RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 USP46P62068 366 aa6.27□□□□□ -1.41
XPA-204ENST00000496104 WASHC4Q2M389 1173 aa6.27□□□□□ -1.41
XPA-204ENST00000496104 C9orf50Q5SZB4 431 aa6.27□□□□□ -1.41
XPA-204ENST00000496104 SUSD4Q5VX71 490 aa6.27□□□□□ -1.41
XPA-204ENST00000496104 ANKS1AQ92625 1134 aa6.27□□□□□ -1.41
XPA-204ENST00000496104 RBM17Q96I25 401 aaKnown RBP6.27□□□□□ -1.41
XPA-204ENST00000496104 DEFB118Q96PH6 123 aa6.27□□□□□ -1.41
XPA-204ENST00000496104 ZBTB3Q9H5J0 574 aa6.27□□□□□ -1.41
XPA-204ENST00000496104 AOX1Q06278 1338 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 MGAMO43451 1857 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 CARNS1A5YM72 827 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 TLR2O60603 784 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 NCLP19338 710 aaKnown RBP6.26□□□□□ -1.41
XPA-204ENST00000496104 GUCA2AQ02747 115 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 PRKCZQ05513 592 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 TAF1CQ15572 869 aaPredicted RBP6.26□□□□□ -1.41
XPA-204ENST00000496104 Q3C1V9 767 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 ZNF790Q6PG37 636 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 KRTAP1-3Q8IUG1 177 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 EPS8L1Q8TE68 723 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 LRRN4Q8WUT4 740 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 ZBED3Q96IU2 234 aaPredicted RBP6.26□□□□□ -1.41
XPA-204ENST00000496104 CNTNAP3BQ96NU0 1288 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 UCN2Q96RP3 112 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 CNTNAP3Q9BZ76 1288 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 THEGQ9P2T0 379 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 GABRQQ9UN88 632 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 CEMIPQ8WUJ3 1361 aa6.26□□□□□ -1.41
XPA-204ENST00000496104 CFAP99D6REC4 459 aa6.25□□□□□ -1.41
XPA-204ENST00000496104 PRMT2P55345 433 aa6.25□□□□□ -1.41
XPA-204ENST00000496104 SHHQ15465 462 aa6.25□□□□□ -1.41
XPA-204ENST00000496104 ZNF385CQ66K41 422 aaPredicted RBP6.25□□□□□ -1.41
XPA-204ENST00000496104 KANK3Q6NY19 840 aa6.25□□□□□ -1.41
XPA-204ENST00000496104 C17orf99Q6UX52 265 aa6.25□□□□□ -1.41
XPA-204ENST00000496104 ARMC9Q7Z3E5 817 aa6.25□□□□□ -1.41
XPA-204ENST00000496104 NECAB2Q7Z6G3 386 aa6.25□□□□□ -1.41
XPA-204ENST00000496104 SLC10A4Q96EP9 437 aa6.25□□□□□ -1.41
XPA-204ENST00000496104 FBXL18Q96ME1 805 aa6.25□□□□□ -1.41
XPA-204ENST00000496104 USB1Q9BQ65 265 aaKnown RBP6.25□□□□□ -1.41
XPA-204ENST00000496104 ZNF652Q9Y2D9 606 aa6.25□□□□□ -1.41
XPA-204ENST00000496104 LRRC37A2A6NM11 1700 aa6.25□□□□□ -1.41
XPA-204ENST00000496104 MYPNQ86TC9 1320 aa6.25□□□□□ -1.41
XPA-204ENST00000496104 NCOR2Q9Y618 2525 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 PALM3A6NDB9 673 aaPredicted RBP6.24□□□□□ -1.41
XPA-204ENST00000496104 SASH1O94885 1247 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 INHAP05111 366 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 COL6A1P12109 1028 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 ELNP15502 786 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 RFX1P22670 979 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 MRPS5P82675 430 aaKnown RBP6.24□□□□□ -1.41
XPA-204ENST00000496104 VAC14Q08AM6 782 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 ADGRE1Q14246 886 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 LRRC26Q2I0M4 334 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 SND1Q7KZF4 910 aaKnown RBP eCLIP6.24□□□□□ -1.41
XPA-204ENST00000496104 SVOPQ8N4V2 548 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 AGBL3Q8NEM8 1001 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 PRR7Q8TB68 274 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 MXD3Q9BW11 206 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 CD320Q9NPF0 282 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 TRIOO75962 3097 aa6.24□□□□□ -1.41
XPA-204ENST00000496104 SETXQ7Z333 2677 aaKnown RBP6.23□□□□□ -1.41
XPA-204ENST00000496104 COL1A1P02452 1464 aaPredicted RBP6.23□□□□□ -1.41
XPA-204ENST00000496104 MAN1A2O60476 641 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 GNRH1P01148 92 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 TFRCP02786 760 aaKnown RBP6.23□□□□□ -1.41
XPA-204ENST00000496104 GPTP24298 496 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 PSMC4P43686 418 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 KCNQ1P51787 676 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 GPSM2P81274 684 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 SMAD3P84022 425 aaKnown RBP6.23□□□□□ -1.41
XPA-204ENST00000496104 TFF2Q03403 129 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 MTHFSDQ2M296 383 aaKnown RBP6.23□□□□□ -1.41
XPA-204ENST00000496104 SULT6B1Q6IMI4 303 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 PODNQ7Z5L7 613 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 ZNF34Q8IZ26 560 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 GPR161Q8N6U8 529 aaKnown RBP6.23□□□□□ -1.41
XPA-204ENST00000496104 IL17REQ8NFR9 667 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 OPTNQ96CV9 577 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 ZFYVE28Q9HCC9 887 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 TFIP11Q9UBB9 837 aaKnown RBP6.23□□□□□ -1.41
XPA-204ENST00000496104 TPRP12270 2363 aaKnown RBP6.23□□□□□ -1.41
XPA-204ENST00000496104 DOCK3Q8IZD9 2030 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 DMXL1Q9Y485 3027 aa6.23□□□□□ -1.41
XPA-204ENST00000496104 CCL15-CCL14A0A0B4J2E2 113 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 BTBD19C9JJ37 291 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 SMIM22K7EJ46 135 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 USP2O75604 605 aaPredicted RBP6.22□□□□□ -1.41
XPA-204ENST00000496104 BBOX1O75936 387 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 ATG7O95352 703 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 GTF2E1P29083 439 aaPredicted RBP6.22□□□□□ -1.41
XPA-204ENST00000496104 GRAPQ13588 217 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 MTMR2Q13614 643 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 KCTD2Q14681 263 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 CCL15Q16663 113 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 SLC10A5Q5PT55 438 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.22□□□□□ -1.41
XPA-204ENST00000496104 TTLL7Q6ZT98 887 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 GRAPLQ8TC17 118 aaPredicted RBP6.22□□□□□ -1.41
XPA-204ENST00000496104 RAET1EQ8TD07 263 aa6.22□□□□□ -1.41
XPA-204ENST00000496104 TEX13AQ9BXU3 409 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms