RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	GDF11	O95390	407 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	BCR	P11274	1271 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	SHMT1	P34896	483 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	RGS19	P49795	217 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	LACTB	P83111	547 aa	Predicted RBP	13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	EVX2	Q03828	476 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	GABPA	Q06546	454 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	TREML2	Q5T2D2	321 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	PI4K2B	Q8TCG2	481 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	GCC1	Q96CN9	775 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	PARK7	Q99497	189 aa	Known RBP	13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	ARHGAP39	Q9C0H5	1083 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	PUS7L	Q9H0K6	701 aa	Known RBP	13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	AS3MT	Q9HBK9	375 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	ATP8A2	Q9NTI2	1148 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	MCM9	Q9NXL9	1143 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	ZBTB21	Q9ULJ3	1066 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	AGTPBP1	Q9UPW5	1226 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	CENPF	P49454	3210 aa		13.22	□□□□□ -0.29
DCTN1-223	ENST00000495643	MGAM	O43451	1857 aa		13.21	□□□□□ -0.29
DCTN1-223	ENST00000495643	POLR3D	P05423	398 aa	Predicted RBP	13.21	□□□□□ -0.29
DCTN1-223	ENST00000495643	CTGF	P29279	349 aa		13.21	□□□□□ -0.29
DCTN1-223	ENST00000495643	HMGCS2	P54868	508 aa		13.21	□□□□□ -0.29
DCTN1-223	ENST00000495643	BACE1	P56817	501 aa		13.21	□□□□□ -0.29
DCTN1-223	ENST00000495643	ARHGEF6	Q15052	776 aa		13.21	□□□□□ -0.29
DCTN1-223	ENST00000495643	ANKRD45	Q5TZF3	282 aa		13.21	□□□□□ -0.29
DCTN1-223	ENST00000495643	EXOC6	Q8TAG9	804 aa		13.21	□□□□□ -0.29
DCTN1-223	ENST00000495643	MYH8	P13535	1937 aa		13.2	□□□□□ -0.3
DCTN1-223	ENST00000495643	ERC2	O15083	957 aa		13.2	□□□□□ -0.3
DCTN1-223	ENST00000495643	RNF113A	O15541	343 aa	Known RBP	13.2	□□□□□ -0.3
DCTN1-223	ENST00000495643	GH2	P01242	217 aa		13.2	□□□□□ -0.3
DCTN1-223	ENST00000495643	MX1	P20591	662 aa		13.2	□□□□□ -0.3
DCTN1-223	ENST00000495643	KIF22	Q14807	665 aa		13.2	□□□□□ -0.3
DCTN1-223	ENST00000495643	CERKL	Q49MI3	558 aa	Predicted RBP	13.2	□□□□□ -0.3
DCTN1-223	ENST00000495643	TNRC18	O15417	2968 aa	Predicted RBP	13.2	□□□□□ -0.3
DCTN1-223	ENST00000495643	C19orf81	C9J6K1	198 aa		13.19	□□□□□ -0.3
DCTN1-223	ENST00000495643	GLRX3	O76003	335 aa	Known RBP	13.19	□□□□□ -0.3
DCTN1-223	ENST00000495643	GNRH1	P01148	92 aa		13.19	□□□□□ -0.3
DCTN1-223	ENST00000495643	CYP2D6	P10635	497 aa		13.19	□□□□□ -0.3
DCTN1-223	ENST00000495643	MTMR2	Q13614	643 aa		13.19	□□□□□ -0.3
DCTN1-223	ENST00000495643	C12orf60	Q5U649	245 aa		13.19	□□□□□ -0.3
DCTN1-223	ENST00000495643	OSBP2	Q969R2	916 aa		13.19	□□□□□ -0.3
DCTN1-223	ENST00000495643	TRIM47	Q96LD4	638 aa		13.19	□□□□□ -0.3
DCTN1-223	ENST00000495643	STRBP	Q96SI9	672 aa	Known RBP	13.19	□□□□□ -0.3
DCTN1-223	ENST00000495643	STAP2	Q9UGK3	403 aa		13.19	□□□□□ -0.3
DCTN1-223	ENST00000495643	TAOK2	Q9UL54	1235 aa		13.19	□□□□□ -0.3
DCTN1-223	ENST00000495643	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.19	□□□□□ -0.3
DCTN1-223	ENST00000495643	SLC4A4	Q9Y6R1	1079 aa		13.19	□□□□□ -0.3
DCTN1-223	ENST00000495643	USP17L10	C9JJH3	530 aa		13.18	□□□□□ -0.3
DCTN1-223	ENST00000495643	SMIM22	K7EJ46	135 aa		13.18	□□□□□ -0.3
DCTN1-223	ENST00000495643	IGHD	P01880	384 aa		13.18	□□□□□ -0.3
DCTN1-223	ENST00000495643	ZFY	P08048	801 aa	Predicted RBP	13.18	□□□□□ -0.3
DCTN1-223	ENST00000495643	GUCY1A2	P33402	732 aa		13.18	□□□□□ -0.3
DCTN1-223	ENST00000495643	PSMC4	P43686	418 aa		13.18	□□□□□ -0.3
DCTN1-223	ENST00000495643	ABCB5	Q2M3G0	1257 aa		13.18	□□□□□ -0.3
DCTN1-223	ENST00000495643	SMC5	Q8IY18	1101 aa		13.18	□□□□□ -0.3
DCTN1-223	ENST00000495643	APPBP2	Q92624	585 aa		13.18	□□□□□ -0.3
DCTN1-223	ENST00000495643	RWDD1	Q9H446	243 aa	Predicted RBP	13.18	□□□□□ -0.3
DCTN1-223	ENST00000495643	CYP2D7	A0A087X1C5	515 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	GSG1L2	A8MUP6	293 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	USP17L12	C9JPN9	530 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	USP17L21	D6R901	530 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	HOXA7	P31268	230 aa	Predicted RBP	13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	SOX10	P56693	466 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	CTR9	Q6PD62	1173 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	SLC44A5	Q8NCS7	719 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	ARMC5	Q96C12	935 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	DYNLL2	Q96FJ2	89 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	CABP5	Q9NP86	173 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	EMILIN3	Q9NT22	766 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	TMOD4	Q9NZQ9	345 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	SWAP70	Q9UH65	585 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	PNMA3	Q9UL41	463 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643	PTCH2	Q9Y6C5	1203 aa		13.17	□□□□□ -0.3
DCTN1-223	ENST00000495643		M0R2C6	588 aa		13.16	□□□□□ -0.3
DCTN1-223	ENST00000495643	OSBP	P22059	807 aa		13.16	□□□□□ -0.3
DCTN1-223	ENST00000495643	PDE1A	P54750	535 aa		13.16	□□□□□ -0.3
DCTN1-223	ENST00000495643	PRMT2	P55345	433 aa		13.16	□□□□□ -0.3
DCTN1-223	ENST00000495643	RAB3GAP1	Q15042	981 aa		13.16	□□□□□ -0.3
DCTN1-223	ENST00000495643	GIMAP6	Q6P9H5	292 aa		13.16	□□□□□ -0.3
DCTN1-223	ENST00000495643	USP17L2	Q6R6M4	530 aa		13.16	□□□□□ -0.3
DCTN1-223	ENST00000495643	KIAA1683	Q9H0B3	1180 aa		13.16	□□□□□ -0.3
DCTN1-223	ENST00000495643	SRRD	Q9UH36	339 aa		13.16	□□□□□ -0.3
DCTN1-223	ENST00000495643	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.16	□□□□□ -0.3
DCTN1-223	ENST00000495643	GPAA1	O43292	621 aa		13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	ECM2	O94769	699 aa	Predicted RBP	13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	FMNL1	O95466	1100 aa	Predicted RBP	13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	GCLC	P48506	637 aa	Predicted RBP	13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	CDK8	P49336	464 aa		13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	SEPT2	Q15019	361 aa		13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	FAM110C	Q1W6H9	321 aa		13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	SBK1	Q52WX2	424 aa		13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	C16orf86	Q6ZW13	317 aa		13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	ANKRD13C	Q8N6S4	541 aa		13.15	□□□□□ -0.3
DCTN1-223	ENST00000495643	ACER1	Q8TDN7	264 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms