RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 CFHR5Q9BXR6 569 aa19.1■□□□□ 0.65
LIME1-209ENST00000494776 ZFYVE28Q9HCC9 887 aa19.1■□□□□ 0.65
LIME1-209ENST00000494776 CABP5Q9NP86 173 aa19.1■□□□□ 0.65
LIME1-209ENST00000494776 A0A0G2JLL6 359 aaPredicted RBP19.09■□□□□ 0.65
LIME1-209ENST00000494776 TDO2P48775 406 aa19.09■□□□□ 0.65
LIME1-209ENST00000494776 SPP2Q13103 211 aa19.09■□□□□ 0.65
LIME1-209ENST00000494776 TATDN1Q6P1N9 297 aa19.09■□□□□ 0.65
LIME1-209ENST00000494776 PRRT2Q7Z6L0 340 aaPredicted RBP19.09■□□□□ 0.65
LIME1-209ENST00000494776 ANKRD23Q86SG2 305 aa19.09■□□□□ 0.65
LIME1-209ENST00000494776 R3HDMLQ9H3Y0 253 aa19.09■□□□□ 0.65
LIME1-209ENST00000494776 ZCCHC17Q9NP64 241 aaKnown RBP19.09■□□□□ 0.65
LIME1-209ENST00000494776 ARPP21Q9UBL0 812 aaPredicted RBP19.09■□□□□ 0.65
LIME1-209ENST00000494776 SWAP70Q9UH65 585 aa19.09■□□□□ 0.65
LIME1-209ENST00000494776 ZBTB21Q9ULJ3 1066 aa19.09■□□□□ 0.65
LIME1-209ENST00000494776 LAMB1P07942 1786 aa19.09■□□□□ 0.65
LIME1-209ENST00000494776 CYP2D7A0A087X1C5 515 aa19.08■□□□□ 0.64
LIME1-209ENST00000494776 GSG1L2A8MUP6 293 aa19.08■□□□□ 0.64
LIME1-209ENST00000494776 PDHXO00330 501 aa19.08■□□□□ 0.64
LIME1-209ENST00000494776 GH2P01242 217 aa19.08■□□□□ 0.64
LIME1-209ENST00000494776 SHMT1P34896 483 aa19.08■□□□□ 0.64
LIME1-209ENST00000494776 EVX2Q03828 476 aa19.08■□□□□ 0.64
LIME1-209ENST00000494776 ABCB5Q2M3G0 1257 aa19.08■□□□□ 0.64
LIME1-209ENST00000494776 C12orf60Q5U649 245 aa19.08■□□□□ 0.64
LIME1-209ENST00000494776 GIMAP6Q6P9H5 292 aa19.08■□□□□ 0.64
LIME1-209ENST00000494776 CTR9Q6PD62 1173 aa19.08■□□□□ 0.64
LIME1-209ENST00000494776 ZNF296Q8WUU4 475 aaPredicted RBP19.08■□□□□ 0.64
LIME1-209ENST00000494776 DYNLL2Q96FJ2 89 aa19.08■□□□□ 0.64
LIME1-209ENST00000494776 NACAP1Q9BZK3 213 aa19.08■□□□□ 0.64
LIME1-209ENST00000494776 MINDY4BA8MYZ0 360 aa19.07■□□□□ 0.64
LIME1-209ENST00000494776 PATL2C9JE40 543 aaKnown RBP19.07■□□□□ 0.64
LIME1-209ENST00000494776 MPHOSPH10O00566 681 aaKnown RBP19.07■□□□□ 0.64
LIME1-209ENST00000494776 FKTNO75072 461 aa19.07■□□□□ 0.64
LIME1-209ENST00000494776 PDE4AP27815 886 aa19.07■□□□□ 0.64
LIME1-209ENST00000494776 JAG1P78504 1218 aa19.07■□□□□ 0.64
LIME1-209ENST00000494776 GABPAQ06546 454 aa19.07■□□□□ 0.64
LIME1-209ENST00000494776 RAB3GAP1Q15042 981 aa19.07■□□□□ 0.64
LIME1-209ENST00000494776 SHROOM1Q2M3G4 852 aaPredicted RBP19.07■□□□□ 0.64
LIME1-209ENST00000494776 NOM1Q5C9Z4 860 aaKnown RBP19.07■□□□□ 0.64
LIME1-209ENST00000494776 TICAM2Q86XR7 235 aa19.07■□□□□ 0.64
LIME1-209ENST00000494776 HELLSQ9NRZ9 838 aa19.07■□□□□ 0.64
LIME1-209ENST00000494776 DDX60LQ5H9U9 1706 aaKnown RBP19.06■□□□□ 0.64
LIME1-209ENST00000494776 CCDC129Q6ZRS4 1044 aa19.06■□□□□ 0.64
LIME1-209ENST00000494776 SLC44A5Q8NCS7 719 aa19.06■□□□□ 0.64
LIME1-209ENST00000494776 WDR18Q9BV38 432 aa19.06■□□□□ 0.64
LIME1-209ENST00000494776 TAOK2Q9UL54 1235 aa19.06■□□□□ 0.64
LIME1-209ENST00000494776 ATAD5Q96QE3 1844 aa19.06■□□□□ 0.64
LIME1-209ENST00000494776 CASP8AP2Q9UKL3 1982 aa19.05■□□□□ 0.64
LIME1-209ENST00000494776 CDK8P49336 464 aa19.05■□□□□ 0.64
LIME1-209ENST00000494776 HMGCS2P54868 508 aa19.05■□□□□ 0.64
LIME1-209ENST00000494776 MOGSQ13724 837 aa19.05■□□□□ 0.64
LIME1-209ENST00000494776 MCMDC2Q4G0Z9 681 aa19.05■□□□□ 0.64
LIME1-209ENST00000494776 SBK1Q52WX2 424 aa19.05■□□□□ 0.64
LIME1-209ENST00000494776 IFNL3Q8IZI9 196 aa19.05■□□□□ 0.64
LIME1-209ENST00000494776 STK11IPQ8N1F8 1099 aa19.05■□□□□ 0.64
LIME1-209ENST00000494776 FAM227BQ96M60 508 aa19.05■□□□□ 0.64
LIME1-209ENST00000494776 NAPBQ9H115 298 aa19.05■□□□□ 0.64
LIME1-209ENST00000494776 TMOD4Q9NZQ9 345 aa19.05■□□□□ 0.64
LIME1-209ENST00000494776 BAZ2AQ9UIF9 1905 aaKnown RBP19.04■□□□□ 0.64
LIME1-209ENST00000494776 USP17L10C9JJH3 530 aa19.04■□□□□ 0.64
LIME1-209ENST00000494776 SDSP20132 328 aa19.04■□□□□ 0.64
LIME1-209ENST00000494776 NMIQ13287 307 aaPredicted RBP19.04■□□□□ 0.64
LIME1-209ENST00000494776 DGKZQ13574 1117 aa19.04■□□□□ 0.64
LIME1-209ENST00000494776 MTMR2Q13614 643 aa19.04■□□□□ 0.64
LIME1-209ENST00000494776 GPAT2Q6NUI2 795 aa19.04■□□□□ 0.64
LIME1-209ENST00000494776 C16orf86Q6ZW13 317 aa19.04■□□□□ 0.64
LIME1-209ENST00000494776 CENPQQ7L2Z9 268 aaPredicted RBP19.04■□□□□ 0.64
LIME1-209ENST00000494776 PROCA1Q8NCQ7 364 aaPredicted RBP19.04■□□□□ 0.64
LIME1-209ENST00000494776 ABHD8Q96I13 439 aa19.04■□□□□ 0.64
LIME1-209ENST00000494776 PARK7Q99497 189 aaKnown RBP19.04■□□□□ 0.64
LIME1-209ENST00000494776 FEZ1Q99689 392 aa19.04■□□□□ 0.64
LIME1-209ENST00000494776 DIAPH3Q9NSV4 1193 aa19.04■□□□□ 0.64
LIME1-209ENST00000494776 A0A0D9SFI3 127 aa19.03■□□□□ 0.64
LIME1-209ENST00000494776 C19orf81C9J6K1 198 aa19.03■□□□□ 0.64
LIME1-209ENST00000494776 HIP1O00291 1037 aa19.03■□□□□ 0.64
LIME1-209ENST00000494776 TLR2O60603 784 aa19.03■□□□□ 0.64
LIME1-209ENST00000494776 BACE1P56817 501 aa19.03■□□□□ 0.64
LIME1-209ENST00000494776 SP3Q02447 781 aa19.03■□□□□ 0.64
LIME1-209ENST00000494776 TTC22Q5TAA0 569 aa19.03■□□□□ 0.64
LIME1-209ENST00000494776 CCDC136Q96JN2 1154 aa19.03■□□□□ 0.64
LIME1-209ENST00000494776 CCDC17Q96LX7 622 aa19.03■□□□□ 0.64
LIME1-209ENST00000494776 MKNK2Q9HBH9 465 aa19.03■□□□□ 0.64
LIME1-209ENST00000494776 EPB41L4AQ9HCS5 686 aaPredicted RBP19.03■□□□□ 0.64
LIME1-209ENST00000494776 AGTPBP1Q9UPW5 1226 aa19.03■□□□□ 0.64
LIME1-209ENST00000494776 PHIPQ8WWQ0 1821 aa19.02■□□□□ 0.64
LIME1-209ENST00000494776 SMIM22K7EJ46 135 aa19.02■□□□□ 0.64
LIME1-209ENST00000494776 MFAP1P55081 439 aaKnown RBP19.02■□□□□ 0.64
LIME1-209ENST00000494776 PABPC4Q13310 644 aaKnown RBP eCLIP19.02■□□□□ 0.64
LIME1-209ENST00000494776 SEPT2Q15019 361 aa19.02■□□□□ 0.64
LIME1-209ENST00000494776 CTU1Q7Z7A3 348 aaKnown RBP19.02■□□□□ 0.64
LIME1-209ENST00000494776 ERO1AQ96HE7 468 aa19.02■□□□□ 0.64
LIME1-209ENST00000494776 ZNF287Q9HBT7 754 aa19.02■□□□□ 0.64
LIME1-209ENST00000494776 SLC45A1Q9Y2W3 748 aa19.02■□□□□ 0.64
LIME1-209ENST00000494776 SLC3A2P08195 630 aaKnown RBP19.01■□□□□ 0.63
LIME1-209ENST00000494776 CYP2C8P10632 490 aa19.01■□□□□ 0.63
LIME1-209ENST00000494776 ZYXQ15942 572 aaKnown RBP19.01■□□□□ 0.63
LIME1-209ENST00000494776 SH3D19Q5HYK7 790 aa19.01■□□□□ 0.63
LIME1-209ENST00000494776 TREML2Q5T2D2 321 aa19.01■□□□□ 0.63
LIME1-209ENST00000494776 TMEM179Q6ZVK1 233 aa19.01■□□□□ 0.63
LIME1-209ENST00000494776 SMCR8Q8TEV9 937 aaPredicted RBP19.01■□□□□ 0.63
LIME1-209ENST00000494776 CPA4Q9UI42 421 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms