RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 DTX1Q86Y01 620 aa3.71□□□□□ -1.81
CDC42EP3-205ENST00000494083 GPBAR1Q8TDU6 330 aa3.71□□□□□ -1.81
CDC42EP3-205ENST00000494083 ANP32EQ9BTT0 268 aa3.71□□□□□ -1.81
CDC42EP3-205ENST00000494083 OSBPL1AQ9BXW6 950 aa3.71□□□□□ -1.81
CDC42EP3-205ENST00000494083 CBX8Q9HC52 389 aa3.71□□□□□ -1.81
CDC42EP3-205ENST00000494083 TET3O43151 1660 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 KNDC1Q76NI1 1749 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 FOSL1P15407 271 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 CDK8P49336 464 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 TAGLNQ01995 201 aaKnown RBP3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 PAOXQ6QHF9 649 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 NECAB3Q96P71 396 aaPredicted RBP3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 RAB3GAP2Q9H2M9 1393 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 CFAP74Q9C0B2 1584 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 FHOD3Q2V2M9 1422 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 CNTLNQ9NXG0 1405 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 REREQ9P2R6 1566 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 LEFTY1O75610 366 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 AP3B2Q13367 1082 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 ZNF574Q6ZN55 896 aaPredicted RBP3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 GSX1Q9H4S2 264 aaPredicted RBP3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 ARHGEF28Q8N1W1 1705 aaKnown RBP3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 WASHC2AQ641Q2 1341 aa3.71□□□□□ -1.82
CDC42EP3-205ENST00000494083 IQSEC2Q5JU85 1478 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 RGPD1P0DJD0 1748 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 ZNF252P-AS1Q0IIN9 211 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 PPM1JQ5JR12 505 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 ERICH6BQ5W0A0 696 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 ABI1Q8IZP0 508 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 FAM9AQ8IZU1 332 aaPredicted RBP3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 LEMD3Q9Y2U8 911 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 SMG6Q86US8 1419 aaKnown RBP3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 QRICH2Q9H0J4 1663 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 NRKQ7Z2Y5 1582 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 DCDC2CA8MYV0 355 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 F6X3S4 739 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 USP17L7P0C7H9 530 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 CCDC39Q9UFE4 941 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 ZC3H7BQ9UGR2 993 aaKnown RBP3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 MYH15Q9Y2K3 1946 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 UHRF1BP1LA0JNW5 1464 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 CYP26A1O43174 497 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 COL19A1Q14993 1142 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 ISL2Q96A47 359 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 ACSBG1Q96GR2 724 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 RAD54L2Q9Y4B4 1467 aa3.7□□□□□ -1.82
CDC42EP3-205ENST00000494083 KIAA0586Q9BVV6 1533 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 FRMPD1Q5SYB0 1578 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 LDHBP07195 334 aaKnown RBP3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 ID3Q02535 119 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 PDE4CQ08493 712 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 KCNA1Q09470 495 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 KIF4BQ2VIQ3 1234 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 RPS26P11Q5JNZ5 115 aaPredicted RBP3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 MEI1Q5TIA1 1274 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 NPM2Q86SE8 214 aaKnown RBP3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 C12orf40Q86WS4 652 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 WFDC3Q8IUB2 231 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 SMYD4Q8IYR2 804 aaPredicted RBP3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 LRRC37A3O60309 1634 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 WDR7Q9Y4E6 1490 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 KIF20BQ96Q89 1820 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 TOPAZ1Q8N9V7 1692 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 FAM87AP0C7U9 286 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 BMP6P22004 513 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 ZC3H12AQ5D1E8 599 aaKnown RBP3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 PLD6Q8N2A8 252 aaKnown RBP3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 TRAIPQ9BWF2 469 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 PIDD1Q9HB75 910 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 ATG3Q9NT62 314 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 ZMYM3Q14202 1370 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 GPRASP1Q5JY77 1395 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 TTC37Q6PGP7 1564 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 NUP153P49790 1475 aaKnown RBP3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 ANKRD33BA6NCL7 494 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 GRIK1P39086 918 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 INPP5AQ14642 412 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 ZSCAN29Q8IWY8 852 aaPredicted RBP3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 SIGLEC1Q9BZZ2 1709 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 DIP2AQ14689 1571 aa3.69□□□□□ -1.82
CDC42EP3-205ENST00000494083 LMTK2Q8IWU2 1503 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 SYCP2Q9BX26 1530 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 PCNX4Q63HM2 1172 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 CAMSAP2Q08AD1 1489 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 AKAP12Q02952 1782 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 RNGTTO60942 597 aaKnown RBP3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 WNT11O96014 354 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 GSTT1P30711 240 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 PPP2R3AQ06190 1150 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 MAP7Q14244 749 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 MCTP1Q6DN14 999 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 DDX54Q8TDD1 881 aaKnown RBP3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 GAL3ST3Q96A11 431 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 DUSP9Q99956 384 aaKnown RBP3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 C12orf49Q9H741 205 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 WASHC2CQ9Y4E1 1318 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 PLEKHH2Q8IVE3 1493 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 RIMBP3CA6NJZ7 1639 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms