RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 C9orf131Q5VYM1 1079 aa12.94□□□□□ -0.34
PKP4-215ENST00000494945 FOXP4Q8IVH2 680 aaPredicted RBP12.94□□□□□ -0.34
PKP4-215ENST00000494945 CCDC83Q8IWF9 413 aa12.94□□□□□ -0.34
PKP4-215ENST00000494945 ZSCAN29Q8IWY8 852 aaPredicted RBP12.94□□□□□ -0.34
PKP4-215ENST00000494945 ZFPM1Q8IX07 1006 aa12.94□□□□□ -0.34
PKP4-215ENST00000494945 NECAB1Q8N987 351 aa12.94□□□□□ -0.34
PKP4-215ENST00000494945 FOXD4L1Q9NU39 408 aa12.94□□□□□ -0.34
PKP4-215ENST00000494945 TCP11L1Q9NUJ3 509 aa12.94□□□□□ -0.34
PKP4-215ENST00000494945 GPRC5DQ9NZD1 345 aa12.94□□□□□ -0.34
PKP4-215ENST00000494945 BRPF3Q9ULD4 1205 aa12.94□□□□□ -0.34
PKP4-215ENST00000494945 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
PKP4-215ENST00000494945 SHTN1A0MZ66 631 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 DDTLA6NHG4 134 aaPredicted RBP12.93□□□□□ -0.34
PKP4-215ENST00000494945 CCDC69A6NI79 296 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 GOLGA8BA8MQT2 603 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 TSPY3P0CV98 308 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 TSPY8P0CW00 308 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 ST3GAL1Q11201 340 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 TNFAIP1Q13829 316 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 NBPF9Q3BBW0 867 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 FAM47AQ5JRC9 791 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 APOA5Q6Q788 366 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 SYNE3Q6ZMZ3 975 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 NFXL1Q6ZNB6 911 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 SH3BP5LQ7L8J4 393 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 METTL16Q86W50 562 aaKnown RBP12.93□□□□□ -0.34
PKP4-215ENST00000494945 CRACR2BQ8N4Y2 399 aaPredicted RBP12.93□□□□□ -0.34
PKP4-215ENST00000494945 ENAHQ8N8S7 591 aaPredicted RBP12.93□□□□□ -0.34
PKP4-215ENST00000494945 SLC44A5Q8NCS7 719 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 NEDD1Q8NHV4 660 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 ZKSCAN3Q9BRR0 538 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 LLPHQ9BRT6 129 aaKnown RBP12.93□□□□□ -0.34
PKP4-215ENST00000494945 CHMP5Q9NZZ3 219 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 NAP1L2Q9ULW6 460 aaPredicted RBP12.93□□□□□ -0.34
PKP4-215ENST00000494945 SMC3Q9UQE7 1217 aa12.93□□□□□ -0.34
PKP4-215ENST00000494945 BAZ2BQ9UIF8 2168 aaKnown RBP12.93□□□□□ -0.34
PKP4-215ENST00000494945 TCP10L2B9ZVM9 353 aa12.92□□□□□ -0.34
PKP4-215ENST00000494945 ZBTB43O43298 467 aa12.92□□□□□ -0.34
PKP4-215ENST00000494945 DHX16O60231 1041 aaKnown RBP12.92□□□□□ -0.34
PKP4-215ENST00000494945 SHMT1P34896 483 aa12.92□□□□□ -0.34
PKP4-215ENST00000494945 SCRN1Q12765 414 aa12.92□□□□□ -0.34
PKP4-215ENST00000494945 STK3Q13188 491 aa12.92□□□□□ -0.34
PKP4-215ENST00000494945 KIF4BQ2VIQ3 1234 aa12.92□□□□□ -0.34
PKP4-215ENST00000494945 IFIT1BQ5T764 474 aaKnown RBP12.92□□□□□ -0.34
PKP4-215ENST00000494945 DGKHQ86XP1 1220 aa12.92□□□□□ -0.34
PKP4-215ENST00000494945 ANKS1AQ92625 1134 aa12.92□□□□□ -0.34
PKP4-215ENST00000494945 TRIM34Q9BYJ4 488 aa12.92□□□□□ -0.34
PKP4-215ENST00000494945 VEZTQ9HBM0 779 aa12.92□□□□□ -0.34
PKP4-215ENST00000494945 HERC5Q9UII4 1024 aaKnown RBP12.92□□□□□ -0.34
PKP4-215ENST00000494945 HPS5Q9UPZ3 1129 aa12.92□□□□□ -0.34
PKP4-215ENST00000494945 SLC12A7Q9Y666 1083 aa12.92□□□□□ -0.34
PKP4-215ENST00000494945 PHIPQ8WWQ0 1821 aa12.91□□□□□ -0.34
PKP4-215ENST00000494945 LMOD1P29536 600 aaPredicted RBP12.91□□□□□ -0.34
PKP4-215ENST00000494945 PPP2R5BQ15173 497 aa12.91□□□□□ -0.34
PKP4-215ENST00000494945 TBC1D10BQ4KMP7 808 aaPredicted RBP12.91□□□□□ -0.34
PKP4-215ENST00000494945 RBM26Q5T8P6 1007 aaKnown RBP12.91□□□□□ -0.34
PKP4-215ENST00000494945 SAMD7Q7Z3H4 446 aa12.91□□□□□ -0.34
PKP4-215ENST00000494945 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
PKP4-215ENST00000494945 CCDC17Q96LX7 622 aa12.91□□□□□ -0.34
PKP4-215ENST00000494945 CSRNP1Q96S65 589 aa12.91□□□□□ -0.34
PKP4-215ENST00000494945 SENP2Q9HC62 589 aa12.91□□□□□ -0.34
PKP4-215ENST00000494945 OTOFQ9HC10 1997 aa12.9□□□□□ -0.34
PKP4-215ENST00000494945 DDNO94850 711 aaPredicted RBP12.9□□□□□ -0.34
PKP4-215ENST00000494945 EGFRP00533 1210 aa12.9□□□□□ -0.34
PKP4-215ENST00000494945 CALM1P0DP23 149 aa12.9□□□□□ -0.34
PKP4-215ENST00000494945 CALM2P0DP24 149 aa12.9□□□□□ -0.34
PKP4-215ENST00000494945 CALM3P0DP25 149 aa12.9□□□□□ -0.34
PKP4-215ENST00000494945 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
PKP4-215ENST00000494945 METAP2P50579 478 aaKnown RBP eCLIP12.9□□□□□ -0.34
PKP4-215ENST00000494945 CCT2P78371 535 aaKnown RBP12.9□□□□□ -0.34
PKP4-215ENST00000494945 NUCB2P80303 420 aa12.9□□□□□ -0.34
PKP4-215ENST00000494945 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
PKP4-215ENST00000494945 RCSD1Q6JBY9 416 aa12.9□□□□□ -0.34
PKP4-215ENST00000494945 DPY19L2Q6NUT2 758 aa12.9□□□□□ -0.34
PKP4-215ENST00000494945 TATDN1Q6P1N9 297 aa12.9□□□□□ -0.34
PKP4-215ENST00000494945 CATIPQ7Z7H3 387 aa12.9□□□□□ -0.34
PKP4-215ENST00000494945 APOBEC3FQ8IUX4 373 aaKnown RBP12.9□□□□□ -0.34
PKP4-215ENST00000494945 IL17RBQ9NRM6 502 aa12.9□□□□□ -0.34
PKP4-215ENST00000494945 PAPPA2Q9BXP8 1791 aa12.89□□□□□ -0.35
PKP4-215ENST00000494945 GOLGA8AA7E2F4 631 aa12.89□□□□□ -0.35
PKP4-215ENST00000494945 TBC1D12O60347 775 aa12.89□□□□□ -0.35
PKP4-215ENST00000494945 NMT2O60551 498 aa12.89□□□□□ -0.35
PKP4-215ENST00000494945 CDKL5O76039 1030 aa12.89□□□□□ -0.35
PKP4-215ENST00000494945 DDAH1O94760 285 aa12.89□□□□□ -0.35
PKP4-215ENST00000494945 GJB2P29033 226 aa12.89□□□□□ -0.35
PKP4-215ENST00000494945 NOVP48745 357 aa12.89□□□□□ -0.35
PKP4-215ENST00000494945 HMGN5P82970 282 aaKnown RBP12.89□□□□□ -0.35
PKP4-215ENST00000494945 CPLX2Q6PUV4 134 aaKnown RBP12.89□□□□□ -0.35
PKP4-215ENST00000494945 MICU3Q86XE3 530 aa12.89□□□□□ -0.35
PKP4-215ENST00000494945 NSUN7Q8NE18 718 aaKnown RBP12.89□□□□□ -0.35
PKP4-215ENST00000494945 SMARCC2Q8TAQ2 1214 aa12.89□□□□□ -0.35
PKP4-215ENST00000494945 L3MBTL3Q96JM7 780 aaPredicted RBP12.89□□□□□ -0.35
PKP4-215ENST00000494945 DNAJC18Q9H819 358 aa12.89□□□□□ -0.35
PKP4-215ENST00000494945 ADARB2Q9NS39 739 aaKnown RBP12.89□□□□□ -0.35
PKP4-215ENST00000494945 PGAP2Q9UHJ9 254 aa12.89□□□□□ -0.35
PKP4-215ENST00000494945 HACL1Q9UJ83 578 aa12.89□□□□□ -0.35
PKP4-215ENST00000494945 PTPRFP10586 1907 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 IGKV6D-41A0A0C4DH26 115 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 CCDC196A0A1B0GTZ2 297 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 CPLX1O14810 134 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms