RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 PDE4BQ07343 736 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 PPP2R5BQ15173 497 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 SLC4A8Q2Y0W8 1093 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 STYK1Q6J9G0 422 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 DPP8Q6V1X1 898 aaPredicted RBP12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 C2CD5Q86YS7 1000 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 MAPKAPK5Q8IW41 473 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 NUP133Q8WUM0 1156 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 NUP62CLQ9H1M0 184 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 CLSTN2Q9H4D0 955 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 DDX19AQ9NUU7 478 aaKnown RBP12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 DAGLAQ9Y4D2 1042 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 FLT1P17948 1338 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 SIPA1L1O43166 1804 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 KIF13BQ9NQT8 1826 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 GOLGA6L4A6NEF3 574 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 PLEKHA8P1O95397 391 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 DEXIO95424 95 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 NT5C2P49902 561 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 PLCD1P51178 756 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 RNF214Q8ND24 703 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 ENGASEQ8NFI3 743 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 BICD2Q8TD16 824 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 PDLIM2Q96JY6 352 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 NOL10Q9BSC4 688 aaKnown RBP12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 RNF26Q9BY78 433 aaPredicted RBP12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 IL17RBQ9NRM6 502 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 SUGT1Q9Y2Z0 365 aa12.33□□□□□ -0.44
PRPF4B-209ENST00000494674 GREB1LQ9C091 1923 aaPredicted RBP12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 MMP1P03956 469 aa12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 CCDC173Q0VFZ6 552 aa12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 SNW1Q13573 536 aaKnown RBP12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 PKN1Q16512 942 aa12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 ANO1Q5XXA6 986 aa12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 TMTC3Q6ZXV5 915 aa12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 CATIPQ7Z7H3 387 aa12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 TEX11Q8IYF3 940 aa12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 SLC44A5Q8NCS7 719 aa12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 WASF1Q92558 559 aa12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 ANKS1AQ92625 1134 aa12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 ZC3H12CQ9C0D7 883 aaKnown RBP12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 SAP30BPQ9UHR5 308 aaKnown RBP12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 PCDHA7Q9UN72 937 aa12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 CNTNAP5Q8WYK1 1306 aa12.32□□□□□ -0.44
PRPF4B-209ENST00000494674 CALM1P0DP23 149 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 CALM2P0DP24 149 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 CALM3P0DP25 149 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 PLCG2P16885 1265 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 RASA1P20936 1047 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 PTPAQ15257 358 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 MAP3K11Q16584 847 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 DOK7Q18PE1 504 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 C10orf71Q711Q0 1435 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 CCAR1Q8IX12 1150 aaKnown RBP12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 SLF2Q8IX21 1173 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 ZNF622Q969S3 477 aaKnown RBP eCLIP12.31□□□□□ -0.443e-7■■□□□ 11.4
PRPF4B-209ENST00000494674 MAP3K14Q99558 947 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 MXD3Q9BW11 206 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 RBM28Q9NW13 759 aaKnown RBP12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 STK32BQ9NY57 414 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 GOLGB1Q14789 3259 aaKnown RBP12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 A0A1W2PQ27 194 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 A0A1W2PQ64 194 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 A0A1W2PQD8 194 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 TSPY2A6NKD2 308 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 H0YIN7 160 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 PRPF3O43395 683 aaKnown RBP12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 CHRNA5P30532 468 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 ME1P48163 572 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 TFAP4Q01664 338 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 CAMK4Q16566 473 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 AXDND1Q5T1B0 1012 aaPredicted RBP12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 ADALQ6DHV7 355 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 C16orf86Q6ZW13 317 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 KCNG4Q8TDN1 519 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 C7orf43Q8WVR3 580 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 PDGFDQ9GZP0 370 aaPredicted RBP12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 KCNJ14Q9UNX9 436 aa12.31□□□□□ -0.44
PRPF4B-209ENST00000494674 SPTLC2O15270 562 aa12.3□□□□□ -0.44
PRPF4B-209ENST00000494674 FAM160A1Q05DH4 1040 aa12.3□□□□□ -0.44
PRPF4B-209ENST00000494674 TRIM29Q14134 588 aa12.3□□□□□ -0.44
PRPF4B-209ENST00000494674 SLC39A14Q15043 492 aa12.3□□□□□ -0.44
PRPF4B-209ENST00000494674 STK38Q15208 465 aa12.3□□□□□ -0.44
PRPF4B-209ENST00000494674 DGKHQ86XP1 1220 aa12.3□□□□□ -0.44
PRPF4B-209ENST00000494674 NOSTRINQ8IVI9 506 aa12.3□□□□□ -0.44
PRPF4B-209ENST00000494674 DIS3L2Q8IYB7 885 aaKnown RBP12.3□□□□□ -0.44
PRPF4B-209ENST00000494674 TNMDQ9H2S6 317 aa12.3□□□□□ -0.44
PRPF4B-209ENST00000494674 TCP11L1Q9NUJ3 509 aa12.3□□□□□ -0.44
PRPF4B-209ENST00000494674 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
PRPF4B-209ENST00000494674 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
PRPF4B-209ENST00000494674 BTBD18B2RXH4 712 aa12.29□□□□□ -0.44
PRPF4B-209ENST00000494674 TOB1P50616 345 aaPredicted RBP12.29□□□□□ -0.44
PRPF4B-209ENST00000494674 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
PRPF4B-209ENST00000494674 FMR1NBQ8N0W7 255 aaPredicted RBP12.29□□□□□ -0.44
PRPF4B-209ENST00000494674 SRBD1Q8N5C6 995 aaKnown RBP12.29□□□□□ -0.44
PRPF4B-209ENST00000494674 FSIP1Q8NA03 581 aa12.29□□□□□ -0.44
PRPF4B-209ENST00000494674 EYA3Q99504 573 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms