RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 USP6NLQ92738 828 aa10.78□□□□□ -0.68
SORT1-208ENST00000495777 P2RX7Q99572 595 aaKnown RBP10.78□□□□□ -0.68
SORT1-208ENST00000495777 NOL10Q9BSC4 688 aaKnown RBP10.78□□□□□ -0.68
SORT1-208ENST00000495777 TXNRD2Q9NNW7 524 aa10.78□□□□□ -0.68
SORT1-208ENST00000495777 AATFQ9NY61 560 aaKnown RBP eCLIP10.78□□□□□ -0.68
SORT1-208ENST00000495777 STAP2Q9UGK3 403 aa10.78□□□□□ -0.68
SORT1-208ENST00000495777 OGDHLQ9ULD0 1010 aa10.78□□□□□ -0.68
SORT1-208ENST00000495777 FPGT-TNNI3KV9GXZ4 949 aa10.78□□□□□ -0.68
SORT1-208ENST00000495777 USP17L10C9JJH3 530 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 BCAR3O75815 825 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 HERVK_113P62684 666 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 IRX3P78415 501 aaPredicted RBP10.77□□□□□ -0.69
SORT1-208ENST00000495777 SHROOM1Q2M3G4 852 aaPredicted RBP10.77□□□□□ -0.69
SORT1-208ENST00000495777 POTEEQ6S8J3 1075 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 MAPKAPK5Q8IW41 473 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 GPRC5AQ8NFJ5 357 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 SSH3Q8TE77 659 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 TGFBRAP1Q8WUH2 860 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 DBNDD2Q9BQY9 259 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 NBPF3Q9H094 633 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 CHMP4BQ9H444 224 aaKnown RBP10.77□□□□□ -0.69
SORT1-208ENST00000495777 SNRKQ9NRH2 765 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 TMOD4Q9NZQ9 345 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 RBPJLQ9UBG7 517 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 ZBTB21Q9ULJ3 1066 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 SIPA1L1O43166 1804 aa10.77□□□□□ -0.69
SORT1-208ENST00000495777 MAST2Q6P0Q8 1798 aa10.76□□□□□ -0.69
SORT1-208ENST00000495777 MAPK4P31152 587 aa10.76□□□□□ -0.69
SORT1-208ENST00000495777 CCDC158Q5M9N0 1113 aa10.76□□□□□ -0.69
SORT1-208ENST00000495777 TTC39AQ5SRH9 613 aa10.76□□□□□ -0.69
SORT1-208ENST00000495777 ZKSCAN2Q63HK3 967 aa10.76□□□□□ -0.69
SORT1-208ENST00000495777 GPR153Q6NV75 609 aa10.76□□□□□ -0.69
SORT1-208ENST00000495777 TRMT44Q8IYL2 757 aaKnown RBP10.76□□□□□ -0.69
SORT1-208ENST00000495777 GTF3C2Q8WUA4 911 aaPredicted RBP10.76□□□□□ -0.69
SORT1-208ENST00000495777 LRCH3Q96II8 777 aa10.76□□□□□ -0.69
SORT1-208ENST00000495777 C12orf42Q96LP6 360 aa10.76□□□□□ -0.69
SORT1-208ENST00000495777 NUDT12Q9BQG2 462 aa10.76□□□□□ -0.69
SORT1-208ENST00000495777 C11orf49Q9H6J7 331 aa10.76□□□□□ -0.69
SORT1-208ENST00000495777 PIH1D3Q9NQM4 214 aaKnown RBP10.76□□□□□ -0.69
SORT1-208ENST00000495777 EMILIN3Q9NT22 766 aa10.76□□□□□ -0.69
SORT1-208ENST00000495777 PALD1Q9ULE6 856 aa10.76□□□□□ -0.69
SORT1-208ENST00000495777 NOP58Q9Y2X3 529 aaKnown RBP10.76□□□□□ -0.69
SORT1-208ENST00000495777 COL6A3P12111 3177 aa10.76□□□□□ -0.69
SORT1-208ENST00000495777 PEX10O60683 326 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 GDF11O95390 407 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 COL6A1P12109 1028 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 PRKAR2AP13861 404 aaKnown RBP10.75□□□□□ -0.69
SORT1-208ENST00000495777 CYP2B6P20813 491 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 ZAP70P43403 619 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 ERVK-9P63128 1117 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 ERVK-24P63145 666 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 ATP8B2P98198 1209 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 PDE3AQ14432 1141 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 Q3C1V9 767 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 MORN1Q5T089 497 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 TATDN1Q6P1N9 297 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 C7orf61Q8IZ16 206 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 CRACR2BQ8N4Y2 399 aaPredicted RBP10.75□□□□□ -0.69
SORT1-208ENST00000495777 TMEM57Q8N5G2 664 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 FRAT1Q92837 279 aaPredicted RBP10.75□□□□□ -0.69
SORT1-208ENST00000495777 CLUAP1Q96AJ1 413 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 PORCNQ9H237 461 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 DBNLQ9UJU6 430 aaKnown RBP10.75□□□□□ -0.69
SORT1-208ENST00000495777 PFASO15067 1338 aa10.75□□□□□ -0.69
SORT1-208ENST00000495777 PLXNB2O15031 1838 aa10.74□□□□□ -0.69
SORT1-208ENST00000495777 HLA-DOAP06340 250 aa10.74□□□□□ -0.69
SORT1-208ENST00000495777 ZKSCAN1P17029 563 aaPredicted RBP10.74□□□□□ -0.69
SORT1-208ENST00000495777 DYNLL1P63167 89 aaKnown RBP10.74□□□□□ -0.69
SORT1-208ENST00000495777 CACNB2Q08289 660 aaPredicted RBP10.74□□□□□ -0.69
SORT1-208ENST00000495777 LRIT3Q3SXY7 679 aa10.74□□□□□ -0.69
SORT1-208ENST00000495777 LHX8Q68G74 356 aa10.74□□□□□ -0.69
SORT1-208ENST00000495777 USP17L2Q6R6M4 530 aa10.74□□□□□ -0.69
SORT1-208ENST00000495777 GPR142Q7Z601 462 aa10.74□□□□□ -0.69
SORT1-208ENST00000495777 CERS3Q8IU89 383 aa10.74□□□□□ -0.69
SORT1-208ENST00000495777 FTSJ3Q8IY81 847 aaKnown RBP10.74□□□□□ -0.69
SORT1-208ENST00000495777 EHD4Q9H223 541 aa10.74□□□□□ -0.69
SORT1-208ENST00000495777 ZMYND8Q9ULU4 1186 aaPredicted RBP10.74□□□□□ -0.69
SORT1-208ENST00000495777 ATAD5Q96QE3 1844 aa10.74□□□□□ -0.69
SORT1-208ENST00000495777 DOCK3Q8IZD9 2030 aa10.74□□□□□ -0.69
SORT1-208ENST00000495777 A0A0C4DFX4 3053 aa10.73□□□□□ -0.69
SORT1-208ENST00000495777 SURF6O75683 361 aaKnown RBP10.73□□□□□ -0.69
SORT1-208ENST00000495777 CNMDO75829 334 aa10.73□□□□□ -0.69
SORT1-208ENST00000495777 GH2P01242 217 aa10.73□□□□□ -0.69
SORT1-208ENST00000495777 RGS2P41220 211 aa10.73□□□□□ -0.69
SORT1-208ENST00000495777 MAGEA10P43363 369 aaPredicted RBP10.73□□□□□ -0.69
SORT1-208ENST00000495777 RRP1P56182 461 aaKnown RBP10.73□□□□□ -0.69
SORT1-208ENST00000495777 AAMPQ13685 434 aa10.73□□□□□ -0.69
SORT1-208ENST00000495777 TMED8Q6PL24 325 aaPredicted RBP10.73□□□□□ -0.69
SORT1-208ENST00000495777 LBX2Q6XYB7 198 aa10.73□□□□□ -0.69
SORT1-208ENST00000495777 PLEKHH3Q7Z736 793 aa10.73□□□□□ -0.69
SORT1-208ENST00000495777 APBA2Q99767 749 aa10.73□□□□□ -0.69
SORT1-208ENST00000495777 TRIM34Q9BYJ4 488 aa10.73□□□□□ -0.69
SORT1-208ENST00000495777 TLR7Q9NYK1 1049 aaKnown RBP10.73□□□□□ -0.69
SORT1-208ENST00000495777 SAP30BPQ9UHR5 308 aaKnown RBP10.73□□□□□ -0.69
SORT1-208ENST00000495777 RABGAP1Q9Y3P9 1069 aa10.73□□□□□ -0.69
SORT1-208ENST00000495777 ALPK3Q96L96 1907 aa10.73□□□□□ -0.69
SORT1-208ENST00000495777 USP17L15C9J2P7 530 aa10.72□□□□□ -0.69
SORT1-208ENST00000495777 USP17L13C9JLJ4 530 aa10.72□□□□□ -0.69
SORT1-208ENST00000495777 USP17L11C9JVI0 530 aa10.72□□□□□ -0.69
SORT1-208ENST00000495777 USP17L18D6R9N7 530 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms