RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 AGTPBP1Q9UPW5 1226 aa11.66□□□□□ -0.54
MSH5-218ENST00000494646 MYPNQ86TC9 1320 aa11.65□□□□□ -0.54
MSH5-218ENST00000494646 MAGEB6P1A0A0J9YX57 407 aa11.65□□□□□ -0.54
MSH5-218ENST00000494646 IGSF3O75054 1194 aa11.65□□□□□ -0.54
MSH5-218ENST00000494646 PRMT2P55345 433 aa11.65□□□□□ -0.54
MSH5-218ENST00000494646 TTF1Q15361 905 aaPredicted RBP11.65□□□□□ -0.54
MSH5-218ENST00000494646 MTFR1Q15390 333 aa11.65□□□□□ -0.54
MSH5-218ENST00000494646 METTL16Q86W50 562 aaKnown RBP11.65□□□□□ -0.54
MSH5-218ENST00000494646 ANKRD13CQ8N6S4 541 aa11.65□□□□□ -0.54
MSH5-218ENST00000494646 PROCA1Q8NCQ7 364 aaPredicted RBP11.65□□□□□ -0.54
MSH5-218ENST00000494646 BIN2Q9UBW5 565 aaPredicted RBP11.65□□□□□ -0.54
MSH5-218ENST00000494646 SLC45A1Q9Y2W3 748 aa11.65□□□□□ -0.54
MSH5-218ENST00000494646 ZNF532Q9HCE3 1301 aa11.64□□□□□ -0.55
MSH5-218ENST00000494646 POLR3DP05423 398 aaPredicted RBP11.64□□□□□ -0.55
MSH5-218ENST00000494646 ASNSP08243 561 aa11.64□□□□□ -0.55
MSH5-218ENST00000494646 PDE6AP16499 860 aa11.64□□□□□ -0.55
MSH5-218ENST00000494646 PLCD1P51178 756 aa11.64□□□□□ -0.55
MSH5-218ENST00000494646 FCGRTP55899 365 aa11.64□□□□□ -0.55
MSH5-218ENST00000494646 BACE1P56817 501 aa11.64□□□□□ -0.55
MSH5-218ENST00000494646 PRKCZQ05513 592 aa11.64□□□□□ -0.55
MSH5-218ENST00000494646 MTMR2Q13614 643 aa11.64□□□□□ -0.55
MSH5-218ENST00000494646 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.64□□□□□ -0.55
MSH5-218ENST00000494646 RIOK1Q9BRS2 568 aaKnown RBP11.64□□□□□ -0.55
MSH5-218ENST00000494646 WDR18Q9BV38 432 aa11.64□□□□□ -0.55
MSH5-218ENST00000494646 PNMA3Q9UL41 463 aa11.64□□□□□ -0.55
MSH5-218ENST00000494646 BAZ2AQ9UIF9 1905 aaKnown RBP11.63□□□□□ -0.55
MSH5-218ENST00000494646 USP17L10C9JJH3 530 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 PEX10O60683 326 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 GH2P01242 217 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 CHGBP05060 677 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 GRK4P32298 578 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 EVX2Q03828 476 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 PABPC4Q13310 644 aaKnown RBP eCLIP11.63□□□□□ -0.55
MSH5-218ENST00000494646 SH3D19Q5HYK7 790 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 TTC6Q86TZ1 520 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 CERS3Q8IU89 383 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 SDR42E1Q8WUS8 393 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 P2RX7Q99572 595 aaKnown RBP11.63□□□□□ -0.55
MSH5-218ENST00000494646 TBC1D2Q9BYX2 928 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 LRRCC1Q9C099 1032 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 ASCC2Q9H1I8 757 aaPredicted RBP11.63□□□□□ -0.55
MSH5-218ENST00000494646 ARMT1Q9H993 441 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 PAG1Q9NWQ8 432 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 TMOD4Q9NZQ9 345 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 ZBTB21Q9ULJ3 1066 aa11.63□□□□□ -0.55
MSH5-218ENST00000494646 RBBP6Q7Z6E9 1792 aaKnown RBP11.63□□□□□ -0.55
MSH5-218ENST00000494646 LOC285556D6RIA3 1793 aa11.62□□□□□ -0.55
MSH5-218ENST00000494646 TCRBV5S4A2TA0A5A2 114 aa11.62□□□□□ -0.55
MSH5-218ENST00000494646 TNPO2O14787 897 aaKnown RBP11.62□□□□□ -0.55
MSH5-218ENST00000494646 PRKAB2O43741 272 aa11.62□□□□□ -0.55
MSH5-218ENST00000494646 ATP5JP18859 108 aa11.62□□□□□ -0.55
MSH5-218ENST00000494646 FLT3LGP49771 235 aa11.62□□□□□ -0.55
MSH5-218ENST00000494646 RAB3GAP1Q15042 981 aa11.62□□□□□ -0.55
MSH5-218ENST00000494646 ZYXQ15942 572 aaKnown RBP11.62□□□□□ -0.55
MSH5-218ENST00000494646 CERKLQ49MI3 558 aaPredicted RBP11.62□□□□□ -0.55
MSH5-218ENST00000494646 TATDN1Q6P1N9 297 aa11.62□□□□□ -0.55
MSH5-218ENST00000494646 LCORLQ8N3X6 602 aa11.62□□□□□ -0.55
MSH5-218ENST00000494646 EMILIN3Q9NT22 766 aa11.62□□□□□ -0.55
MSH5-218ENST00000494646 MCM9Q9NXL9 1143 aa11.62□□□□□ -0.55
MSH5-218ENST00000494646 SERPINB13Q9UIV8 391 aa11.62□□□□□ -0.55
MSH5-218ENST00000494646 MYH7P12883 1935 aa11.62□□□□□ -0.55
MSH5-218ENST00000494646 C19orf81C9J6K1 198 aa11.61□□□□□ -0.55
MSH5-218ENST00000494646 ADCY3O60266 1144 aa11.61□□□□□ -0.55
MSH5-218ENST00000494646 CYP2D6P10635 497 aa11.61□□□□□ -0.55
MSH5-218ENST00000494646 ELNP15502 786 aa11.61□□□□□ -0.55
MSH5-218ENST00000494646 ADD2P35612 726 aa11.61□□□□□ -0.55
MSH5-218ENST00000494646 YTHDC1Q96MU7 727 aaKnown RBP11.61□□□□□ -0.55
MSH5-218ENST00000494646 HAUS7Q99871 368 aa11.61□□□□□ -0.55
MSH5-218ENST00000494646 CRNKL1Q9BZJ0 848 aaKnown RBP11.61□□□□□ -0.55
MSH5-218ENST00000494646 DCTPP1Q9H773 170 aa11.61□□□□□ -0.55
MSH5-218ENST00000494646 GINM1Q9NU53 330 aa11.61□□□□□ -0.55
MSH5-218ENST00000494646 NAV1Q8NEY1 1877 aa11.61□□□□□ -0.55
MSH5-218ENST00000494646 MYH8P13535 1937 aa11.6□□□□□ -0.55
MSH5-218ENST00000494646 MPHOSPH10O00566 681 aaKnown RBP11.6□□□□□ -0.55
MSH5-218ENST00000494646 CCL5P13501 91 aa11.6□□□□□ -0.55
MSH5-218ENST00000494646 SHMT1P34896 483 aa11.6□□□□□ -0.55
MSH5-218ENST00000494646 GCLCP48506 637 aaPredicted RBP11.6□□□□□ -0.55
MSH5-218ENST00000494646 UBXN2AP68543 259 aa11.6□□□□□ -0.55
MSH5-218ENST00000494646 IRX3P78415 501 aaPredicted RBP11.6□□□□□ -0.55
MSH5-218ENST00000494646 ABCB5Q2M3G0 1257 aa11.6□□□□□ -0.55
MSH5-218ENST00000494646 PRPF38BQ5VTL8 546 aaKnown RBP11.6□□□□□ -0.55
MSH5-218ENST00000494646 TMED8Q6PL24 325 aaPredicted RBP11.6□□□□□ -0.55
MSH5-218ENST00000494646 USP17L2Q6R6M4 530 aa11.6□□□□□ -0.55
MSH5-218ENST00000494646 ACER1Q8TDN7 264 aa11.6□□□□□ -0.55
MSH5-218ENST00000494646 COA7Q96BR5 231 aa11.6□□□□□ -0.55
MSH5-218ENST00000494646 RNF208Q9H0X6 261 aa11.6□□□□□ -0.55
MSH5-218ENST00000494646 EHD4Q9H223 541 aa11.6□□□□□ -0.55
MSH5-218ENST00000494646 CABP5Q9NP86 173 aa11.6□□□□□ -0.55
MSH5-218ENST00000494646 SMIM22K7EJ46 135 aa11.59□□□□□ -0.55
MSH5-218ENST00000494646 MBD4O95243 580 aa11.59□□□□□ -0.55
MSH5-218ENST00000494646 HOXA7P31268 230 aaPredicted RBP11.59□□□□□ -0.55
MSH5-218ENST00000494646 SEPT2Q15019 361 aa11.59□□□□□ -0.55
MSH5-218ENST00000494646 FAM110CQ1W6H9 321 aa11.59□□□□□ -0.55
MSH5-218ENST00000494646 Q3C1V9 767 aa11.59□□□□□ -0.55
MSH5-218ENST00000494646 TSHZ3Q63HK5 1081 aa11.59□□□□□ -0.55
MSH5-218ENST00000494646 DYNLL2Q96FJ2 89 aa11.59□□□□□ -0.55
MSH5-218ENST00000494646 FEZ1Q99689 392 aa11.59□□□□□ -0.55
MSH5-218ENST00000494646 UNC93B1Q9H1C4 597 aa11.59□□□□□ -0.55
MSH5-218ENST00000494646 DCP1AQ9NPI6 582 aaPredicted RBP11.59□□□□□ -0.55
MSH5-218ENST00000494646 PCDHB15Q9Y5E8 787 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms