RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 CRAMP1Q96RY5 1269 aa10.41□□□□□ -0.74
RIF1-211ENST00000494333 ZNF277Q9NRM2 450 aaPredicted RBP10.41□□□□□ -0.74
RIF1-211ENST00000494333 DLEC1Q9Y238 1755 aa10.4□□□□□ -0.74
RIF1-211ENST00000494333 DDNO94850 711 aaPredicted RBP10.4□□□□□ -0.74
RIF1-211ENST00000494333 HCLS1P14317 486 aaPredicted RBP10.4□□□□□ -0.74
RIF1-211ENST00000494333 LBRQ14739 615 aaKnown RBP10.4□□□□□ -0.74
RIF1-211ENST00000494333 NAA30Q147X3 362 aaPredicted RBP10.4□□□□□ -0.74
RIF1-211ENST00000494333 CCDC27Q2M243 656 aa10.4□□□□□ -0.74
RIF1-211ENST00000494333 EFHC2Q5JST6 749 aa10.4□□□□□ -0.74
RIF1-211ENST00000494333 SV2AQ7L0J3 742 aa10.4□□□□□ -0.74
RIF1-211ENST00000494333 PHAXQ9H814 394 aaKnown RBP10.4□□□□□ -0.74
RIF1-211ENST00000494333 SLX4Q8IY92 1834 aa10.4□□□□□ -0.75
RIF1-211ENST00000494333 RNF123Q5XPI4 1314 aa10.39□□□□□ -0.75
RIF1-211ENST00000494333 SH3TC1Q8TE82 1336 aa10.39□□□□□ -0.75
RIF1-211ENST00000494333 COL11A2P13942 1736 aaPredicted RBP10.39□□□□□ -0.75
RIF1-211ENST00000494333 UBAP2LQ14157 1087 aaKnown RBP10.39□□□□□ -0.75
RIF1-211ENST00000494333 CCDC30Q5VVM6 783 aa10.39□□□□□ -0.75
RIF1-211ENST00000494333 B4GALNT3Q6L9W6 998 aa10.39□□□□□ -0.75
RIF1-211ENST00000494333 NLRP8Q86W28 1048 aa10.39□□□□□ -0.75
RIF1-211ENST00000494333 TSPYL6Q8N831 410 aa10.39□□□□□ -0.75
RIF1-211ENST00000494333 TSR2Q969E8 191 aaKnown RBP10.39□□□□□ -0.75
RIF1-211ENST00000494333 GTPBP3Q969Y2 492 aaKnown RBP10.39□□□□□ -0.75
RIF1-211ENST00000494333 ISCA1Q9BUE6 129 aa10.39□□□□□ -0.75
RIF1-211ENST00000494333 TRAIPQ9BWF2 469 aa10.39□□□□□ -0.75
RIF1-211ENST00000494333 CHMP4AQ9BY43 222 aa10.39□□□□□ -0.75
RIF1-211ENST00000494333 SAP130Q9H0E3 1048 aa10.39□□□□□ -0.75
RIF1-211ENST00000494333 TMX4Q9H1E5 349 aaPredicted RBP10.39□□□□□ -0.75
RIF1-211ENST00000494333 SEPT3Q9UH03 358 aa10.39□□□□□ -0.75
RIF1-211ENST00000494333 GPC6Q9Y625 555 aaPredicted RBP10.39□□□□□ -0.75
RIF1-211ENST00000494333 SBF1O95248 1867 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 NUP98P52948 1817 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 VSIG8P0DPA2 414 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 IARSP41252 1262 aaKnown RBP10.38□□□□□ -0.75
RIF1-211ENST00000494333 FSTL1Q12841 308 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 COX20Q5RI15 118 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 LRRC69Q6ZNQ3 347 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 FAM9BQ8IZU0 186 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 ZNF280CQ8ND82 737 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 SMC1BQ8NDV3 1235 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 FAM89AQ96GI7 184 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 MYO19Q96H55 970 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 HSH2DQ96JZ2 352 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 PSMD1Q99460 953 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 LRFN2Q9ULH4 789 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 GJA3Q9Y6H8 435 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 RIC1Q4ADV7 1423 aa10.38□□□□□ -0.75
RIF1-211ENST00000494333 BBOX1O75936 387 aa10.37□□□□□ -0.75
RIF1-211ENST00000494333 TRIM28Q13263 835 aaKnown RBP10.37□□□□□ -0.75
RIF1-211ENST00000494333 DDX46Q7L014 1031 aaKnown RBP10.37□□□□□ -0.75
RIF1-211ENST00000494333 SLC51AQ86UW1 340 aa10.37□□□□□ -0.75
RIF1-211ENST00000494333 GPR161Q8N6U8 529 aaKnown RBP10.37□□□□□ -0.75
RIF1-211ENST00000494333 JDP2Q8WYK2 163 aa10.37□□□□□ -0.75
RIF1-211ENST00000494333 SUSD3Q96L08 255 aa10.37□□□□□ -0.75
RIF1-211ENST00000494333 NEUROD4Q9HD90 331 aa10.37□□□□□ -0.75
RIF1-211ENST00000494333 KLK14Q9P0G3 267 aa10.37□□□□□ -0.75
RIF1-211ENST00000494333 ABCC4O15439 1325 aa10.36□□□□□ -0.75
RIF1-211ENST00000494333 FZD9O00144 591 aa10.36□□□□□ -0.75
RIF1-211ENST00000494333 GPR25O00155 361 aa10.36□□□□□ -0.75
RIF1-211ENST00000494333 DDX58O95786 925 aaKnown RBP10.36□□□□□ -0.75
RIF1-211ENST00000494333 DGKZQ13574 1117 aa10.36□□□□□ -0.75
RIF1-211ENST00000494333 TWISTNBQ3B726 338 aaPredicted RBP10.36□□□□□ -0.75
RIF1-211ENST00000494333 LCE2CQ5TA81 110 aa10.36□□□□□ -0.75
RIF1-211ENST00000494333 C16orf46Q6P387 395 aa10.36□□□□□ -0.75
RIF1-211ENST00000494333 SP8Q8IXZ3 490 aa10.36□□□□□ -0.75
RIF1-211ENST00000494333 IRF7Q92985 503 aa10.36□□□□□ -0.75
RIF1-211ENST00000494333 MYD88Q99836 296 aa10.36□□□□□ -0.75
RIF1-211ENST00000494333 ZCCHC2Q9C0B9 1178 aaKnown RBP10.36□□□□□ -0.75
RIF1-211ENST00000494333 ATP6V0A2Q9Y487 856 aa10.36□□□□□ -0.75
RIF1-211ENST00000494333 IL16Q14005 1332 aa10.35□□□□□ -0.75
RIF1-211ENST00000494333 TNRC6CQ9HCJ0 1690 aaKnown RBP10.35□□□□□ -0.75
RIF1-211ENST00000494333 IRS4O14654 1257 aaPredicted RBP10.35□□□□□ -0.75
RIF1-211ENST00000494333 WFS1O76024 890 aa10.35□□□□□ -0.75
RIF1-211ENST00000494333 GRAPQ13588 217 aa10.35□□□□□ -0.75
RIF1-211ENST00000494333 C11orf91Q3C1V1 193 aa10.35□□□□□ -0.75
RIF1-211ENST00000494333 WDR63Q8IWG1 891 aa10.35□□□□□ -0.75
RIF1-211ENST00000494333 GRAPLQ8TC17 118 aaPredicted RBP10.35□□□□□ -0.75
RIF1-211ENST00000494333 METTL22Q9BUU2 404 aaPredicted RBP10.35□□□□□ -0.75
RIF1-211ENST00000494333 STK31Q9BXU1 1019 aa10.35□□□□□ -0.75
RIF1-211ENST00000494333 ANKIB1Q9P2G1 1089 aa10.35□□□□□ -0.75
RIF1-211ENST00000494333 FER1L6Q2WGJ9 1857 aa10.35□□□□□ -0.75
RIF1-211ENST00000494333 ZNF541Q9H0D2 1346 aa10.34□□□□□ -0.75
RIF1-211ENST00000494333 PI4KAP2A4QPH2 592 aa10.34□□□□□ -0.75
RIF1-211ENST00000494333 IQCA1LA6NCM1 817 aa10.34□□□□□ -0.75
RIF1-211ENST00000494333 BRD1O95696 1058 aa10.34□□□□□ -0.75
RIF1-211ENST00000494333 PDIA4P13667 645 aaKnown RBP10.34□□□□□ -0.75
RIF1-211ENST00000494333 EIF6P56537 245 aaKnown RBP10.34□□□□□ -0.75
RIF1-211ENST00000494333 HTRA3P83110 453 aa10.34□□□□□ -0.75
RIF1-211ENST00000494333 SF3B3Q15393 1217 aaKnown RBP10.34□□□□□ -0.75
RIF1-211ENST00000494333 FOXR1Q6PIV2 292 aa10.34□□□□□ -0.75
RIF1-211ENST00000494333 FIGNL1Q6PIW4 674 aa10.34□□□□□ -0.75
RIF1-211ENST00000494333 TREML4Q6UXN2 200 aa10.34□□□□□ -0.75
RIF1-211ENST00000494333 KSR2Q6VAB6 950 aa10.34□□□□□ -0.75
RIF1-211ENST00000494333 DNAJC5GQ8N7S2 189 aa10.34□□□□□ -0.75
RIF1-211ENST00000494333 PI4KAP1Q8N8J0 262 aa10.34□□□□□ -0.75
RIF1-211ENST00000494333 ZBTB38Q8NAP3 1195 aaPredicted RBP10.34□□□□□ -0.75
RIF1-211ENST00000494333 CCDC191Q8NCU4 936 aa10.34□□□□□ -0.75
RIF1-211ENST00000494333 JARID2Q92833 1246 aaPredicted RBP10.34□□□□□ -0.75
RIF1-211ENST00000494333 MAP3K2Q9Y2U5 619 aa10.34□□□□□ -0.75
RIF1-211ENST00000494333 SNED1Q8TER0 1413 aa10.33□□□□□ -0.76
RIF1-211ENST00000494333 ATXN7O15265 892 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms