RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 CATIPQ7Z7H3 387 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 USP48Q86UV5 1035 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 FERMT3Q86UX7 667 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 ANKS1AQ92625 1134 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 DYNLL2Q96FJ2 89 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 MYL10Q9BUA6 226 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 MKNK2Q9HBH9 465 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 USP40Q9NVE5 1235 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 CNPY2Q9Y2B0 182 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 TSPY2A6NKD2 308 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 WDHD1O75717 1129 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-245ENST00000494862 DDAH1O94760 285 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 CALM1P0DP23 149 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 CALM2P0DP24 149 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 CALM3P0DP25 149 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 IARSP41252 1262 aaKnown RBP13.39□□□□□ -0.27
HDLBP-245ENST00000494862 KRT85P78386 507 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 TFAP4Q01664 338 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 SSRP1Q08945 709 aaKnown RBP13.39□□□□□ -0.27
HDLBP-245ENST00000494862 CDC42EP5Q6NZY7 148 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 C16orf86Q6ZW13 317 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 CCDC144CPQ8IYA2 1237 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 ZNF444Q8N0Y2 327 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-245ENST00000494862 FANCBQ8NB91 859 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 C8orf76Q96K31 380 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 TCP11L1Q9NUJ3 509 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 NAV1Q8NEY1 1877 aa13.39□□□□□ -0.27
HDLBP-245ENST00000494862 YDJCA8MPS7 323 aa13.38□□□□□ -0.27
HDLBP-245ENST00000494862 FMNL1O95466 1100 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-245ENST00000494862 NCLP19338 710 aaKnown RBP13.38□□□□□ -0.27
HDLBP-245ENST00000494862 CDK8P49336 464 aa13.38□□□□□ -0.27
HDLBP-245ENST00000494862 FOSBP53539 338 aa13.38□□□□□ -0.27
HDLBP-245ENST00000494862 SLC4A8Q2Y0W8 1093 aa13.38□□□□□ -0.27
HDLBP-245ENST00000494862 DALRD3Q5D0E6 543 aaKnown RBP13.38□□□□□ -0.27
HDLBP-245ENST00000494862 TTC6Q86TZ1 520 aa13.38□□□□□ -0.27
HDLBP-245ENST00000494862 DGKHQ86XP1 1220 aa13.38□□□□□ -0.27
HDLBP-245ENST00000494862 KIAA0825Q8IV33 1275 aa13.38□□□□□ -0.27
HDLBP-245ENST00000494862 LARGE2Q8N3Y3 721 aa13.38□□□□□ -0.27
HDLBP-245ENST00000494862 FBXO18Q8NFZ0 1043 aa13.38□□□□□ -0.27
HDLBP-245ENST00000494862 NUP133Q8WUM0 1156 aa13.38□□□□□ -0.27
HDLBP-245ENST00000494862 GDPD2Q9HCC8 539 aa13.38□□□□□ -0.27
HDLBP-245ENST00000494862 RBM28Q9NW13 759 aaKnown RBP13.38□□□□□ -0.27
HDLBP-245ENST00000494862 SERPINA10Q9UK55 444 aa13.38□□□□□ -0.27
HDLBP-245ENST00000494862 CD2APQ9Y5K6 639 aa13.38□□□□□ -0.27
HDLBP-245ENST00000494862 PPFIA3O75145 1194 aa13.37□□□□□ -0.27
HDLBP-245ENST00000494862 RASA1P20936 1047 aa13.37□□□□□ -0.27
HDLBP-245ENST00000494862 ATL3Q6DD88 541 aa13.37□□□□□ -0.27
HDLBP-245ENST00000494862 SLC44A5Q8NCS7 719 aa13.37□□□□□ -0.27
HDLBP-245ENST00000494862 GPT2Q8TD30 523 aa13.37□□□□□ -0.27
HDLBP-245ENST00000494862 WASF1Q92558 559 aa13.37□□□□□ -0.27
HDLBP-245ENST00000494862 SGIP1Q9BQI5 828 aa13.37□□□□□ -0.27
HDLBP-245ENST00000494862 ALG1Q9BT22 464 aa13.37□□□□□ -0.27
HDLBP-245ENST00000494862 OSBPL5Q9H0X9 879 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-245ENST00000494862 ZNF277Q9NRM2 450 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-245ENST00000494862 MYO3BQ8WXR4 1341 aa13.37□□□□□ -0.27
HDLBP-245ENST00000494862 DDX60LQ5H9U9 1706 aaKnown RBP13.36□□□□□ -0.27
HDLBP-245ENST00000494862 FIBPO43427 364 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 VIL1P09327 827 aaKnown RBP13.36□□□□□ -0.27
HDLBP-245ENST00000494862 TSPY3P0CV98 308 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 TSPY8P0CW00 308 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 UBE2HP62256 183 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 GUCY1B3Q02153 619 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 GABPAQ06546 454 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 TROAPQ12815 778 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 PICALMQ13492 652 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 RCSD1Q6JBY9 416 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 RSBN1LQ6PCB5 846 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-245ENST00000494862 NBPF11Q86T75 865 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 TRIM22Q8IYM9 498 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 CRACR2BQ8N4Y2 399 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-245ENST00000494862 NEDD1Q8NHV4 660 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 PHKBQ93100 1093 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 MAP3K14Q99558 947 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 SLC26A6Q9BXS9 759 aa13.36□□□□□ -0.27
HDLBP-245ENST00000494862 SCAND2PQ9GZW5 306 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-245ENST00000494862 GZF1Q9H116 711 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-245ENST00000494862 DDX4Q9NQI0 724 aaKnown RBP13.36□□□□□ -0.27
HDLBP-245ENST00000494862 SCN9AQ15858 1988 aa13.35□□□□□ -0.27
HDLBP-245ENST00000494862 NMT2O60551 498 aa13.35□□□□□ -0.27
HDLBP-245ENST00000494862 GADD45BO75293 160 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-245ENST00000494862 DEXIO95424 95 aa13.35□□□□□ -0.27
HDLBP-245ENST00000494862 DEKP35659 375 aaKnown RBP13.35□□□□□ -0.27
HDLBP-245ENST00000494862 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.27
HDLBP-245ENST00000494862 FAM173BQ6P4H8 233 aa13.35□□□□□ -0.27
HDLBP-245ENST00000494862 NIM1KQ8IY84 436 aa13.35□□□□□ -0.27
HDLBP-245ENST00000494862 ZNF396Q96N95 335 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-245ENST00000494862 IDI2Q9BXS1 227 aa13.35□□□□□ -0.27
HDLBP-245ENST00000494862 KAT14Q9H8E8 782 aa13.35□□□□□ -0.27
HDLBP-245ENST00000494862 IL17RBQ9NRM6 502 aa13.35□□□□□ -0.27
HDLBP-245ENST00000494862 SWAP70Q9UH65 585 aa13.35□□□□□ -0.27
HDLBP-245ENST00000494862 CFAP45Q9UL16 551 aa13.35□□□□□ -0.27
HDLBP-245ENST00000494862 TAOK2Q9UL54 1235 aa13.35□□□□□ -0.27
HDLBP-245ENST00000494862 ZNRF3Q9ULT6 936 aa13.35□□□□□ -0.27
HDLBP-245ENST00000494862 ELP1O95163 1332 aa13.35□□□□□ -0.27
HDLBP-245ENST00000494862 CDK5RAP2Q96SN8 1893 aa13.34□□□□□ -0.27
HDLBP-245ENST00000494862 HLA-DOAP06340 250 aa13.34□□□□□ -0.27
HDLBP-245ENST00000494862 RBM5P52756 815 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDLBP-245ENST00000494862 TRIM29Q14134 588 aa13.34□□□□□ -0.27
HDLBP-245ENST00000494862 CFAP100Q494V2 611 aa13.34□□□□□ -0.27
HDLBP-245ENST00000494862 OTUD7BQ6GQQ9 843 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms