RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 GCC1Q96CN9 775 aa16.27■□□□□ 0.2
SNED1-212ENST00000493358 PCDH10Q9P2E7 1040 aa16.27■□□□□ 0.2
SNED1-212ENST00000493358 RAB11FIP3O75154 756 aa16.26■□□□□ 0.19
SNED1-212ENST00000493358 IRX3P78415 501 aaPredicted RBP16.26■□□□□ 0.19
SNED1-212ENST00000493358 FAM110CQ1W6H9 321 aa16.26■□□□□ 0.19
SNED1-212ENST00000493358 NDUFB9Q9Y6M9 179 aa16.26■□□□□ 0.19
SNED1-212ENST00000493358 MKI67P46013 3256 aaKnown RBP16.26■□□□□ 0.19
SNED1-212ENST00000493358 GDF11O95390 407 aa16.25■□□□□ 0.19
SNED1-212ENST00000493358 MTMR2Q13614 643 aa16.25■□□□□ 0.19
SNED1-212ENST00000493358 TTC6Q86TZ1 520 aa16.25■□□□□ 0.19
SNED1-212ENST00000493358 DNAJC2Q99543 621 aaKnown RBP16.25■□□□□ 0.19
SNED1-212ENST00000493358 WDR18Q9BV38 432 aa16.25■□□□□ 0.19
SNED1-212ENST00000493358 ANTXR1Q9H6X2 564 aa16.25■□□□□ 0.19
SNED1-212ENST00000493358 ZBTB40Q9NUA8 1239 aa16.25■□□□□ 0.19
SNED1-212ENST00000493358 TAOK2Q9UL54 1235 aa16.25■□□□□ 0.19
SNED1-212ENST00000493358 ZBTB21Q9ULJ3 1066 aa16.25■□□□□ 0.19
SNED1-212ENST00000493358 MAGEB6P1A0A0J9YX57 407 aa16.24■□□□□ 0.19
SNED1-212ENST00000493358 C19orf81C9J6K1 198 aa16.24■□□□□ 0.19
SNED1-212ENST00000493358 ADCY3O60266 1144 aa16.24■□□□□ 0.19
SNED1-212ENST00000493358 BACE1P56817 501 aa16.24■□□□□ 0.19
SNED1-212ENST00000493358 SH3D19Q5HYK7 790 aa16.24■□□□□ 0.19
SNED1-212ENST00000493358 METTL16Q86W50 562 aaKnown RBP16.24■□□□□ 0.19
SNED1-212ENST00000493358 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNED1-212ENST00000493358 FEZ1Q99689 392 aa16.24■□□□□ 0.19
SNED1-212ENST00000493358 DNAJC18Q9H819 358 aa16.24■□□□□ 0.19
SNED1-212ENST00000493358 SERPINB13Q9UIV8 391 aa16.24■□□□□ 0.19
SNED1-212ENST00000493358 USP17L10C9JJH3 530 aa16.23■□□□□ 0.19
SNED1-212ENST00000493358 FLT3LGP49771 235 aa16.23■□□□□ 0.19
SNED1-212ENST00000493358 RRP1BQ14684 758 aaKnown RBP16.23■□□□□ 0.19
SNED1-212ENST00000493358 MTFR1Q15390 333 aa16.23■□□□□ 0.19
SNED1-212ENST00000493358 SLC9C2Q5TAH2 1124 aa16.23■□□□□ 0.19
SNED1-212ENST00000493358 CRNKL1Q9BZJ0 848 aaKnown RBP16.23■□□□□ 0.19
SNED1-212ENST00000493358 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
SNED1-212ENST00000493358 ASCC2Q9H1I8 757 aaPredicted RBP16.23■□□□□ 0.19
SNED1-212ENST00000493358 EHD4Q9H223 541 aa16.23■□□□□ 0.19
SNED1-212ENST00000493358 GABRQQ9UN88 632 aa16.23■□□□□ 0.19
SNED1-212ENST00000493358 PLXNB2O15031 1838 aa16.22■□□□□ 0.19
SNED1-212ENST00000493358 GOLIM4O00461 696 aa16.22■□□□□ 0.19
SNED1-212ENST00000493358 POLR3DP05423 398 aaPredicted RBP16.22■□□□□ 0.19
SNED1-212ENST00000493358 CCL5P13501 91 aa16.22■□□□□ 0.19
SNED1-212ENST00000493358 PDE3AQ14432 1141 aa16.22■□□□□ 0.19
SNED1-212ENST00000493358 CABP5Q9NP86 173 aa16.22■□□□□ 0.19
SNED1-212ENST00000493358 GH2P01242 217 aa16.21■□□□□ 0.19
SNED1-212ENST00000493358 PDE6AP16499 860 aa16.21■□□□□ 0.19
SNED1-212ENST00000493358 IRF5Q13568 498 aa16.21■□□□□ 0.19
SNED1-212ENST00000493358 CCAR1Q8IX12 1150 aaKnown RBP16.21■□□□□ 0.19
SNED1-212ENST00000493358 PXYLP1Q8TE99 480 aa16.21■□□□□ 0.19
SNED1-212ENST00000493358 GTF3C2Q8WUA4 911 aaPredicted RBP16.21■□□□□ 0.19
SNED1-212ENST00000493358 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.21■□□□□ 0.19
SNED1-212ENST00000493358 GJB1P08034 283 aa16.2■□□□□ 0.18
SNED1-212ENST00000493358 RAB3GAP1Q15042 981 aa16.2■□□□□ 0.18
SNED1-212ENST00000493358 CERKLQ49MI3 558 aaPredicted RBP16.2■□□□□ 0.18
SNED1-212ENST00000493358 USP17L2Q6R6M4 530 aa16.2■□□□□ 0.18
SNED1-212ENST00000493358 CWC22Q9HCG8 908 aaKnown RBP16.2■□□□□ 0.18
SNED1-212ENST00000493358 PAG1Q9NWQ8 432 aa16.2■□□□□ 0.18
SNED1-212ENST00000493358 ZNF532Q9HCE3 1301 aa16.19■□□□□ 0.18
SNED1-212ENST00000493358 INHAP05111 366 aa16.19■□□□□ 0.18
SNED1-212ENST00000493358 ELNP15502 786 aa16.19■□□□□ 0.18
SNED1-212ENST00000493358 HOXA7P31268 230 aaPredicted RBP16.19■□□□□ 0.18
SNED1-212ENST00000493358 GJA8P48165 433 aa16.19■□□□□ 0.18
SNED1-212ENST00000493358 USP14P54578 494 aa16.19■□□□□ 0.18
SNED1-212ENST00000493358 ABCB5Q2M3G0 1257 aa16.19■□□□□ 0.18
SNED1-212ENST00000493358 TATDN1Q6P1N9 297 aa16.19■□□□□ 0.18
SNED1-212ENST00000493358 SIRT2Q8IXJ6 389 aa16.19■□□□□ 0.18
SNED1-212ENST00000493358 AMOTL1Q8IY63 956 aa16.19■□□□□ 0.18
SNED1-212ENST00000493358 RIOK1Q9BRS2 568 aaKnown RBP16.19■□□□□ 0.18
SNED1-212ENST00000493358 LRRCC1Q9C099 1032 aa16.19■□□□□ 0.18
SNED1-212ENST00000493358 MCM9Q9NXL9 1143 aa16.19■□□□□ 0.18
SNED1-212ENST00000493358 CAPN2P17655 700 aa16.18■□□□□ 0.18
SNED1-212ENST00000493358 HERVK_113P62684 666 aa16.18■□□□□ 0.18
SNED1-212ENST00000493358 ZYXQ15942 572 aaKnown RBP16.18■□□□□ 0.18
SNED1-212ENST00000493358 GPRC5AQ8NFJ5 357 aa16.18■□□□□ 0.18
SNED1-212ENST00000493358 DDRGK1Q96HY6 314 aa16.18■□□□□ 0.18
SNED1-212ENST00000493358 HTATIP2Q9BUP3 242 aa16.18■□□□□ 0.18
SNED1-212ENST00000493358 UNC93B1Q9H1C4 597 aa16.18■□□□□ 0.18
SNED1-212ENST00000493358 BOLA2Q9H3K6 86 aa16.18■□□□□ 0.18
SNED1-212ENST00000493358 MORF4L1Q9UBU8 362 aa16.18■□□□□ 0.18
SNED1-212ENST00000493358 MPHOSPH10O00566 681 aaKnown RBP16.17■□□□□ 0.18
SNED1-212ENST00000493358 HMGCRP04035 888 aa16.17■□□□□ 0.18
SNED1-212ENST00000493358 JAG1P78504 1218 aa16.17■□□□□ 0.18
SNED1-212ENST00000493358 SHROOM1Q2M3G4 852 aaPredicted RBP16.17■□□□□ 0.18
SNED1-212ENST00000493358 ZSCAN25Q6NSZ9 544 aa16.17■□□□□ 0.18
SNED1-212ENST00000493358 U2AF1L4Q8WU68 220 aaKnown RBP16.17■□□□□ 0.18
SNED1-212ENST00000493358 SHISA4Q96DD7 197 aa16.17■□□□□ 0.18
SNED1-212ENST00000493358 GPATCH3Q96I76 525 aa16.17■□□□□ 0.18
SNED1-212ENST00000493358 FARP2O94887 1054 aaPredicted RBP16.16■□□□□ 0.18
SNED1-212ENST00000493358 ATP5JP18859 108 aa16.16■□□□□ 0.18
SNED1-212ENST00000493358 MAPK4P31152 587 aa16.16■□□□□ 0.18
SNED1-212ENST00000493358 SOCS4Q8WXH5 440 aa16.16■□□□□ 0.18
SNED1-212ENST00000493358 DPF3Q92784 378 aa16.16■□□□□ 0.18
SNED1-212ENST00000493358 P2RX7Q99572 595 aaKnown RBP16.16■□□□□ 0.18
SNED1-212ENST00000493358 PAGR1Q9BTK6 254 aa16.16■□□□□ 0.18
SNED1-212ENST00000493358 PARP14Q460N5 1801 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 FRMPD3Q5JV73 1810 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 USP17L15C9J2P7 530 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 USP17L13C9JLJ4 530 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 USP17L11C9JVI0 530 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 USP17L18D6R9N7 530 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 USP17L22D6RA61 530 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 USP17L17D6RBQ6 530 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms