RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 LRRN4CLQ8ND94 238 aa7.87□□□□□ -1.15
CCDC66-222ENST00000494672 NOC4LQ9BVI4 516 aaKnown RBP7.87□□□□□ -1.15
CCDC66-222ENST00000494672 CYP7A1P22680 504 aa7.86□□□□□ -1.15
CCDC66-222ENST00000494672 ST13P50502 369 aaKnown RBP7.86□□□□□ -1.15
CCDC66-222ENST00000494672 PDE4BQ07343 736 aa7.86□□□□□ -1.15
CCDC66-222ENST00000494672 PRAMEF13Q5VWM6 474 aa7.86□□□□□ -1.15
CCDC66-222ENST00000494672 DNAJC14Q6Y2X3 702 aaPredicted RBP7.86□□□□□ -1.15
CCDC66-222ENST00000494672 C22orf34Q6ZV56 151 aa7.86□□□□□ -1.15
CCDC66-222ENST00000494672 TMC4Q7Z404 712 aa7.86□□□□□ -1.15
CCDC66-222ENST00000494672 POU5F2Q8N7G0 328 aa7.86□□□□□ -1.15
CCDC66-222ENST00000494672 LMCD1Q9NZU5 365 aa7.86□□□□□ -1.15
CCDC66-222ENST00000494672 USP31Q70CQ4 1352 aa7.85□□□□□ -1.15
CCDC66-222ENST00000494672 PITPNM2Q9BZ72 1349 aa7.85□□□□□ -1.15
CCDC66-222ENST00000494672 TFE3P19532 575 aaPredicted RBP7.85□□□□□ -1.15
CCDC66-222ENST00000494672 MFSD4AQ8N468 514 aa7.85□□□□□ -1.15
CCDC66-222ENST00000494672 RIN3Q8TB24 985 aa7.85□□□□□ -1.15
CCDC66-222ENST00000494672 JARID2Q92833 1246 aaPredicted RBP7.85□□□□□ -1.15
CCDC66-222ENST00000494672 COX4I2Q96KJ9 171 aa7.85□□□□□ -1.15
CCDC66-222ENST00000494672 PGRP06401 933 aa7.84□□□□□ -1.15
CCDC66-222ENST00000494672 ZNF865P0CJ78 1059 aaPredicted RBP7.84□□□□□ -1.15
CCDC66-222ENST00000494672 ITGAEP38570 1179 aa7.84□□□□□ -1.15
CCDC66-222ENST00000494672 RPL6Q02878 288 aaKnown RBP7.84□□□□□ -1.15
CCDC66-222ENST00000494672 CDKAL1Q5VV42 579 aa7.84□□□□□ -1.15
CCDC66-222ENST00000494672 SLC6A19Q695T7 634 aa7.84□□□□□ -1.15
CCDC66-222ENST00000494672 XAGE3Q8WTP9 111 aa7.84□□□□□ -1.15
CCDC66-222ENST00000494672 FAM168AQ92567 244 aa7.84□□□□□ -1.15
CCDC66-222ENST00000494672 HSPA12BQ96MM6 686 aa7.84□□□□□ -1.15
CCDC66-222ENST00000494672 ARID1BQ8NFD5 2236 aaPredicted RBP7.83□□□□□ -1.16
CCDC66-222ENST00000494672 CNTNAP4Q9C0A0 1308 aa7.83□□□□□ -1.16
CCDC66-222ENST00000494672 BTBD11A6QL63 1104 aa7.83□□□□□ -1.16
CCDC66-222ENST00000494672 PRR33A8MZF0 331 aa7.83□□□□□ -1.16
CCDC66-222ENST00000494672 CBX7O95931 251 aa7.83□□□□□ -1.16
CCDC66-222ENST00000494672 ERCC3P19447 782 aa7.83□□□□□ -1.16
CCDC66-222ENST00000494672 CCDC84Q86UT8 332 aaPredicted RBP7.83□□□□□ -1.16
CCDC66-222ENST00000494672 MRPL41Q8IXM3 137 aaKnown RBP7.83□□□□□ -1.16
CCDC66-222ENST00000494672 PHC3Q8NDX5 983 aa7.83□□□□□ -1.16
CCDC66-222ENST00000494672 TMEM40Q8WWA1 233 aa7.83□□□□□ -1.16
CCDC66-222ENST00000494672 TMEM87BQ96K49 555 aa7.83□□□□□ -1.16
CCDC66-222ENST00000494672 PRDM7Q9NQW5 492 aa7.83□□□□□ -1.16
CCDC66-222ENST00000494672 SEMA3GQ9NS98 782 aa7.83□□□□□ -1.16
CCDC66-222ENST00000494672 TJP2Q9UDY2 1190 aa7.83□□□□□ -1.16
CCDC66-222ENST00000494672 TLR6Q9Y2C9 796 aa7.83□□□□□ -1.16
CCDC66-222ENST00000494672 CARMIL2Q6F5E8 1435 aa7.83□□□□□ -1.16
CCDC66-222ENST00000494672 SORBS3O60504 671 aa7.82□□□□□ -1.16
CCDC66-222ENST00000494672 CTSHP09668 335 aa7.82□□□□□ -1.16
CCDC66-222ENST00000494672 CDH24Q86UP0 819 aa7.82□□□□□ -1.16
CCDC66-222ENST00000494672 FLAD1Q8NFF5 587 aa7.82□□□□□ -1.16
CCDC66-222ENST00000494672 FAM161BQ96MY7 647 aa7.82□□□□□ -1.16
CCDC66-222ENST00000494672 MRS2Q9HD23 443 aa7.82□□□□□ -1.16
CCDC66-222ENST00000494672 ADAM30Q9UKF2 790 aa7.82□□□□□ -1.16
CCDC66-222ENST00000494672 CAPN6Q9Y6Q1 641 aa7.82□□□□□ -1.16
CCDC66-222ENST00000494672 ETV3P41162 512 aa7.81□□□□□ -1.16
CCDC66-222ENST00000494672 KIR3DL1P43629 444 aa7.81□□□□□ -1.16
CCDC66-222ENST00000494672 FBXO33Q7Z6M2 555 aa7.81□□□□□ -1.16
CCDC66-222ENST00000494672 MCATQ8IVS2 390 aaKnown RBP7.81□□□□□ -1.16
CCDC66-222ENST00000494672 ATP13A1Q9HD20 1204 aa7.81□□□□□ -1.16
CCDC66-222ENST00000494672 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.81□□□□□ -1.16
CCDC66-222ENST00000494672 BPNT1O95861 308 aa7.8□□□□□ -1.16
CCDC66-222ENST00000494672 THAP5Q7Z6K1 395 aa7.8□□□□□ -1.16
CCDC66-222ENST00000494672 RELL1Q8IUW5 271 aa7.8□□□□□ -1.16
CCDC66-222ENST00000494672 CRELD1Q96HD1 420 aa7.8□□□□□ -1.16
CCDC66-222ENST00000494672 CARS2Q9HA77 564 aaKnown RBP7.8□□□□□ -1.16
CCDC66-222ENST00000494672 ST14Q9Y5Y6 855 aa7.8□□□□□ -1.16
CCDC66-222ENST00000494672 H3BS24 57 aa7.79□□□□□ -1.16
CCDC66-222ENST00000494672 AFMP43652 599 aa7.79□□□□□ -1.16
CCDC66-222ENST00000494672 LMNB2Q03252 620 aa7.79□□□□□ -1.16
CCDC66-222ENST00000494672 PWP1Q13610 501 aa7.79□□□□□ -1.16
CCDC66-222ENST00000494672 CCDC27Q2M243 656 aa7.79□□□□□ -1.16
CCDC66-222ENST00000494672 PIWIL2Q8TC59 973 aaKnown RBP7.79□□□□□ -1.16
CCDC66-222ENST00000494672 UBE2FQ969M7 185 aa7.79□□□□□ -1.16
CCDC66-222ENST00000494672 DPH2Q9BQC3 489 aaPredicted RBP7.79□□□□□ -1.16
CCDC66-222ENST00000494672 RSRP1Q9BUV0 290 aa7.79□□□□□ -1.16
CCDC66-222ENST00000494672 GZF1Q9H116 711 aaPredicted RBP7.79□□□□□ -1.16
CCDC66-222ENST00000494672 ZSWIM5Q9P217 1185 aa7.79□□□□□ -1.16
CCDC66-222ENST00000494672 VTI1BQ9UEU0 232 aa7.79□□□□□ -1.16
CCDC66-222ENST00000494672 FARP2O94887 1054 aaPredicted RBP7.78□□□□□ -1.16
CCDC66-222ENST00000494672 C8AP07357 584 aa7.78□□□□□ -1.16
CCDC66-222ENST00000494672 PLCG1P19174 1290 aa7.78□□□□□ -1.16
CCDC66-222ENST00000494672 CAMK2GQ13555 558 aaPredicted RBP7.78□□□□□ -1.16
CCDC66-222ENST00000494672 ZSWIM9Q86XI8 627 aa7.78□□□□□ -1.16
CCDC66-222ENST00000494672 ACSF2Q96CM8 615 aaPredicted RBP7.78□□□□□ -1.16
CCDC66-222ENST00000494672 CCDC120Q96HB5 630 aa7.78□□□□□ -1.16
CCDC66-222ENST00000494672 FAM53CQ9NYF3 392 aa7.78□□□□□ -1.16
CCDC66-222ENST00000494672 CEP131Q9UPN4 1083 aa7.78□□□□□ -1.16
CCDC66-222ENST00000494672 CTNND2Q9UQB3 1225 aa7.78□□□□□ -1.16
CCDC66-222ENST00000494672 PF4P02776 101 aa7.77□□□□□ -1.17
CCDC66-222ENST00000494672 GBP2P32456 591 aaPredicted RBP7.77□□□□□ -1.17
CCDC66-222ENST00000494672 YARSP54577 528 aaKnown RBP7.77□□□□□ -1.17
CCDC66-222ENST00000494672 TNK2Q07912 1038 aa7.77□□□□□ -1.17
CCDC66-222ENST00000494672 KCNMB1Q16558 191 aa7.77□□□□□ -1.17
CCDC66-222ENST00000494672 GATAD2BQ8WXI9 593 aa7.77□□□□□ -1.17
CCDC66-222ENST00000494672 TMEM74Q96NL1 305 aa7.77□□□□□ -1.17
CCDC66-222ENST00000494672 CILPO75339 1184 aa7.76□□□□□ -1.17
CCDC66-222ENST00000494672 FZD5Q13467 585 aa7.76□□□□□ -1.17
CCDC66-222ENST00000494672 ZNF648Q5T619 568 aaPredicted RBP7.76□□□□□ -1.17
CCDC66-222ENST00000494672 BNC2Q6ZN30 1099 aaPredicted RBP7.76□□□□□ -1.17
CCDC66-222ENST00000494672 CORINQ9Y5Q5 1042 aa7.76□□□□□ -1.17
CCDC66-222ENST00000494672 FAM221AA4D161 298 aa7.75□□□□□ -1.17
CCDC66-222ENST00000494672 F13A1P00488 732 aa7.75□□□□□ -1.17
CCDC66-222ENST00000494672 GDNFP39905 211 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms