RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 HMOX1P09601 288 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 FERP16591 822 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 PPFIA1Q13136 1202 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 STIM1Q13586 685 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 RASA3Q14644 834 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 STX1AQ16623 288 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 CYB5D1Q6P9G0 228 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 C16orf71Q8IYS4 520 aaPredicted RBP7.73□□□□□ -1.17
VPS13B-205ENST00000493587 HDAC6Q9UBN7 1215 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 L1RE1Q9UN81 338 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 DYTNA2CJ06 578 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 PFDN1O60925 122 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 USP5P45974 858 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 ACCSLQ4AC99 568 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 Q4G0T1 1027 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 SPTY2D1Q68D10 685 aaPredicted RBP7.73□□□□□ -1.17
VPS13B-205ENST00000493587 ZNF280DQ6N043 979 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 BZW1Q7L1Q6 419 aaKnown RBP7.73□□□□□ -1.17
VPS13B-205ENST00000493587 TRIML1Q8N9V2 468 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 TRIM11Q96F44 468 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 RBM17Q96I25 401 aaKnown RBP7.73□□□□□ -1.17
VPS13B-205ENST00000493587 RBM41Q96IZ5 413 aaKnown RBP7.73□□□□□ -1.17
VPS13B-205ENST00000493587 ARPC5LQ9BPX5 153 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 TRAIPQ9BWF2 469 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 DNAAF2Q9NVR5 837 aaKnown RBP7.73□□□□□ -1.17
VPS13B-205ENST00000493587 KIAA1551Q9HCM1 1747 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 KDM6AO15550 1401 aaPredicted RBP7.72□□□□□ -1.17
VPS13B-205ENST00000493587 UPP2O95045 317 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 CNGA1P29973 690 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 KIF5BP33176 963 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 KBTBD12Q3ZCT8 623 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 OLFML1Q6UWY5 402 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 SEPT14Q6ZU15 432 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 C11orf57Q6ZUT1 292 aaPredicted RBP7.72□□□□□ -1.17
VPS13B-205ENST00000493587 PNMA8AQ86V59 439 aaPredicted RBP7.72□□□□□ -1.17
VPS13B-205ENST00000493587 RILPL2Q969X0 211 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 TRIM7Q9C029 511 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 HAUS2Q9NVX0 235 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 ANKIB1Q9P2G1 1089 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 SWAP70Q9UH65 585 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 LTBP4Q8N2S1 1624 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 SMAPO00193 183 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 MYO1BO43795 1136 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 OPA1O60313 960 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 PARP1P09874 1014 aaKnown RBP7.72□□□□□ -1.17
VPS13B-205ENST00000493587 CTCFP49711 727 aaPredicted RBP7.72□□□□□ -1.17
VPS13B-205ENST00000493587 VSNL1P62760 191 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 SFSWAPQ12872 951 aaKnown RBP7.72□□□□□ -1.17
VPS13B-205ENST00000493587 DCTN1Q14203 1278 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 SPECC1Q5M775 1068 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 TTC6Q86TZ1 520 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 PLEKHM2Q8IWE5 1019 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 CCDC83Q8IWF9 413 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 WDR24Q96S15 920 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 PNKPQ96T60 521 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 GORASP1Q9BQQ3 440 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 MMTAG2Q9BU76 263 aaKnown RBP7.72□□□□□ -1.17
VPS13B-205ENST00000493587 BABAM1Q9NWV8 329 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 COL14A1Q05707 1796 aaKnown RBP7.72□□□□□ -1.17
VPS13B-205ENST00000493587 LRRD1A4D1F6 860 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 CTAGE15A4D2H0 777 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 LRRIQ3A6PVS8 624 aaPredicted RBP7.72□□□□□ -1.17
VPS13B-205ENST00000493587 FESP07332 822 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 CTAGE8P0CG41 777 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 HOXC9P31274 260 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 SESN3P58005 492 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 PPARDQ03181 441 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 PDCLQ13371 301 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 CCDC92Q53HC0 331 aaPredicted RBP7.72□□□□□ -1.17
VPS13B-205ENST00000493587 TRIM68Q6AZZ1 485 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 MIS18BP1Q6P0N0 1132 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 RSRC2Q7L4I2 434 aaKnown RBP7.72□□□□□ -1.17
VPS13B-205ENST00000493587 SRGAP1Q7Z6B7 1085 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 CTAGE6Q86UF2 777 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 SPATS2Q86XZ4 545 aaKnown RBP7.72□□□□□ -1.17
VPS13B-205ENST00000493587 CTAGE4Q8IX94 777 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 CLSTN2Q9H4D0 955 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 RHBDL2Q9NX52 303 aa7.72□□□□□ -1.17
VPS13B-205ENST00000493587 ERICH2A1L162 156 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 EIF3HO15372 352 aaKnown RBP eCLIP7.71□□□□□ -1.17
VPS13B-205ENST00000493587 FNTAP49354 379 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 ATP1A2P50993 1020 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 FAM160A1Q05DH4 1040 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 PDIA5Q14554 519 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 SAPCD2Q86UD0 394 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 STAMBPL1Q96FJ0 436 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 FAM81BQ96LP2 452 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 ORAI2Q96SN7 254 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 XPO4Q9C0E2 1151 aaKnown RBP7.71□□□□□ -1.17
VPS13B-205ENST00000493587 NACA2Q9H009 215 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 VCPKMTQ9H867 229 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 ANO10Q9NW15 660 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 SPATA7Q9P0W8 599 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 IMPACTQ9P2X3 320 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 PCDHGC5Q9Y5F6 944 aa7.71□□□□□ -1.17
VPS13B-205ENST00000493587 A0A1B0GVG6 124 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 CEP104O60308 925 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 SLC4A2P04920 1241 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 GJB2P29033 226 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 TMEM62Q0P6H9 643 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms