□□□ 0.75
LMNA-216ENST00000496738 SMARCC2Q8TAQ2 1214 aa19.73■□□□□ 0.75
LMNA-216ENST00000496738 CSRNP1Q96S65 589 aa19.73■□□□□ 0.75
LMNA-216ENST00000496738 LLPHQ9BRT6 129 aaKnown RBP19.73■□□□□ 0.75
LMNA-216ENST00000496738 TRIM34Q9BYJ4 488 aa19.73■□□□□ 0.75
LMNA-216ENST00000496738 PI4KBQ9UBF8 816 aa19.73■□□□□ 0.75
LMNA-216ENST00000496738 VPS37CA5D8V6 355 aaPredicted RBP19.73■□□□□ 0.75
LMNA-216ENST00000496738 NPM3O75607 178 aaKnown RBP19.73■□□□□ 0.75
LMNA-216ENST00000496738 C9orf131Q5VYM1 1079 aa19.73■□□□□ 0.75
LMNA-216ENST00000496738 CLEC10AQ8IUN9 316 aa19.73■□□□□ 0.75
LMNA-216ENST00000496738 DPF2Q92785 391 aa19.73■□□□□ 0.75
LMNA-216ENST00000496738 TMEM39BQ9GZU3 492 aa19.73■□□□□ 0.75
LMNA-216ENST00000496738 FAM217BQ9NTX9 383 aaPredicted RBP19.73■□□□□ 0.75
LMNA-216ENST00000496738 STX8Q9UNK0 236 aa19.73■□□□□ 0.75
LMNA-216ENST00000496738 MYH8P13535 1937 aa19.72■□□□□ 0.75
LMNA-216ENST00000496738 STX6O43752 255 aa19.72■□□□□ 0.75
LMNA-216ENST00000496738 LARP1BQ659C4 914 aaKnown RBP19.72■□□□□ 0.75
LMNA-216ENST00000496738 CATIPQ7Z7H3 387 aa19.72■□□□□ 0.75
LMNA-216ENST00000496738 CMTR1Q8N1G2 835 aaKnown RBP19.72■□□□□ 0.75
LMNA-216ENST00000496738 FAM184AQ8NB25 1140 aa19.72■□□□□ 0.75
LMNA-216ENST00000496738 CHAMP1Q96JM3 812 aa19.72■□□□□ 0.75
LMNA-216ENST00000496738 EHD4Q9H223 541 aa19.72■□□□□ 0.75
LMNA-216ENST00000496738 SWAP70Q9UH65 585 aa19.72■□□□□ 0.75
LMNA-216ENST00000496738 MTMR7Q9Y216 660 aa19.72■□□□□ 0.75
LMNA-216ENST00000496738 MPHOSPH10O00566 681 aaKnown RBP19.72■□□□□ 0.75
LMNA-216ENST00000496738 DHX16O60231 1041 aaKnown RBP19.72■□□□□ 0.75
LMNA-216ENST00000496738 NFKBIBQ15653 356 aa19.72■□□□□ 0.75
LMNA-216ENST00000496738 SHROOM1Q2M3G4 852 aaPredicted RBP19.72■□□□□ 0.75
LMNA-216ENST00000496738 KIF4BQ2VIQ3 1234 aa19.72■□□□□ 0.75
LMNA-216ENST00000496738 DDNO94850 711 aaPredicted RBP19.71■□□□□ 0.75
LMNA-216ENST00000496738 BRD1O95696 1058 aa19.71■□□□□ 0.75
LMNA-216ENST00000496738 RTN1Q16799 776 aa19.71■□□□□ 0.75
LMNA-216ENST00000496738 FOXD4L6Q3SYB3 417 aaPredicted RBP19.71■□□□□ 0.75
LMNA-216ENST00000496738 FOXD4L3Q6VB84 417 aaPredicted RBP19.71■□□□□ 0.75
LMNA-216ENST00000496738 GPC2Q8N158 579 aa19.71■□□□□ 0.75
LMNA-216ENST00000496738 CCDC82Q8N4S0 544 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms