RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 TMEM59LQ9UK28 342 aa4.47□□□□□ -1.69
PTPN12-212ENST00000494248 DCDC2CA8MYV0 355 aa4.46□□□□□ -1.7
PTPN12-212ENST00000494248 PEX10O60683 326 aa4.46□□□□□ -1.7
PTPN12-212ENST00000494248 SEMA7AO75326 666 aa4.46□□□□□ -1.7
PTPN12-212ENST00000494248 ZNF252P-AS1Q0IIN9 211 aa4.46□□□□□ -1.7
PTPN12-212ENST00000494248 HNRNPA0Q13151 305 aaKnown RBP4.46□□□□□ -1.7
PTPN12-212ENST00000494248 ORC1Q13415 861 aa4.46□□□□□ -1.7
PTPN12-212ENST00000494248 ZBTB37Q5TC79 503 aa4.46□□□□□ -1.7
PTPN12-212ENST00000494248 MAP1SQ66K74 1059 aaPredicted RBP4.46□□□□□ -1.7
PTPN12-212ENST00000494248 C12orf40Q86WS4 652 aa4.46□□□□□ -1.7
PTPN12-212ENST00000494248 SULF2Q8IWU5 870 aa4.46□□□□□ -1.7
PTPN12-212ENST00000494248 SYT8Q8NBV8 401 aa4.46□□□□□ -1.7
PTPN12-212ENST00000494248 CCDC120Q96HB5 630 aa4.46□□□□□ -1.7
PTPN12-212ENST00000494248 ZSWIM5Q9P217 1185 aa4.46□□□□□ -1.7
PTPN12-212ENST00000494248 ARNTP27540 789 aa4.45□□□□□ -1.7
PTPN12-212ENST00000494248 ZNF385BQ569K4 471 aa4.45□□□□□ -1.7
PTPN12-212ENST00000494248 SFRP5Q5T4F7 317 aa4.45□□□□□ -1.7
PTPN12-212ENST00000494248 THAP5Q7Z6K1 395 aa4.45□□□□□ -1.7
PTPN12-212ENST00000494248 ADAM7Q9H2U9 754 aa4.45□□□□□ -1.7
PTPN12-212ENST00000494248 ZNF552Q9H707 407 aaPredicted RBP4.45□□□□□ -1.7
PTPN12-212ENST00000494248 EPB41L4AQ9HCS5 686 aaPredicted RBP4.45□□□□□ -1.7
PTPN12-212ENST00000494248 SRRDQ9UH36 339 aa4.45□□□□□ -1.7
PTPN12-212ENST00000494248 TEX51A0A1B0GUA7 166 aa4.44□□□□□ -1.7
PTPN12-212ENST00000494248 FAM13AO94988 1023 aa4.44□□□□□ -1.7
PTPN12-212ENST00000494248 PI3P19957 117 aa4.44□□□□□ -1.7
PTPN12-212ENST00000494248 TGM1P22735 817 aa4.44□□□□□ -1.7
PTPN12-212ENST00000494248 GRM2Q14416 872 aa4.44□□□□□ -1.7
PTPN12-212ENST00000494248 VMACQ2NL98 169 aa4.44□□□□□ -1.7
PTPN12-212ENST00000494248 IRF2BP1Q8IU81 584 aa4.44□□□□□ -1.7
PTPN12-212ENST00000494248 GRIN3AQ8TCU5 1115 aa4.44□□□□□ -1.7
PTPN12-212ENST00000494248 DACT3Q96B18 629 aaPredicted RBP4.44□□□□□ -1.7
PTPN12-212ENST00000494248 FBRSQ9HAH7 460 aa4.44□□□□□ -1.7
PTPN12-212ENST00000494248 TMEM39AQ9NV64 488 aa4.44□□□□□ -1.7
PTPN12-212ENST00000494248 GPN3Q9UHW5 284 aaPredicted RBP4.44□□□□□ -1.7
PTPN12-212ENST00000494248 MYRFQ9Y2G1 1151 aa4.44□□□□□ -1.7
PTPN12-212ENST00000494248 SASH1O94885 1247 aa4.43□□□□□ -1.7
PTPN12-212ENST00000494248 LRIG2O94898 1065 aa4.43□□□□□ -1.7
PTPN12-212ENST00000494248 CBX7O95931 251 aa4.43□□□□□ -1.7
PTPN12-212ENST00000494248 PRKCSHP14314 528 aaPredicted RBP4.43□□□□□ -1.7
PTPN12-212ENST00000494248 TNK2Q07912 1038 aa4.43□□□□□ -1.7
PTPN12-212ENST00000494248 TPX2Q9ULW0 747 aaKnown RBP4.43□□□□□ -1.7
PTPN12-212ENST00000494248 SLC22A31A6NKX4 558 aa4.42□□□□□ -1.7
PTPN12-212ENST00000494248 FANCGO15287 622 aa4.42□□□□□ -1.7
PTPN12-212ENST00000494248 GALK1P51570 392 aa4.42□□□□□ -1.7
PTPN12-212ENST00000494248 SLBPQ14493 270 aaKnown RBP eCLIP4.42□□□□□ -1.7
PTPN12-212ENST00000494248 NKG7Q16617 165 aa4.42□□□□□ -1.7
PTPN12-212ENST00000494248 SPATS1Q496A3 300 aa4.42□□□□□ -1.7
PTPN12-212ENST00000494248 CCDC74AQ96AQ1 378 aa4.42□□□□□ -1.7
PTPN12-212ENST00000494248 INTS4Q96HW7 963 aaKnown RBP4.42□□□□□ -1.7
PTPN12-212ENST00000494248 SORCS2Q96PQ0 1159 aa4.42□□□□□ -1.7
PTPN12-212ENST00000494248 ANO2Q9NQ90 1003 aa4.42□□□□□ -1.7
PTPN12-212ENST00000494248 ZGLP1P0C6A0 271 aa4.41□□□□□ -1.7
PTPN12-212ENST00000494248 SSFA2P28290 1259 aa4.41□□□□□ -1.7
PTPN12-212ENST00000494248 ZXDAP98168 799 aa4.41□□□□□ -1.7
PTPN12-212ENST00000494248 TMEM132EQ6IEE7 984 aa4.41□□□□□ -1.7
PTPN12-212ENST00000494248 TMEM151BQ8IW70 566 aa4.41□□□□□ -1.7
PTPN12-212ENST00000494248 SHISA4Q96DD7 197 aa4.41□□□□□ -1.7
PTPN12-212ENST00000494248 MIPEPQ99797 713 aa4.41□□□□□ -1.7
PTPN12-212ENST00000494248 SLC6A17Q9H1V8 727 aa4.41□□□□□ -1.7
PTPN12-212ENST00000494248 YBX2Q9Y2T7 364 aaKnown RBP4.41□□□□□ -1.7
PTPN12-212ENST00000494248 CPNE3O75131 537 aaKnown RBP4.4□□□□□ -1.71
PTPN12-212ENST00000494248 EFEMP2O95967 443 aa4.4□□□□□ -1.71
PTPN12-212ENST00000494248 NME2P22392 152 aa4.4□□□□□ -1.71
PTPN12-212ENST00000494248 AFF3P51826 1226 aaKnown RBP4.4□□□□□ -1.71
PTPN12-212ENST00000494248 FCGRTP55899 365 aa4.4□□□□□ -1.71
PTPN12-212ENST00000494248 FKBP4Q02790 459 aaKnown RBP eCLIP4.4□□□□□ -1.71
PTPN12-212ENST00000494248 PPP2R3AQ06190 1150 aa4.4□□□□□ -1.71
PTPN12-212ENST00000494248 RASIP1Q5U651 963 aa4.4□□□□□ -1.71
PTPN12-212ENST00000494248 CDC37L1Q7L3B6 337 aa4.4□□□□□ -1.71
PTPN12-212ENST00000494248 CREG2Q8IUH2 290 aa4.4□□□□□ -1.71
PTPN12-212ENST00000494248 SLC16A11Q8NCK7 471 aa4.4□□□□□ -1.71
PTPN12-212ENST00000494248 EPS8L3Q8TE67 593 aaKnown RBP4.4□□□□□ -1.71
PTPN12-212ENST00000494248 PBXIP1Q96AQ6 731 aa4.4□□□□□ -1.71
PTPN12-212ENST00000494248 ACSBG1Q96GR2 724 aa4.4□□□□□ -1.71
PTPN12-212ENST00000494248 EBF1Q9UH73 591 aa4.4□□□□□ -1.71
PTPN12-212ENST00000494248 MBD1Q9UIS9 605 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-212ENST00000494248 RFXAPO00287 272 aa4.39□□□□□ -1.71
PTPN12-212ENST00000494248 PRICKLE3O43900 615 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-212ENST00000494248 GADD45BO75293 160 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-212ENST00000494248 BMP6P22004 513 aa4.39□□□□□ -1.71
PTPN12-212ENST00000494248 HMGA2P52926 109 aa4.39□□□□□ -1.71
PTPN12-212ENST00000494248 EPHB3P54753 998 aa4.39□□□□□ -1.71
PTPN12-212ENST00000494248 HNRNPUQ00839 825 aaKnown RBP eCLIP4.39□□□□□ -1.71
PTPN12-212ENST00000494248 ZNF211Q13398 564 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-212ENST00000494248 GAB4Q2WGN9 574 aa4.39□□□□□ -1.71
PTPN12-212ENST00000494248 HHIPL2Q6UWX4 724 aa4.39□□□□□ -1.71
PTPN12-212ENST00000494248 DTHD1Q6ZMT9 781 aa4.39□□□□□ -1.71
PTPN12-212ENST00000494248 TMPRSS7Q7RTY8 843 aa4.39□□□□□ -1.71
PTPN12-212ENST00000494248 PDZD8Q8NEN9 1154 aa4.39□□□□□ -1.71
PTPN12-212ENST00000494248 NAF1Q96HR8 494 aaKnown RBP4.39□□□□□ -1.71
PTPN12-212ENST00000494248 TEPSINQ96N21 525 aa4.39□□□□□ -1.71
PTPN12-212ENST00000494248 DUSP15Q9H1R2 295 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-212ENST00000494248 PICK1Q9NRD5 415 aa4.39□□□□□ -1.71
PTPN12-212ENST00000494248 PLP2Q04941 152 aa4.38□□□□□ -1.71
PTPN12-212ENST00000494248 SF3B2Q13435 895 aaKnown RBP4.38□□□□□ -1.71
PTPN12-212ENST00000494248 INPP5AQ14642 412 aa4.38□□□□□ -1.71
PTPN12-212ENST00000494248 PHLDB3Q6NSJ2 640 aa4.38□□□□□ -1.71
PTPN12-212ENST00000494248 LETMD1Q6P1Q0 360 aa4.38□□□□□ -1.71
PTPN12-212ENST00000494248 PI16Q6UXB8 463 aa4.38□□□□□ -1.71
PTPN12-212ENST00000494248 SIGLEC10Q96LC7 697 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms