RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 LHX8Q68G74 356 aa11.64□□□□□ -0.55
GTF3C2-213ENST00000495298 GPR153Q6NV75 609 aa11.64□□□□□ -0.55
GTF3C2-213ENST00000495298 USP6NLQ92738 828 aa11.64□□□□□ -0.55
GTF3C2-213ENST00000495298 NEUROD6Q96NK8 337 aa11.64□□□□□ -0.55
GTF3C2-213ENST00000495298 UBE2OQ9C0C9 1292 aaKnown RBP11.64□□□□□ -0.55
GTF3C2-213ENST00000495298 RAI14Q9P0K7 980 aa11.64□□□□□ -0.55
GTF3C2-213ENST00000495298 RBPJLQ9UBG7 517 aa11.64□□□□□ -0.55
GTF3C2-213ENST00000495298 TNNQ9UQP3 1299 aa11.64□□□□□ -0.55
GTF3C2-213ENST00000495298 STXBP5LQ9Y2K9 1186 aa11.64□□□□□ -0.55
GTF3C2-213ENST00000495298 ARID4AP29374 1257 aaPredicted RBP11.63□□□□□ -0.55
GTF3C2-213ENST00000495298 BACE1P56817 501 aa11.63□□□□□ -0.55
GTF3C2-213ENST00000495298 IRX3P78415 501 aaPredicted RBP11.63□□□□□ -0.55
GTF3C2-213ENST00000495298 PABPC4Q13310 644 aaKnown RBP eCLIP11.63□□□□□ -0.551e-10■■■■■ 29.7
GTF3C2-213ENST00000495298 MAPKAPK5Q8IW41 473 aa11.63□□□□□ -0.55
GTF3C2-213ENST00000495298 TRMT2AQ8IZ69 625 aaKnown RBP11.63□□□□□ -0.55
GTF3C2-213ENST00000495298 GUCD1Q96NT3 240 aa11.63□□□□□ -0.55
GTF3C2-213ENST00000495298 WDR18Q9BV38 432 aa11.63□□□□□ -0.55
GTF3C2-213ENST00000495298 SNRKQ9NRH2 765 aa11.63□□□□□ -0.55
GTF3C2-213ENST00000495298 AATFQ9NY61 560 aaKnown RBP eCLIP11.63□□□□□ -0.55
GTF3C2-213ENST00000495298 LTBP2Q14767 1821 aa11.63□□□□□ -0.55
GTF3C2-213ENST00000495298 FLT1P17948 1338 aa11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 HOXA7P31268 230 aaPredicted RBP11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 MORN1Q5T089 497 aa11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 GPR142Q7Z601 462 aa11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 GPRC5AQ8NFJ5 357 aa11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 TGFBRAP1Q8WUH2 860 aa11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 NUDT12Q9BQG2 462 aa11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 PAGR1Q9BTK6 254 aa11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 COL25A1Q9BXS0 654 aaPredicted RBP11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 AS3MTQ9HBK9 375 aa11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 EMILIN3Q9NT22 766 aa11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 FLRT1Q9NZU1 646 aa11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 HERC5Q9UII4 1024 aaKnown RBP11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 NDUFB9Q9Y6M9 179 aa11.62□□□□□ -0.55
GTF3C2-213ENST00000495298 PNMA6EA0A0J9YXQ4 647 aa11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 CNMDO75829 334 aa11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 XRCC5P13010 732 aaKnown RBP11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 ZKSCAN1P17029 563 aaPredicted RBP11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 ERVK-9P63128 1117 aa11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 ERVK-24P63145 666 aa11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 GSTO1P78417 241 aa11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 MTX1Q13505 466 aa11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 SOCS4Q8WXH5 440 aa11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 FAM161BQ96MY7 647 aa11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 TBC1D2Q9BYX2 928 aa11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 PI4KBQ9UBF8 816 aa11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 SAP30BPQ9UHR5 308 aaKnown RBP11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 PALD1Q9ULE6 856 aa11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 ZBTB21Q9ULJ3 1066 aa11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 AKAP2Q9Y2D5 859 aa11.61□□□□□ -0.55
GTF3C2-213ENST00000495298 MYH1P12882 1939 aa11.6□□□□□ -0.55
GTF3C2-213ENST00000495298 LDHCP07864 332 aa11.6□□□□□ -0.55
GTF3C2-213ENST00000495298 ASNSP08243 561 aa11.6□□□□□ -0.55
GTF3C2-213ENST00000495298 METTL16Q86W50 562 aaKnown RBP11.6□□□□□ -0.55
GTF3C2-213ENST00000495298 API5Q9BZZ5 524 aaKnown RBP11.6□□□□□ -0.55
GTF3C2-213ENST00000495298 TMOD4Q9NZQ9 345 aa11.6□□□□□ -0.55
GTF3C2-213ENST00000495298 LRP2BPQ9P2M1 347 aa11.6□□□□□ -0.55
GTF3C2-213ENST00000495298 RLFQ13129 1914 aa11.6□□□□□ -0.55
GTF3C2-213ENST00000495298 MUC3AQ02505 3323 aa11.6□□□□□ -0.55
GTF3C2-213ENST00000495298 USP17L10C9JJH3 530 aa11.59□□□□□ -0.55
GTF3C2-213ENST00000495298 POTEB2H3BUK9 544 aa11.59□□□□□ -0.55
GTF3C2-213ENST00000495298 MAP4K4O95819 1239 aaPredicted RBP11.59□□□□□ -0.55
GTF3C2-213ENST00000495298 CYP2E1P05181 493 aaPredicted RBP11.59□□□□□ -0.55
GTF3C2-213ENST00000495298 MAPK4P31152 587 aa11.59□□□□□ -0.55
GTF3C2-213ENST00000495298 DYNLL1P63167 89 aaKnown RBP11.59□□□□□ -0.55
GTF3C2-213ENST00000495298 ZYXQ15942 572 aaKnown RBP11.59□□□□□ -0.55
GTF3C2-213ENST00000495298 APBA2Q99767 749 aa11.59□□□□□ -0.55
GTF3C2-213ENST00000495298 DBNDD2Q9BQY9 259 aa11.59□□□□□ -0.55
GTF3C2-213ENST00000495298 PIH1D3Q9NQM4 214 aaKnown RBP11.59□□□□□ -0.55
GTF3C2-213ENST00000495298 ZNF316A6NFI3 1004 aaPredicted RBP11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 C19orf81C9J6K1 198 aa11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 GH2P01242 217 aa11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 RGS2P41220 211 aa11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 RARSP54136 660 aaKnown RBP11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 ATN1P54259 1190 aaPredicted RBP11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 PDE3AQ14432 1141 aa11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 GORABQ5T7V8 394 aa11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 NAA16Q6N069 864 aaPredicted RBP11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 PLEKHH3Q7Z736 793 aa11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 TRPV1Q8NER1 839 aa11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 SENP6Q9GZR1 1112 aaPredicted RBP11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 DHX36Q9H2U1 1008 aaKnown RBP11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 TTC28Q96AY4 2481 aa11.58□□□□□ -0.56
GTF3C2-213ENST00000495298 GNAI3P08754 354 aa11.57□□□□□ -0.56
GTF3C2-213ENST00000495298 PPP4CP60510 307 aa11.57□□□□□ -0.56
GTF3C2-213ENST00000495298 EVX2Q03828 476 aa11.57□□□□□ -0.56
GTF3C2-213ENST00000495298 MAP2K5Q13163 448 aa11.57□□□□□ -0.56
GTF3C2-213ENST00000495298 CRACR2BQ8N4Y2 399 aaPredicted RBP11.57□□□□□ -0.56
GTF3C2-213ENST00000495298 NPLOC4Q8TAT6 608 aa11.57□□□□□ -0.56
GTF3C2-213ENST00000495298 ACER1Q8TDN7 264 aa11.57□□□□□ -0.56
GTF3C2-213ENST00000495298 TLR7Q9NYK1 1049 aaKnown RBP11.57□□□□□ -0.56
GTF3C2-213ENST00000495298 BTBD7Q9P203 1132 aa11.57□□□□□ -0.56
GTF3C2-213ENST00000495298 IGHA2P01877 340 aa11.56□□□□□ -0.56
GTF3C2-213ENST00000495298 UQCRFS1P1P0C7P4 283 aa11.56□□□□□ -0.56
GTF3C2-213ENST00000495298 CYP2C19P33261 490 aa11.56□□□□□ -0.56
GTF3C2-213ENST00000495298 ZAP70P43403 619 aa11.56□□□□□ -0.56
GTF3C2-213ENST00000495298 TNNI3KQ59H18 835 aa11.56□□□□□ -0.56
GTF3C2-213ENST00000495298 USP17L2Q6R6M4 530 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms