RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 PTCH2Q9Y6C5 1203 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 ZNF532Q9HCE3 1301 aa16.4■□□□□ 0.22
IRF1-210ENST00000493208 BCRP11274 1271 aa16.39■□□□□ 0.21
IRF1-210ENST00000493208 MOGSQ13724 837 aa16.39■□□□□ 0.21
IRF1-210ENST00000493208 FAM110CQ1W6H9 321 aa16.39■□□□□ 0.21
IRF1-210ENST00000493208 CERKLQ49MI3 558 aaPredicted RBP16.39■□□□□ 0.21
IRF1-210ENST00000493208 SLAIN1Q8ND83 568 aa16.39■□□□□ 0.21
IRF1-210ENST00000493208 ZBTB21Q9ULJ3 1066 aa16.39■□□□□ 0.21
IRF1-210ENST00000493208 MTMR2Q13614 643 aa16.38■□□□□ 0.21
IRF1-210ENST00000493208 UBE3CQ15386 1083 aa16.38■□□□□ 0.21
IRF1-210ENST00000493208 ABCB5Q2M3G0 1257 aa16.38■□□□□ 0.21
IRF1-210ENST00000493208 USP17L2Q6R6M4 530 aa16.38■□□□□ 0.21
IRF1-210ENST00000493208 ZNF333Q96JL9 665 aa16.38■□□□□ 0.21
IRF1-210ENST00000493208 RIOK1Q9BRS2 568 aaKnown RBP16.38■□□□□ 0.21
IRF1-210ENST00000493208 DCTPP1Q9H773 170 aa16.38■□□□□ 0.21
IRF1-210ENST00000493208 SH2D4AQ9H788 454 aa16.38■□□□□ 0.21
IRF1-210ENST00000493208 CWC22Q9HCG8 908 aaKnown RBP16.38■□□□□ 0.21
IRF1-210ENST00000493208 ADGRA2Q96PE1 1338 aa16.38■□□□□ 0.21
IRF1-210ENST00000493208 ZFYP08048 801 aaPredicted RBP16.37■□□□□ 0.21
IRF1-210ENST00000493208 GRK4P32298 578 aa16.37■□□□□ 0.21
IRF1-210ENST00000493208 C20orf194Q5TEA3 1177 aa16.37■□□□□ 0.21
IRF1-210ENST00000493208 TATDN1Q6P1N9 297 aa16.37■□□□□ 0.21
IRF1-210ENST00000493208 NDUFB9Q9Y6M9 179 aa16.37■□□□□ 0.21
IRF1-210ENST00000493208 GDF11O95390 407 aa16.36■□□□□ 0.21
IRF1-210ENST00000493208 GH2P01242 217 aa16.36■□□□□ 0.21
IRF1-210ENST00000493208 HOXA7P31268 230 aaPredicted RBP16.36■□□□□ 0.21
IRF1-210ENST00000493208 ADD2P35612 726 aa16.36■□□□□ 0.21
IRF1-210ENST00000493208 RRP1P56182 461 aaKnown RBP16.36■□□□□ 0.21
IRF1-210ENST00000493208 RAB3GAP1Q15042 981 aa16.36■□□□□ 0.21
IRF1-210ENST00000493208 ANKRD13CQ8N6S4 541 aa16.36■□□□□ 0.21
IRF1-210ENST00000493208 ZNF287Q9HBT7 754 aa16.36■□□□□ 0.21
IRF1-210ENST00000493208 GLRX3O76003 335 aaKnown RBP16.35■□□□□ 0.21
IRF1-210ENST00000493208 CCNA1P78396 465 aa16.35■□□□□ 0.21
IRF1-210ENST00000493208 ARHGAP39Q9C0H5 1083 aa16.35■□□□□ 0.21
IRF1-210ENST00000493208 ASCC2Q9H1I8 757 aaPredicted RBP16.35■□□□□ 0.21
IRF1-210ENST00000493208 TTC41PQ6P2S7 1318 aa16.35■□□□□ 0.21
IRF1-210ENST00000493208 MPHOSPH10O00566 681 aaKnown RBP16.34■□□□□ 0.21
IRF1-210ENST00000493208 MBD4O95243 580 aa16.34■□□□□ 0.21
IRF1-210ENST00000493208 GNAT2P19087 354 aa16.34■□□□□ 0.21
IRF1-210ENST00000493208 TREML2Q5T2D2 321 aa16.34■□□□□ 0.21
IRF1-210ENST00000493208 GPRC5AQ8NFJ5 357 aa16.34■□□□□ 0.21
IRF1-210ENST00000493208 PXYLP1Q8TE99 480 aa16.34■□□□□ 0.21
IRF1-210ENST00000493208 CCDC17Q96LX7 622 aa16.34■□□□□ 0.21
IRF1-210ENST00000493208 DCP1AQ9NPI6 582 aaPredicted RBP16.34■□□□□ 0.21
IRF1-210ENST00000493208 USP17L15C9J2P7 530 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 USP17L13C9JLJ4 530 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 USP17L11C9JVI0 530 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 USP17L18D6R9N7 530 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 USP17L22D6RA61 530 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 USP17L17D6RBQ6 530 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 USP17L19D6RCP7 530 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 USP17L20D6RJB6 530 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 PRKCZQ05513 592 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 USP17L24Q0WX57 530 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 IRF5Q13568 498 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 PRPF38BQ5VTL8 546 aaKnown RBP16.33■□□□□ 0.2
IRF1-210ENST00000493208 TMEM179Q6ZVK1 233 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 CCDC84Q86UT8 332 aaPredicted RBP16.33■□□□□ 0.2
IRF1-210ENST00000493208 TRMT44Q8IYL2 757 aaKnown RBP16.33■□□□□ 0.2
IRF1-210ENST00000493208 SH3TC2Q8TF17 1288 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 SOCS4Q8WXH5 440 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 KIAA1683Q9H0B3 1180 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 DNAJC18Q9H819 358 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 ARHGEF10LQ9HCE6 1279 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 ARPP21Q9UBL0 812 aaPredicted RBP16.33■□□□□ 0.2
IRF1-210ENST00000493208 FOCADQ5VW36 1801 aa16.33■□□□□ 0.2
IRF1-210ENST00000493208 TCRBV5S4A2TA0A5A2 114 aa16.32■□□□□ 0.2
IRF1-210ENST00000493208 ADCY3O60266 1144 aa16.32■□□□□ 0.2
IRF1-210ENST00000493208 ECM2O94769 699 aaPredicted RBP16.32■□□□□ 0.2
IRF1-210ENST00000493208 SLURP2P0DP57 97 aa16.32■□□□□ 0.2
IRF1-210ENST00000493208 MAPK4P31152 587 aa16.32■□□□□ 0.2
IRF1-210ENST00000493208 LCORLQ8N3X6 602 aa16.32■□□□□ 0.2
IRF1-210ENST00000493208 KBTBD3Q8NAB2 608 aa16.32■□□□□ 0.2
IRF1-210ENST00000493208 YTHDC1Q96MU7 727 aaKnown RBP16.32■□□□□ 0.2
IRF1-210ENST00000493208 NACAP1Q9BZK3 213 aa16.32■□□□□ 0.2
IRF1-210ENST00000493208 ARMT1Q9H993 441 aa16.32■□□□□ 0.2
IRF1-210ENST00000493208 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.32■□□□□ 0.2
IRF1-210ENST00000493208 SLC4A4Q9Y6R1 1079 aa16.32■□□□□ 0.2
IRF1-210ENST00000493208 SMARCA5O60264 1052 aaPredicted RBP16.31■□□□□ 0.2
IRF1-210ENST00000493208 FLT3LGP49771 235 aa16.31■□□□□ 0.2
IRF1-210ENST00000493208 HERVK_113P62684 666 aa16.31■□□□□ 0.2
IRF1-210ENST00000493208 GIMAP6Q6P9H5 292 aa16.31■□□□□ 0.2
IRF1-210ENST00000493208 SDR42E1Q8WUS8 393 aa16.31■□□□□ 0.2
IRF1-210ENST00000493208 C12orf42Q96LP6 360 aa16.31■□□□□ 0.2
IRF1-210ENST00000493208 MORF4L1Q9UBU8 362 aa16.31■□□□□ 0.2
IRF1-210ENST00000493208 SLC3A2P08195 630 aaKnown RBP16.3■□□□□ 0.2
IRF1-210ENST00000493208 PLCD1P51178 756 aa16.3■□□□□ 0.2
IRF1-210ENST00000493208 RRP1BQ14684 758 aaKnown RBP16.3■□□□□ 0.2
IRF1-210ENST00000493208 APPBP2Q92624 585 aa16.3■□□□□ 0.2
IRF1-210ENST00000493208 LPAR1Q92633 364 aa16.3■□□□□ 0.2
IRF1-210ENST00000493208 RNF208Q9H0X6 261 aa16.3■□□□□ 0.2
IRF1-210ENST00000493208 ATAD5Q96QE3 1844 aa16.3■□□□□ 0.2
IRF1-210ENST00000493208 LOC285556D6RIA3 1793 aa16.29■□□□□ 0.2
IRF1-210ENST00000493208 POTEFA5A3E0 1075 aa16.29■□□□□ 0.2
IRF1-210ENST00000493208 GJB1P08034 283 aa16.29■□□□□ 0.2
IRF1-210ENST00000493208 SHMT1P34896 483 aa16.29■□□□□ 0.2
IRF1-210ENST00000493208 EDC3Q96F86 508 aaKnown RBP16.29■□□□□ 0.2
IRF1-210ENST00000493208 NUDT12Q9BQG2 462 aa16.29■□□□□ 0.2
IRF1-210ENST00000493208 HOXC10Q9NYD6 342 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms