RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SIK1P57059 783 aa10.27□□□□□ -0.77
HPS4-217ENST00000496385 SKOR1P84550 965 aa10.27□□□□□ -0.77
HPS4-217ENST00000496385 TAF7Q15545 349 aaPredicted RBP10.27□□□□□ -0.77
HPS4-217ENST00000496385 ZNF790Q6PG37 636 aa10.27□□□□□ -0.77
HPS4-217ENST00000496385 NBPF5PQ86XG9 351 aaPredicted RBP10.27□□□□□ -0.77
HPS4-217ENST00000496385 TTC5Q8N0Z6 440 aa10.27□□□□□ -0.77
HPS4-217ENST00000496385 SH3GL2Q99962 352 aa10.27□□□□□ -0.77
HPS4-217ENST00000496385 TSPYL4Q9UJ04 414 aa10.27□□□□□ -0.77
HPS4-217ENST00000496385 NEDD4P46934 1319 aa10.27□□□□□ -0.77
HPS4-217ENST00000496385 ZC3H4Q9UPT8 1303 aaKnown RBP10.27□□□□□ -0.77
HPS4-217ENST00000496385 GOLGA6CA6NDK9 693 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 SRRM3A6NNA2 597 aaPredicted RBP10.26□□□□□ -0.77
HPS4-217ENST00000496385 F6X3S4 739 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 GOLGA6DP0CG33 693 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 PIP4K2AP48426 406 aaPredicted RBP10.26□□□□□ -0.77
HPS4-217ENST00000496385 ITPK1Q13572 414 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 RCSD1Q6JBY9 416 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 TOGARAM2Q6ZUX3 1019 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 BRAPQ7Z569 592 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 CCDC125Q86Z20 511 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 RUBCNQ92622 972 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 CRACR2AQ9BSW2 395 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 SPATS2LQ9NUQ6 558 aaKnown RBP10.26□□□□□ -0.77
HPS4-217ENST00000496385 GOLGA6AQ9NYA3 693 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 TTF2Q9UNY4 1162 aaKnown RBP10.26□□□□□ -0.77
HPS4-217ENST00000496385 ADAMTS7Q9UKP4 1686 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 RASSF9O75901 435 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 EZRP15311 586 aaKnown RBP10.26□□□□□ -0.77
HPS4-217ENST00000496385 TMEM132AQ24JP5 1023 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 AP1ARQ63HQ0 302 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 WWC2Q6AWC2 1192 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 G2E3Q7L622 706 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 TAX1BP1Q86VP1 789 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 NAPGQ99747 312 aaPredicted RBP10.26□□□□□ -0.77
HPS4-217ENST00000496385 ECHDC1Q9NTX5 307 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 PLSCR1O15162 318 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 RHOXF2BP0C7M4 288 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 ATP1A3P13637 1013 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 SLC8A1P32418 973 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 CDR1P51861 262 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 NDUFA8P51970 172 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 USP14P54578 494 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 RWDD2BP57060 319 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 CEP85LQ5SZL2 805 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 OLFM4Q6UX06 510 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 MAB21L3Q8N8X9 362 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 NECTIN2Q92692 538 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 DPF2Q92785 391 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 TATDN2Q93075 761 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 FMNL2Q96PY5 1086 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 RHOXF2Q9BQY4 288 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 ZSWIM4Q9H7M6 989 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 VCPKMTQ9H867 229 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 ATP6V0A4Q9HBG4 840 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 SH3BP1Q9Y3L3 701 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 ADGRG1Q9Y653 693 aa10.26□□□□□ -0.77
HPS4-217ENST00000496385 MRC1P22897 1456 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 SIPA1L3O60292 1781 aaPredicted RBP10.25□□□□□ -0.77
HPS4-217ENST00000496385 A0A087WWV3 80 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 TTC36A6NLP5 189 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 OPA1O60313 960 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 JAK2O60674 1132 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 NBPF7P0C2Y1 421 aaPredicted RBP10.25□□□□□ -0.77
HPS4-217ENST00000496385 CEBPZQ03701 1054 aaKnown RBP10.25□□□□□ -0.77
HPS4-217ENST00000496385 NAIF1Q69YI7 327 aaPredicted RBP10.25□□□□□ -0.77
HPS4-217ENST00000496385 RASGRP2Q7LDG7 609 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 KIAA1328Q86T90 577 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 DNAJC10Q8IXB1 793 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 ELOA2Q8IYF1 753 aaPredicted RBP10.25□□□□□ -0.77
HPS4-217ENST00000496385 ACTR5Q9H9F9 607 aaPredicted RBP10.25□□□□□ -0.77
HPS4-217ENST00000496385 POLR3EQ9NVU0 708 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 ETAA1Q9NY74 926 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 GRIN2DO15399 1336 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 ZNF202O95125 648 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 EPB41P11171 864 aaKnown RBP10.25□□□□□ -0.77
HPS4-217ENST00000496385 PAX7P23759 505 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 CMA1P23946 247 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 ACTN3Q08043 901 aaPredicted RBP10.25□□□□□ -0.77
HPS4-217ENST00000496385 IFFO1Q0D2I5 559 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 TBC1D8BQ0IIM8 1120 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 FLIIQ13045 1269 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 USPL1Q5W0Q7 1092 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.25□□□□□ -0.77
HPS4-217ENST00000496385 CLASRPQ8N2M8 674 aaKnown RBP10.25□□□□□ -0.77
HPS4-217ENST00000496385 LINC00301Q8NCQ3 95 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 LINC00116Q8NCU8 138 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 USP44Q9H0E7 712 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 HOMER3Q9NSC5 361 aa10.25□□□□□ -0.77
HPS4-217ENST00000496385 ALDH1L1O75891 902 aa10.24□□□□□ -0.77
HPS4-217ENST00000496385 AMIGO3Q86WK7 504 aa10.24□□□□□ -0.77
HPS4-217ENST00000496385 TCP11Q8WWU5 503 aa10.24□□□□□ -0.77
HPS4-217ENST00000496385 TEX13AQ9BXU3 409 aaPredicted RBP10.24□□□□□ -0.77
HPS4-217ENST00000496385 PDGFDQ9GZP0 370 aaPredicted RBP10.24□□□□□ -0.77
HPS4-217ENST00000496385 MRPL44Q9H9J2 332 aaKnown RBP10.24□□□□□ -0.77
HPS4-217ENST00000496385 GOLGA6L7A0A1B0GV03 622 aa10.24□□□□□ -0.77
HPS4-217ENST00000496385 A0A1B0GVL5 298 aa10.24□□□□□ -0.77
HPS4-217ENST00000496385 PES1O00541 588 aaKnown RBP10.24□□□□□ -0.77
HPS4-217ENST00000496385 HMGB1P09429 215 aaKnown RBP10.24□□□□□ -0.77
HPS4-217ENST00000496385 INHBEP58166 350 aa10.24□□□□□ -0.77
HPS4-217ENST00000496385 GNGT1P63211 74 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms