RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-222ENST00000494891 DCP1AQ9NPI6 582 aaPredicted RBP12.42□□□□□ -0.42
NEPRO-222ENST00000494891 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.42□□□□□ -0.42
NEPRO-222ENST00000494891 PNMA3Q9UL41 463 aa12.42□□□□□ -0.42
NEPRO-222ENST00000494891 ZBTB21Q9ULJ3 1066 aa12.42□□□□□ -0.42
NEPRO-222ENST00000494891 PLCD1P51178 756 aa12.41□□□□□ -0.42
NEPRO-222ENST00000494891 GADL1Q6ZQY3 521 aa12.41□□□□□ -0.42
NEPRO-222ENST00000494891 TICAM2Q86XR7 235 aa12.41□□□□□ -0.42
NEPRO-222ENST00000494891 LCORLQ8N3X6 602 aa12.41□□□□□ -0.42
NEPRO-222ENST00000494891 C12orf42Q96LP6 360 aa12.41□□□□□ -0.42
NEPRO-222ENST00000494891 CRBNQ96SW2 442 aa12.41□□□□□ -0.42
NEPRO-222ENST00000494891 SAP30BPQ9UHR5 308 aaKnown RBP12.41□□□□□ -0.42
NEPRO-222ENST00000494891 USP17L10C9JJH3 530 aa12.4□□□□□ -0.42
NEPRO-222ENST00000494891 ERC2O15083 957 aa12.4□□□□□ -0.42
NEPRO-222ENST00000494891 ZFYP08048 801 aaPredicted RBP12.4□□□□□ -0.42
NEPRO-222ENST00000494891 CYP2C8P10632 490 aa12.4□□□□□ -0.42
NEPRO-222ENST00000494891 SHMT1P34896 483 aa12.4□□□□□ -0.42
NEPRO-222ENST00000494891 GCLCP48506 637 aaPredicted RBP12.4□□□□□ -0.42
NEPRO-222ENST00000494891 HMGCS2P54868 508 aa12.4□□□□□ -0.42
NEPRO-222ENST00000494891 MLLT1Q03111 559 aaPredicted RBP12.4□□□□□ -0.42
NEPRO-222ENST00000494891 FAM110CQ1W6H9 321 aa12.4□□□□□ -0.42
NEPRO-222ENST00000494891 TREML2Q5T2D2 321 aa12.4□□□□□ -0.42
NEPRO-222ENST00000494891 GIMAP6Q6P9H5 292 aa12.4□□□□□ -0.42
NEPRO-222ENST00000494891 CCDC84Q86UT8 332 aaPredicted RBP12.4□□□□□ -0.42
NEPRO-222ENST00000494891 PI4K2BQ8TCG2 481 aa12.4□□□□□ -0.42
NEPRO-222ENST00000494891 TRIM47Q96LD4 638 aa12.4□□□□□ -0.42
NEPRO-222ENST00000494891 SWAP70Q9UH65 585 aa12.4□□□□□ -0.42
NEPRO-222ENST00000494891 CPA4Q9UI42 421 aa12.4□□□□□ -0.42
NEPRO-222ENST00000494891 MGAMO43451 1857 aa12.4□□□□□ -0.42
NEPRO-222ENST00000494891 GLRX3O76003 335 aaKnown RBP12.39□□□□□ -0.43
NEPRO-222ENST00000494891 MBD4O95243 580 aa12.39□□□□□ -0.43
NEPRO-222ENST00000494891 GDF11O95390 407 aa12.39□□□□□ -0.43
NEPRO-222ENST00000494891 HOXD10P28358 340 aa12.39□□□□□ -0.43
NEPRO-222ENST00000494891 CTGFP29279 349 aa12.39□□□□□ -0.43
NEPRO-222ENST00000494891 PSMC4P43686 418 aa12.39□□□□□ -0.43
NEPRO-222ENST00000494891 LRRFIP1Q32MZ4 808 aaKnown RBP12.39□□□□□ -0.43
NEPRO-222ENST00000494891 CERKLQ49MI3 558 aaPredicted RBP12.39□□□□□ -0.43
NEPRO-222ENST00000494891 SDR42E1Q8WUS8 393 aa12.39□□□□□ -0.43
NEPRO-222ENST00000494891 ZNF333Q96JL9 665 aa12.39□□□□□ -0.43
NEPRO-222ENST00000494891 YTHDC1Q96MU7 727 aaKnown RBP12.39□□□□□ -0.43
NEPRO-222ENST00000494891 ARHGAP39Q9C0H5 1083 aa12.39□□□□□ -0.43
NEPRO-222ENST00000494891 PUS7LQ9H0K6 701 aaKnown RBP12.39□□□□□ -0.43
NEPRO-222ENST00000494891 ARMT1Q9H993 441 aa12.39□□□□□ -0.43
NEPRO-222ENST00000494891 MCM9Q9NXL9 1143 aa12.39□□□□□ -0.43
NEPRO-222ENST00000494891 STAP2Q9UGK3 403 aa12.39□□□□□ -0.43
NEPRO-222ENST00000494891 SRRDQ9UH36 339 aa12.39□□□□□ -0.43
NEPRO-222ENST00000494891 BRCA2P51587 3418 aa12.38□□□□□ -0.43
NEPRO-222ENST00000494891 GH2P01242 217 aa12.38□□□□□ -0.43
NEPRO-222ENST00000494891 POLR3DP05423 398 aaPredicted RBP12.38□□□□□ -0.43
NEPRO-222ENST00000494891 FCGRTP55899 365 aa12.38□□□□□ -0.43
NEPRO-222ENST00000494891 MTMR2Q13614 643 aa12.38□□□□□ -0.43
NEPRO-222ENST00000494891 ABCB5Q2M3G0 1257 aa12.38□□□□□ -0.43
NEPRO-222ENST00000494891 C12orf60Q5U649 245 aa12.38□□□□□ -0.43
NEPRO-222ENST00000494891 NBPF11Q86T75 865 aa12.38□□□□□ -0.43
NEPRO-222ENST00000494891 SMCR8Q8TEV9 937 aaPredicted RBP12.38□□□□□ -0.43
NEPRO-222ENST00000494891 GTF3C2Q8WUA4 911 aaPredicted RBP12.38□□□□□ -0.43
NEPRO-222ENST00000494891 APPBP2Q92624 585 aa12.38□□□□□ -0.43
NEPRO-222ENST00000494891 STRBPQ96SI9 672 aaKnown RBP12.38□□□□□ -0.43
NEPRO-222ENST00000494891 KIAA1683Q9H0B3 1180 aa12.38□□□□□ -0.43
NEPRO-222ENST00000494891 MORF4L1Q9UBU8 362 aa12.38□□□□□ -0.43
NEPRO-222ENST00000494891 PTCH2Q9Y6C5 1203 aa12.38□□□□□ -0.43
NEPRO-222ENST00000494891 ZSWIM8A7E2V4 1837 aa12.38□□□□□ -0.43
NEPRO-222ENST00000494891 BAZ2AQ9UIF9 1905 aaKnown RBP12.37□□□□□ -0.43
NEPRO-222ENST00000494891 KIAA0100Q14667 2235 aaKnown RBP12.37□□□□□ -0.43
NEPRO-222ENST00000494891 RNF113AO15541 343 aaKnown RBP12.37□□□□□ -0.43
NEPRO-222ENST00000494891 MX1P20591 662 aa12.37□□□□□ -0.43
NEPRO-222ENST00000494891 OSBPP22059 807 aa12.37□□□□□ -0.43
NEPRO-222ENST00000494891 GUCY1A2P33402 732 aa12.37□□□□□ -0.43
NEPRO-222ENST00000494891 USP14P54578 494 aa12.37□□□□□ -0.43
NEPRO-222ENST00000494891 SHROOM1Q2M3G4 852 aaPredicted RBP12.37□□□□□ -0.43
NEPRO-222ENST00000494891 SBK1Q52WX2 424 aa12.37□□□□□ -0.43
NEPRO-222ENST00000494891 USP17L2Q6R6M4 530 aa12.37□□□□□ -0.43
NEPRO-222ENST00000494891 SMC5Q8IY18 1101 aa12.37□□□□□ -0.43
NEPRO-222ENST00000494891 CCDC17Q96LX7 622 aa12.37□□□□□ -0.43
NEPRO-222ENST00000494891 ASCC2Q9H1I8 757 aaPredicted RBP12.37□□□□□ -0.43
NEPRO-222ENST00000494891 CABP5Q9NP86 173 aa12.37□□□□□ -0.43
NEPRO-222ENST00000494891 EMILIN3Q9NT22 766 aa12.37□□□□□ -0.43
NEPRO-222ENST00000494891 TMOD4Q9NZQ9 345 aa12.37□□□□□ -0.43
NEPRO-222ENST00000494891 PRKAB2O43741 272 aa12.36□□□□□ -0.43
NEPRO-222ENST00000494891 CHGBP05060 677 aa12.36□□□□□ -0.43
NEPRO-222ENST00000494891 GNAT2P19087 354 aa12.36□□□□□ -0.43
NEPRO-222ENST00000494891 SOX10P56693 466 aa12.36□□□□□ -0.43
NEPRO-222ENST00000494891 IRF5Q13568 498 aa12.36□□□□□ -0.43
NEPRO-222ENST00000494891 SLFNL1Q499Z3 407 aa12.36□□□□□ -0.43
NEPRO-222ENST00000494891 SLC9C1Q4G0N8 1177 aa12.36□□□□□ -0.43
NEPRO-222ENST00000494891 LBX2Q6XYB7 198 aa12.36□□□□□ -0.43
NEPRO-222ENST00000494891 TMEM179Q6ZVK1 233 aa12.36□□□□□ -0.43
NEPRO-222ENST00000494891 C16orf86Q6ZW13 317 aa12.36□□□□□ -0.43
NEPRO-222ENST00000494891 OSBP2Q969R2 916 aa12.36□□□□□ -0.43
NEPRO-222ENST00000494891 DDRGK1Q96HY6 314 aa12.36□□□□□ -0.43
NEPRO-222ENST00000494891 ARPP21Q9UBL0 812 aaPredicted RBP12.36□□□□□ -0.43
NEPRO-222ENST00000494891 MKI67P46013 3256 aaKnown RBP12.35□□□□□ -0.43
NEPRO-222ENST00000494891 MYH8P13535 1937 aa12.35□□□□□ -0.43
NEPRO-222ENST00000494891 ROBO3Q96MS0 1386 aa12.35□□□□□ -0.43
NEPRO-222ENST00000494891 GSG1L2A8MUP6 293 aa12.35□□□□□ -0.43
NEPRO-222ENST00000494891 USP17L12C9JPN9 530 aa12.35□□□□□ -0.43
NEPRO-222ENST00000494891 USP17L21D6R901 530 aa12.35□□□□□ -0.43
NEPRO-222ENST00000494891 FMNL1O95466 1100 aaPredicted RBP12.35□□□□□ -0.43
NEPRO-222ENST00000494891 CAPN2P17655 700 aa12.35□□□□□ -0.43
NEPRO-222ENST00000494891 SLC4A8Q2Y0W8 1093 aa12.35□□□□□ -0.43
NEPRO-222ENST00000494891 CTR9Q6PD62 1173 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms