RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
CHMP2B-205ENST00000494980 TRIOO75962 3097 aa18.44■□□□□ 0.54
CHMP2B-205ENST00000494980 MAP3K10Q02779 954 aa18.44■□□□□ 0.54
CHMP2B-205ENST00000494980 C1orf53Q5VUE5 145 aa18.44■□□□□ 0.54
CHMP2B-205ENST00000494980 ANO1Q5XXA6 986 aa18.44■□□□□ 0.54
CHMP2B-205ENST00000494980 LMBR1LQ6UX01 489 aa18.44■□□□□ 0.54
CHMP2B-205ENST00000494980 CACNA1GO43497 2377 aa18.44■□□□□ 0.54
CHMP2B-205ENST00000494980 CACNA1BQ00975 2339 aa18.43■□□□□ 0.54
CHMP2B-205ENST00000494980 TLL1O43897 1013 aa18.43■□□□□ 0.54
CHMP2B-205ENST00000494980 HERVK_113P62684 666 aa18.43■□□□□ 0.54
CHMP2B-205ENST00000494980 ERVK-9P63128 1117 aa18.43■□□□□ 0.54
CHMP2B-205ENST00000494980 ERVK-24P63145 666 aa18.43■□□□□ 0.54
CHMP2B-205ENST00000494980 TRIM26Q12899 539 aaPredicted RBP18.43■□□□□ 0.54
CHMP2B-205ENST00000494980 CAVIN4Q5BKX8 364 aa18.43■□□□□ 0.54
CHMP2B-205ENST00000494980 C8orf58Q8NAV2 365 aa18.43■□□□□ 0.54
CHMP2B-205ENST00000494980 FBXL18Q96ME1 805 aa18.43■□□□□ 0.54
CHMP2B-205ENST00000494980 CWC22Q9HCG8 908 aaKnown RBP18.43■□□□□ 0.54
CHMP2B-205ENST00000494980 MYH2Q9UKX2 1941 aa18.43■□□□□ 0.54
CHMP2B-205ENST00000494980 CYP2C19P33261 490 aa18.42■□□□□ 0.54
CHMP2B-205ENST00000494980 Q3C1V9 767 aa18.42■□□□□ 0.54
CHMP2B-205ENST00000494980 EDC3Q96F86 508 aaKnown RBP18.42■□□□□ 0.54
CHMP2B-205ENST00000494980 MSRAQ9UJ68 235 aa18.42■□□□□ 0.54
CHMP2B-205ENST00000494980 DDTLA6NHG4 134 aaPredicted RBP18.41■□□□□ 0.54
CHMP2B-205ENST00000494980 PQBP1O60828 265 aaKnown RBP18.41■□□□□ 0.54
CHMP2B-205ENST00000494980 EPHA10Q5JZY3 1008 aa18.41■□□□□ 0.54
CHMP2B-205ENST00000494980 HERVK_113Q902F9 699 aa18.41■□□□□ 0.54
CHMP2B-205ENST00000494980 PAGR1Q9BTK6 254 aa18.41■□□□□ 0.54
CHMP2B-205ENST00000494980 PUS3Q9BZE2 481 aaKnown RBP18.41■□□□□ 0.54
CHMP2B-205ENST00000494980 NKX2-4Q9H2Z4 354 aa18.41■□□□□ 0.54
CHMP2B-205ENST00000494980 RBPJLQ9UBG7 517 aa18.41■□□□□ 0.54
CHMP2B-205ENST00000494980 NDUFB9Q9Y6M9 179 aa18.41■□□□□ 0.54
CHMP2B-205ENST00000494980 RFX7Q2KHR2 1363 aa18.41■□□□□ 0.54
CHMP2B-205ENST00000494980 ZFHX2Q9C0A1 2572 aaPredicted RBP18.4■□□□□ 0.54
CHMP2B-205ENST00000494980 ENTPD3O75355 529 aa18.4■□□□□ 0.54
CHMP2B-205ENST00000494980 ZNF853P0CG23 659 aa18.4■□□□□ 0.54
CHMP2B-205ENST00000494980 CYBAP13498 195 aa18.4■□□□□ 0.54
CHMP2B-205ENST00000494980 ATP2B2Q01814 1243 aa18.4■□□□□ 0.54
CHMP2B-205ENST00000494980 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
CHMP2B-205ENST00000494980 RAB30Q15771 203 aa18.4■□□□□ 0.54
CHMP2B-205ENST00000494980 G2E3Q7L622 706 aa18.4■□□□□ 0.54
CHMP2B-205ENST00000494980 TMEM39AQ9NV64 488 aa18.4■□□□□ 0.54
CHMP2B-205ENST00000494980 FAM196BA6NMK8 535 aa18.39■□□□□ 0.53
CHMP2B-205ENST00000494980 FOXK2Q01167 660 aa18.39■□□□□ 0.53
CHMP2B-205ENST00000494980 SH3D19Q5HYK7 790 aa18.39■□□□□ 0.53
CHMP2B-205ENST00000494980 RASIP1Q5U651 963 aa18.39■□□□□ 0.53
CHMP2B-205ENST00000494980 SLC28A3Q9HAS3 691 aa18.39■□□□□ 0.53
CHMP2B-205ENST00000494980 CD320Q9NPF0 282 aa18.39■□□□□ 0.53
CHMP2B-205ENST00000494980 LRRC41Q15345 812 aa18.38■□□□□ 0.53
CHMP2B-205ENST00000494980 LINS1Q8NG48 757 aa18.38■□□□□ 0.53
CHMP2B-205ENST00000494980 IDI2Q9BXS1 227 aa18.38■□□□□ 0.53
CHMP2B-205ENST00000494980 A0A0G2JMZ2 1700 aa18.37■□□□□ 0.53
CHMP2B-205ENST00000494980 HOXA7P31268 230 aaPredicted RBP18.37■□□□□ 0.53
CHMP2B-205ENST00000494980 ZEB1P37275 1124 aaPredicted RBP18.37■□□□□ 0.53
CHMP2B-205ENST00000494980 MTMR2Q13614 643 aa18.37■□□□□ 0.53
CHMP2B-205ENST00000494980 TMEM240Q5SV17 173 aa18.37■□□□□ 0.53
CHMP2B-205ENST00000494980 STK31Q9BXU1 1019 aa18.37■□□□□ 0.53
CHMP2B-205ENST00000494980 CHMP4AQ9BY43 222 aa18.37■□□□□ 0.53
CHMP2B-205ENST00000494980 TBC1D2Q9BYX2 928 aa18.37■□□□□ 0.53
CHMP2B-205ENST00000494980 YBX2Q9Y2T7 364 aaKnown RBP18.37■□□□□ 0.53
CHMP2B-205ENST00000494980 SMCHD1A6NHR9 2005 aa18.37■□□□□ 0.53
CHMP2B-205ENST00000494980 GLRX3O76003 335 aaKnown RBP18.36■□□□□ 0.53
CHMP2B-205ENST00000494980 PRDX5P30044 214 aa18.36■□□□□ 0.53
CHMP2B-205ENST00000494980 WDR78Q5VTH9 848 aa18.36■□□□□ 0.53
CHMP2B-205ENST00000494980 MROH5Q6ZUA9 1318 aa18.36■□□□□ 0.53
CHMP2B-205ENST00000494980 C16orf59Q7L2K0 433 aa18.36■□□□□ 0.53
CHMP2B-205ENST00000494980 SLC44A5Q8NCS7 719 aa18.36■□□□□ 0.53
CHMP2B-205ENST00000494980 NPLOC4Q8TAT6 608 aa18.36■□□□□ 0.53
CHMP2B-205ENST00000494980 PHOX2BQ99453 314 aa18.36■□□□□ 0.53
CHMP2B-205ENST00000494980 KCNH6Q9H252 994 aa18.36■□□□□ 0.53
CHMP2B-205ENST00000494980 IFT57Q9NWB7 429 aa18.36■□□□□ 0.53
CHMP2B-205ENST00000494980 COG5Q9UP83 839 aa18.36■□□□□ 0.53
CHMP2B-205ENST00000494980 USP17L5A8MUK1 530 aa18.35■□□□□ 0.53
CHMP2B-205ENST00000494980 ST18O60284 1047 aa18.35■□□□□ 0.53
CHMP2B-205ENST00000494980 CSPP1Q1MSJ5 1256 aa18.35■□□□□ 0.53
CHMP2B-205ENST00000494980 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
CHMP2B-205ENST00000494980 CCDC174Q6PII3 467 aa18.35■□□□□ 0.53
CHMP2B-205ENST00000494980 TSPYL6Q8N831 410 aa18.35■□□□□ 0.53
CHMP2B-205ENST00000494980 WDR66Q8TBY9 1149 aa18.35■□□□□ 0.53
CHMP2B-205ENST00000494980 DNAAF4Q8WXU2 420 aa18.35■□□□□ 0.53
CHMP2B-205ENST00000494980 OSBPL5Q9H0X9 879 aaPredicted RBP18.35■□□□□ 0.53
CHMP2B-205ENST00000494980 DDX4Q9NQI0 724 aaKnown RBP18.35■□□□□ 0.53
CHMP2B-205ENST00000494980 TMOD4Q9NZQ9 345 aa18.35■□□□□ 0.53
CHMP2B-205ENST00000494980 SLC15A5A6NIM6 579 aa18.34■□□□□ 0.53
CHMP2B-205ENST00000494980 SEPT4O43236 478 aa18.34■□□□□ 0.53
CHMP2B-205ENST00000494980 HOXC6P09630 235 aa18.34■□□□□ 0.53
CHMP2B-205ENST00000494980 PPIGQ13427 754 aaKnown RBP eCLIP18.34■□□□□ 0.53
CHMP2B-205ENST00000494980 PICALMQ13492 652 aa18.34■□□□□ 0.53
CHMP2B-205ENST00000494980 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.34■□□□□ 0.53
CHMP2B-205ENST00000494980 PHF24Q9UPV7 400 aa18.34■□□□□ 0.53
CHMP2B-205ENST00000494980 EPG5Q9HCE0 2579 aa18.33■□□□□ 0.52
CHMP2B-205ENST00000494980 TIMP1P01033 207 aa18.33■□□□□ 0.52
CHMP2B-205ENST00000494980 PTPREP23469 700 aa18.33■□□□□ 0.52
CHMP2B-205ENST00000494980 GNAI1P63096 354 aa18.33■□□□□ 0.52
CHMP2B-205ENST00000494980 FAAP100Q0VG06 881 aa18.33■□□□□ 0.52
CHMP2B-205ENST00000494980 FAM47AQ5JRC9 791 aa18.33■□□□□ 0.52
CHMP2B-205ENST00000494980 GTF3C2Q8WUA4 911 aaPredicted RBP18.33■□□□□ 0.52
CHMP2B-205ENST00000494980 AS3MTQ9HBK9 375 aa18.33■□□□□ 0.52
CHMP2B-205ENST00000494980 PTPRZ1P23471 2315 aaPredicted RBP18.33■□□□□ 0.52
CHMP2B-205ENST00000494980 DCHS1Q96JQ0 3298 aa18.32■□□□□ 0.52
CHMP2B-205ENST00000494980 TBC1D12O60347 775 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms