RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 CARD10Q9BWT7 1032 aa7.35□□□□□ -1.23
CPSF7-213ENST00000494016 SAP130Q9H0E3 1048 aa7.35□□□□□ -1.23
CPSF7-213ENST00000494016 BTG4Q9NY30 223 aa7.35□□□□□ -1.23
CPSF7-213ENST00000494016 HCN2Q9UL51 889 aa7.35□□□□□ -1.23
CPSF7-213ENST00000494016 MRC1P22897 1456 aa7.35□□□□□ -1.23
CPSF7-213ENST00000494016 PARP4Q9UKK3 1724 aaKnown RBP7.35□□□□□ -1.23
CPSF7-213ENST00000494016 DCDC2BA2VCK2 349 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 ERVV-2B6SEH9 535 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 TGFBR3LH3BV60 316 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 SRGAP3O43295 1099 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 FRAT2O75474 233 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-213ENST00000494016 SNRPA1P09661 255 aaKnown RBP7.34□□□□□ -1.23
CPSF7-213ENST00000494016 MX2P20592 715 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 DDIT3P35638 169 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 SCNN1AP37088 669 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 SRSF11Q05519 484 aaKnown RBP7.34□□□□□ -1.23
CPSF7-213ENST00000494016 TYRO3Q06418 890 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 AIMP1Q12904 312 aaKnown RBP7.34□□□□□ -1.23
CPSF7-213ENST00000494016 LAMC2Q13753 1193 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 NAA30Q147X3 362 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-213ENST00000494016 TOM1L2Q6ZVM7 507 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 COPS6Q7L5N1 327 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 BTLAQ7Z6A9 289 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 XAGE3Q8WTP9 111 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 FMNL2Q96PY5 1086 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 PRDM11Q9NQV5 511 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 SEPT3Q9UH03 358 aa7.34□□□□□ -1.23
CPSF7-213ENST00000494016 DMGDHQ9UI17 866 aaKnown RBP7.34□□□□□ -1.23
CPSF7-213ENST00000494016 COL5A2P05997 1499 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-213ENST00000494016 SPATA31A5Q5VU36 1347 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 SPATA31A7Q8IWB4 1347 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 SHANK3Q9BYB0 1731 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 GRM8O00222 908 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 DDX58O95786 925 aaKnown RBP7.33□□□□□ -1.24
CPSF7-213ENST00000494016 SLURP2P0DP57 97 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 MYL6BP14649 208 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 MX1P20591 662 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 CTBSQ01459 385 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 FAM182BQ5T319 152 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 TSHZ3Q63HK5 1081 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 GPAT2Q6NUI2 795 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 SUCLG2Q96I99 432 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 CEP63Q96MT8 703 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 METTL22Q9BUU2 404 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-213ENST00000494016 SLKQ9H2G2 1235 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-213ENST00000494016 IL1RAPL2Q9NP60 686 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 C9orf78Q9NZ63 289 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-213ENST00000494016 LRP5O75197 1615 aa7.33□□□□□ -1.24
CPSF7-213ENST00000494016 AOX1Q06278 1338 aa7.32□□□□□ -1.24
CPSF7-213ENST00000494016 RREB1Q92766 1687 aa7.32□□□□□ -1.24
CPSF7-213ENST00000494016 NEURL1BA8MQ27 555 aa7.32□□□□□ -1.24
CPSF7-213ENST00000494016 TNFRSF10BO14763 440 aa7.32□□□□□ -1.24
CPSF7-213ENST00000494016 IL2RBP14784 551 aa7.32□□□□□ -1.24
CPSF7-213ENST00000494016 CHMLP26374 656 aa7.32□□□□□ -1.24
CPSF7-213ENST00000494016 KCNQ4P56696 695 aa7.32□□□□□ -1.24
CPSF7-213ENST00000494016 EVA1CP58658 441 aa7.32□□□□□ -1.24
CPSF7-213ENST00000494016 GCKRQ14397 625 aa7.32□□□□□ -1.24
CPSF7-213ENST00000494016 TTC5Q8N0Z6 440 aa7.32□□□□□ -1.24
CPSF7-213ENST00000494016 KIF1BPQ96EK5 621 aa7.32□□□□□ -1.24
CPSF7-213ENST00000494016 IFT43Q96FT9 208 aa7.32□□□□□ -1.24
CPSF7-213ENST00000494016 STRN4Q9NRL3 753 aa7.32□□□□□ -1.24
CPSF7-213ENST00000494016 NSFL1CQ9UNZ2 370 aaKnown RBP7.32□□□□□ -1.24
CPSF7-213ENST00000494016 SPATA31A1Q5TZJ5 1347 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 USP42Q9H9J4 1324 aaKnown RBP7.31□□□□□ -1.24
CPSF7-213ENST00000494016 C2CD2LO14523 706 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 ERC2O15083 957 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 SASH1O94885 1247 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 IGHA1P01876 353 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 CD33P20138 364 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 BRD2P25440 801 aaKnown RBP7.31□□□□□ -1.24
CPSF7-213ENST00000494016 BAG6P46379 1132 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 MAP2K3P46734 347 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 PIP4K2AP48426 406 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-213ENST00000494016 SFSWAPQ12872 951 aaKnown RBP7.31□□□□□ -1.24
CPSF7-213ENST00000494016 R3HDM1Q15032 1099 aaKnown RBP7.31□□□□□ -1.24
CPSF7-213ENST00000494016 HSP90AB4PQ58FF6 505 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 EPHA10Q5JZY3 1008 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 NUP188Q5SRE5 1749 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 KRT27Q7Z3Y8 459 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 HSCBQ8IWL3 235 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 PI4K2BQ8TCG2 481 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 MYD88Q99836 296 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 BICC1Q9H694 974 aaKnown RBP7.31□□□□□ -1.24
CPSF7-213ENST00000494016 BRD7Q9NPI1 651 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 CHMP5Q9NZZ3 219 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 MARK1Q9P0L2 795 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 PA2G4Q9UQ80 394 aaKnown RBP7.31□□□□□ -1.24
CPSF7-213ENST00000494016 HDAC5Q9UQL6 1122 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-213ENST00000494016 UBR2Q8IWV8 1755 aa7.31□□□□□ -1.24
CPSF7-213ENST00000494016 PCDH11XQ9BZA7 1347 aa7.3□□□□□ -1.24
CPSF7-213ENST00000494016 PCDH11YQ9BZA8 1340 aa7.3□□□□□ -1.24
CPSF7-213ENST00000494016 MICAL2O94851 1124 aa7.3□□□□□ -1.24
CPSF7-213ENST00000494016 INPP5BP32019 993 aa7.3□□□□□ -1.24
CPSF7-213ENST00000494016 IDH3AP50213 366 aa7.3□□□□□ -1.24
CPSF7-213ENST00000494016 CASP7P55210 303 aa7.3□□□□□ -1.24
CPSF7-213ENST00000494016 RABEP1Q15276 862 aa7.3□□□□□ -1.24
CPSF7-213ENST00000494016 CASC1Q6TDU7 716 aa7.3□□□□□ -1.24
CPSF7-213ENST00000494016 PLBD2Q8NHP8 589 aa7.3□□□□□ -1.24
CPSF7-213ENST00000494016 DDX54Q8TDD1 881 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms