RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 USP25Q9UHP3 1055 aa17.24■□□□□ 0.35
CHPF2-204ENST00000495645 NFIAQ12857 509 aa17.24■□□□□ 0.35
CHPF2-204ENST00000495645 SHROOM1Q2M3G4 852 aaPredicted RBP17.24■□□□□ 0.35
CHPF2-204ENST00000495645 RCSD1Q6JBY9 416 aa17.24■□□□□ 0.35
CHPF2-204ENST00000495645 BAG3O95817 575 aa17.23■□□□□ 0.35
CHPF2-204ENST00000495645 ATP2B1P20020 1258 aa17.23■□□□□ 0.35
CHPF2-204ENST00000495645 NR5A1Q13285 461 aa17.23■□□□□ 0.35
CHPF2-204ENST00000495645 NOM1Q5C9Z4 860 aaKnown RBP17.23■□□□□ 0.35
CHPF2-204ENST00000495645 SYNE3Q6ZMZ3 975 aa17.23■□□□□ 0.35
CHPF2-204ENST00000495645 OXER1Q8TDS5 423 aa17.23■□□□□ 0.35
CHPF2-204ENST00000495645 FLT1P17948 1338 aa17.23■□□□□ 0.35
CHPF2-204ENST00000495645 GPR75-ASB3A0A0A6YYF3 556 aa17.23■□□□□ 0.35
CHPF2-204ENST00000495645 EIF6P56537 245 aaKnown RBP17.23■□□□□ 0.35
CHPF2-204ENST00000495645 KIF23Q02241 960 aaPredicted RBP17.23■□□□□ 0.35
CHPF2-204ENST00000495645 TROAPQ12815 778 aa17.23■□□□□ 0.35
CHPF2-204ENST00000495645 BICD2Q8TD16 824 aa17.23■□□□□ 0.35
CHPF2-204ENST00000495645 MKNK2Q9HBH9 465 aa17.23■□□□□ 0.35
CHPF2-204ENST00000495645 STX8Q9UNK0 236 aa17.23■□□□□ 0.35
CHPF2-204ENST00000495645 SLX4Q8IY92 1834 aa17.23■□□□□ 0.35
CHPF2-204ENST00000495645 FAM205CA6NFA0 338 aa17.22■□□□□ 0.35
CHPF2-204ENST00000495645 BTBD18B2RXH4 712 aa17.22■□□□□ 0.35
CHPF2-204ENST00000495645 RRP9O43818 475 aaKnown RBP17.22■□□□□ 0.35
CHPF2-204ENST00000495645 MARCKSP29966 332 aaPredicted RBP17.22■□□□□ 0.35
CHPF2-204ENST00000495645 TCP10Q12799 353 aa17.22■□□□□ 0.35
CHPF2-204ENST00000495645 SF3B2Q13435 895 aaKnown RBP17.22■□□□□ 0.35
CHPF2-204ENST00000495645 IQCA1Q86XH1 822 aa17.22■□□□□ 0.35
CHPF2-204ENST00000495645 KLHL34Q8N239 644 aa17.22■□□□□ 0.35
CHPF2-204ENST00000495645 COA1Q9GZY4 146 aa17.22■□□□□ 0.35
CHPF2-204ENST00000495645 GOLPH3LQ9H4A5 285 aa17.22■□□□□ 0.35
CHPF2-204ENST00000495645 SCAF8Q9UPN6 1271 aaKnown RBP17.22■□□□□ 0.35
CHPF2-204ENST00000495645 ZKSCAN5Q9Y2L8 839 aa17.22■□□□□ 0.35
CHPF2-204ENST00000495645 V9GY48 417 aaPredicted RBP17.22■□□□□ 0.35
CHPF2-204ENST00000495645 GOLGA6L4A6NEF3 574 aa17.22■□□□□ 0.35
CHPF2-204ENST00000495645 GOLGA8HP0CJ92 632 aa17.22■□□□□ 0.35
CHPF2-204ENST00000495645 FAM13BQ9NYF5 915 aa17.22■□□□□ 0.35
CHPF2-204ENST00000495645 VPS54Q9P1Q0 977 aa17.22■□□□□ 0.35
CHPF2-204ENST00000495645 ARPP21Q9UBL0 812 aaPredicted RBP17.22■□□□□ 0.35
CHPF2-204ENST00000495645 STAG2Q8N3U4 1231 aa17.21■□□□□ 0.35
CHPF2-204ENST00000495645 NOL10Q9BSC4 688 aaKnown RBP17.21■□□□□ 0.35
CHPF2-204ENST00000495645 FGRP09769 529 aa17.21■□□□□ 0.35
CHPF2-204ENST00000495645 ME1P48163 572 aa17.21■□□□□ 0.35
CHPF2-204ENST00000495645 SSRP1Q08945 709 aaKnown RBP17.21■□□□□ 0.35
CHPF2-204ENST00000495645 CRACR2BQ8N4Y2 399 aaPredicted RBP17.21■□□□□ 0.35
CHPF2-204ENST00000495645 ZSCAN16Q9H4T2 348 aaPredicted RBP17.21■□□□□ 0.35
CHPF2-204ENST00000495645 MRVI1Q9Y6F6 885 aa17.21■□□□□ 0.35
CHPF2-204ENST00000495645 PPP4CP60510 307 aa17.2■□□□□ 0.34
CHPF2-204ENST00000495645 SCAND2PQ9GZW5 306 aaPredicted RBP17.2■□□□□ 0.34
CHPF2-204ENST00000495645 QSER1Q2KHR3 1735 aa17.2■□□□□ 0.34
CHPF2-204ENST00000495645 PCNTO95613 3336 aa17.2■□□□□ 0.34
CHPF2-204ENST00000495645 ECE2O60344 883 aa17.2■□□□□ 0.34
CHPF2-204ENST00000495645 BAG6P46379 1132 aa17.2■□□□□ 0.34
CHPF2-204ENST00000495645 RBM5P52756 815 aaKnown RBP eCLIP17.2■□□□□ 0.34
CHPF2-204ENST00000495645 GSTO1P78417 241 aa17.2■□□□□ 0.34
CHPF2-204ENST00000495645 SRBD1Q8N5C6 995 aaKnown RBP17.2■□□□□ 0.34
CHPF2-204ENST00000495645 TMX4Q9H1E5 349 aaPredicted RBP17.2■□□□□ 0.34
CHPF2-204ENST00000495645 DPEP1P16444 411 aa17.2■□□□□ 0.34
CHPF2-204ENST00000495645 IFNAR1P17181 557 aa17.2■□□□□ 0.34
CHPF2-204ENST00000495645 PDE4BQ07343 736 aa17.2■□□□□ 0.34
CHPF2-204ENST00000495645 EARS2Q5JPH6 523 aaKnown RBP17.2■□□□□ 0.34
CHPF2-204ENST00000495645 MYSM1Q5VVJ2 828 aa17.2■□□□□ 0.34
CHPF2-204ENST00000495645 C7orf43Q8WVR3 580 aa17.2■□□□□ 0.34
CHPF2-204ENST00000495645 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.2■□□□□ 0.34
CHPF2-204ENST00000495645 WDHD1O75717 1129 aaPredicted RBP17.19■□□□□ 0.34
CHPF2-204ENST00000495645 LDHCP07864 332 aa17.19■□□□□ 0.34
CHPF2-204ENST00000495645 RASA1P20936 1047 aa17.19■□□□□ 0.34
CHPF2-204ENST00000495645 SBK1Q52WX2 424 aa17.19■□□□□ 0.34
CHPF2-204ENST00000495645 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.19■□□□□ 0.34
CHPF2-204ENST00000495645 TTC12Q9H892 705 aaPredicted RBP17.19■□□□□ 0.34
CHPF2-204ENST00000495645 ZNF277Q9NRM2 450 aaPredicted RBP17.19■□□□□ 0.34
CHPF2-204ENST00000495645 USP40Q9NVE5 1235 aa17.19■□□□□ 0.34
CHPF2-204ENST00000495645 KIF3AQ9Y496 699 aa17.19■□□□□ 0.34
CHPF2-204ENST00000495645 FAM205AQ6ZU69 1335 aa17.19■□□□□ 0.34
CHPF2-204ENST00000495645 A0A1B0GVL5 298 aa17.19■□□□□ 0.34
CHPF2-204ENST00000495645 YDJCA8MPS7 323 aa17.19■□□□□ 0.34
CHPF2-204ENST00000495645 FMNL1O95466 1100 aaPredicted RBP17.19■□□□□ 0.34
CHPF2-204ENST00000495645 CDK8P49336 464 aa17.19■□□□□ 0.34
CHPF2-204ENST00000495645 SPECC1Q5M775 1068 aa17.19■□□□□ 0.34
CHPF2-204ENST00000495645 TSC1Q92574 1164 aa17.19■□□□□ 0.34
CHPF2-204ENST00000495645 TIAM2Q8IVF5 1701 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 ORC4O43929 436 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 RAD17O75943 681 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 TSPY3P0CV98 308 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 TSPY8P0CW00 308 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 FUT2Q10981 343 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 GNL2Q13823 731 aaKnown RBP17.18■□□□□ 0.34
CHPF2-204ENST00000495645 PKN1Q16512 942 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 APOBEC3HQ6NTF7 200 aaKnown RBP17.18■□□□□ 0.34
CHPF2-204ENST00000495645 CPLX2Q6PUV4 134 aaKnown RBP17.18■□□□□ 0.34
CHPF2-204ENST00000495645 CATIPQ7Z7H3 387 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 PCDHA7Q9UN72 937 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 LTBP1Q14766 1721 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 WNT7AO00755 349 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 SLC35G1Q2M3R5 365 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 CCDC183Q5T5S1 534 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 CDC42EP5Q6NZY7 148 aa17.18■□□□□ 0.34
CHPF2-204ENST00000495645 ZBTB12Q9Y330 459 aaPredicted RBP17.18■□□□□ 0.34
CHPF2-204ENST00000495645 ADAMTSL1Q8N6G6 1762 aa17.17■□□□□ 0.34
CHPF2-204ENST00000495645 UQCRHLA0A096LP55 91 aa17.17■□□□□ 0.34
CHPF2-204ENST00000495645 UQCRHP07919 91 aa17.17■□□□□ 0.34
CHPF2-204ENST00000495645 KCNA3P22001 575 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms