RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 SH3D19Q5HYK7 790 aa14.3□□□□□ -0.12
THBS3-208ENST00000496332 TSHZ3Q63HK5 1081 aa14.3□□□□□ -0.12
THBS3-208ENST00000496332 ZSCAN25Q6NSZ9 544 aa14.3□□□□□ -0.12
THBS3-208ENST00000496332 TATDN1Q6P1N9 297 aa14.3□□□□□ -0.12
THBS3-208ENST00000496332 SMCR8Q8TEV9 937 aaPredicted RBP14.3□□□□□ -0.12
THBS3-208ENST00000496332 SDR42E1Q8WUS8 393 aa14.3□□□□□ -0.12
THBS3-208ENST00000496332 TRIM47Q96LD4 638 aa14.3□□□□□ -0.12
THBS3-208ENST00000496332 MCM9Q9NXL9 1143 aa14.3□□□□□ -0.12
THBS3-208ENST00000496332 CENPFP49454 3210 aa14.29□□□□□ -0.12
THBS3-208ENST00000496332 PRKAB2O43741 272 aa14.29□□□□□ -0.12
THBS3-208ENST00000496332 GH2P01242 217 aa14.29□□□□□ -0.12
THBS3-208ENST00000496332 BACE1P56817 501 aa14.29□□□□□ -0.12
THBS3-208ENST00000496332 PABPC4Q13310 644 aaKnown RBP eCLIP14.29□□□□□ -0.12
THBS3-208ENST00000496332 MTMR2Q13614 643 aa14.29□□□□□ -0.12
THBS3-208ENST00000496332 ARMC5Q96C12 935 aa14.29□□□□□ -0.12
THBS3-208ENST00000496332 DCP1AQ9NPI6 582 aaPredicted RBP14.29□□□□□ -0.12
THBS3-208ENST00000496332 PNMA3Q9UL41 463 aa14.29□□□□□ -0.12
THBS3-208ENST00000496332 USP17L10C9JJH3 530 aa14.28□□□□□ -0.12
THBS3-208ENST00000496332 OSBPP22059 807 aa14.28□□□□□ -0.12
THBS3-208ENST00000496332 HOXD10P28358 340 aa14.28□□□□□ -0.12
THBS3-208ENST00000496332 SHMT1P34896 483 aa14.28□□□□□ -0.12
THBS3-208ENST00000496332 PRMT2P55345 433 aa14.28□□□□□ -0.12
THBS3-208ENST00000496332 EVX2Q03828 476 aa14.28□□□□□ -0.12
THBS3-208ENST00000496332 CERKLQ49MI3 558 aaPredicted RBP14.28□□□□□ -0.12
THBS3-208ENST00000496332 SLC9C1Q4G0N8 1177 aa14.28□□□□□ -0.12
THBS3-208ENST00000496332 TMOD4Q9NZQ9 345 aa14.28□□□□□ -0.12
THBS3-208ENST00000496332 MYH1P12882 1939 aa14.27□□□□□ -0.12
THBS3-208ENST00000496332 ATAD5Q96QE3 1844 aa14.27□□□□□ -0.12
THBS3-208ENST00000496332 C19orf81C9J6K1 198 aa14.27□□□□□ -0.13
THBS3-208ENST00000496332 CYP2D6P10635 497 aa14.27□□□□□ -0.13
THBS3-208ENST00000496332 FCGRTP55899 365 aa14.27□□□□□ -0.13
THBS3-208ENST00000496332 GABPAQ06546 454 aa14.27□□□□□ -0.13
THBS3-208ENST00000496332 ABCB5Q2M3G0 1257 aa14.27□□□□□ -0.13
THBS3-208ENST00000496332 NBPF11Q86T75 865 aa14.27□□□□□ -0.13
THBS3-208ENST00000496332 ANKRD13CQ8N6S4 541 aa14.27□□□□□ -0.13
THBS3-208ENST00000496332 PUS7LQ9H0K6 701 aaKnown RBP14.27□□□□□ -0.13
THBS3-208ENST00000496332 ASCC2Q9H1I8 757 aaPredicted RBP14.27□□□□□ -0.13
THBS3-208ENST00000496332 ATP8A2Q9NTI2 1148 aa14.27□□□□□ -0.13
THBS3-208ENST00000496332 SRRDQ9UH36 339 aa14.27□□□□□ -0.13
THBS3-208ENST00000496332 PTPRFP10586 1907 aa14.27□□□□□ -0.13
THBS3-208ENST00000496332 ZSWIM8A7E2V4 1837 aa14.27□□□□□ -0.13
THBS3-208ENST00000496332 RAB3GAP1Q15042 981 aa14.26□□□□□ -0.13
THBS3-208ENST00000496332 KBTBD3Q8NAB2 608 aa14.26□□□□□ -0.13
THBS3-208ENST00000496332 OTUD7AQ8TE49 926 aaPredicted RBP14.26□□□□□ -0.13
THBS3-208ENST00000496332 SH3TC2Q8TF17 1288 aa14.26□□□□□ -0.13
THBS3-208ENST00000496332 ZNF333Q96JL9 665 aa14.26□□□□□ -0.13
THBS3-208ENST00000496332 CABP5Q9NP86 173 aa14.26□□□□□ -0.13
THBS3-208ENST00000496332 SLC4A4Q9Y6R1 1079 aa14.26□□□□□ -0.13
THBS3-208ENST00000496332 TTC41PQ6P2S7 1318 aa14.25□□□□□ -0.13
THBS3-208ENST00000496332 MYPNQ86TC9 1320 aa14.25□□□□□ -0.13
THBS3-208ENST00000496332 TNRC18O15417 2968 aaPredicted RBP14.25□□□□□ -0.13
THBS3-208ENST00000496332 HOXA7P31268 230 aaPredicted RBP14.25□□□□□ -0.13
THBS3-208ENST00000496332 GCLCP48506 637 aaPredicted RBP14.25□□□□□ -0.13
THBS3-208ENST00000496332 HDAC1Q13547 482 aaPredicted RBP14.25□□□□□ -0.13
THBS3-208ENST00000496332 ANKRD45Q5TZF3 282 aa14.25□□□□□ -0.13
THBS3-208ENST00000496332 USP17L2Q6R6M4 530 aa14.25□□□□□ -0.13
THBS3-208ENST00000496332 RAET1EQ8TD07 263 aa14.25□□□□□ -0.13
THBS3-208ENST00000496332 EMILIN3Q9NT22 766 aa14.25□□□□□ -0.13
THBS3-208ENST00000496332 LOC285556D6RIA3 1793 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 DDX60LQ5H9U9 1706 aaKnown RBP14.24□□□□□ -0.13
THBS3-208ENST00000496332 POTEFA5A3E0 1075 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 MPHOSPH10O00566 681 aaKnown RBP14.24□□□□□ -0.13
THBS3-208ENST00000496332 ERC2O15083 957 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 RNF113AO15541 343 aaKnown RBP14.24□□□□□ -0.13
THBS3-208ENST00000496332 MYCP01106 439 aaPredicted RBP14.24□□□□□ -0.13
THBS3-208ENST00000496332 GUCY1A2P33402 732 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 IRX3P78415 501 aaPredicted RBP14.24□□□□□ -0.13
THBS3-208ENST00000496332 PRKCZQ05513 592 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 ZYXQ15942 572 aaKnown RBP14.24□□□□□ -0.13
THBS3-208ENST00000496332 FAM110CQ1W6H9 321 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 SLC44A5Q8NCS7 719 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 PI4K2BQ8TCG2 481 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 ACER1Q8TDN7 264 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 GCC1Q96CN9 775 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 DYNLL2Q96FJ2 89 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 DDRGK1Q96HY6 314 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 P2RX7Q99572 595 aaKnown RBP14.24□□□□□ -0.13
THBS3-208ENST00000496332 FEZ1Q99689 392 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 TMEM106CQ9BVX2 250 aa14.24□□□□□ -0.13
THBS3-208ENST00000496332 ZBTB47Q9UFB7 747 aaPredicted RBP14.24□□□□□ -0.13
THBS3-208ENST00000496332 NAV1Q8NEY1 1877 aa14.23□□□□□ -0.13
THBS3-208ENST00000496332 CYP2D7A0A087X1C5 515 aa14.23□□□□□ -0.13
THBS3-208ENST00000496332 USP17L12C9JPN9 530 aa14.23□□□□□ -0.13
THBS3-208ENST00000496332 USP17L21D6R901 530 aa14.23□□□□□ -0.13
THBS3-208ENST00000496332 TNPO2O14787 897 aaKnown RBP14.23□□□□□ -0.13
THBS3-208ENST00000496332 GLRX3O76003 335 aaKnown RBP14.23□□□□□ -0.13
THBS3-208ENST00000496332 MX1P20591 662 aa14.23□□□□□ -0.13
THBS3-208ENST00000496332 AAMPQ13685 434 aa14.23□□□□□ -0.13
THBS3-208ENST00000496332 SEPT2Q15019 361 aa14.23□□□□□ -0.13
THBS3-208ENST00000496332 C12orf60Q5U649 245 aa14.23□□□□□ -0.13
THBS3-208ENST00000496332 AMOTL1Q8IY63 956 aa14.23□□□□□ -0.13
THBS3-208ENST00000496332 OSBP2Q969R2 916 aa14.23□□□□□ -0.13
THBS3-208ENST00000496332 STRBPQ96SI9 672 aaKnown RBP14.23□□□□□ -0.13
THBS3-208ENST00000496332 SWAP70Q9UH65 585 aa14.23□□□□□ -0.13
THBS3-208ENST00000496332 TAOK2Q9UL54 1235 aa14.23□□□□□ -0.13
THBS3-208ENST00000496332 GABRQQ9UN88 632 aa14.23□□□□□ -0.13
THBS3-208ENST00000496332 BRCA2P51587 3418 aa14.22□□□□□ -0.13
THBS3-208ENST00000496332 SMIM22K7EJ46 135 aa14.22□□□□□ -0.13
THBS3-208ENST00000496332 ZFYP08048 801 aaPredicted RBP14.22□□□□□ -0.13
THBS3-208ENST00000496332 GRK4P32298 578 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms