RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 RIOK1Q9BRS2 568 aaKnown RBP24.94■■□□□ 1.58
CLTA-208ENST00000493185 TMOD4Q9NZQ9 345 aa24.94■■□□□ 1.58
CLTA-208ENST00000493185 ZBTB21Q9ULJ3 1066 aa24.94■■□□□ 1.58
CLTA-208ENST00000493185 BACE1P56817 501 aa24.93■■□□□ 1.58
CLTA-208ENST00000493185 PRKCZQ05513 592 aa24.93■■□□□ 1.58
CLTA-208ENST00000493185 PRPF38BQ5VTL8 546 aaKnown RBP24.93■■□□□ 1.58
CLTA-208ENST00000493185 ANKRD13CQ8N6S4 541 aa24.93■■□□□ 1.58
CLTA-208ENST00000493185 LRRCC1Q9C099 1032 aa24.93■■□□□ 1.58
CLTA-208ENST00000493185 EHD4Q9H223 541 aa24.93■■□□□ 1.58
CLTA-208ENST00000493185 SERPINB13Q9UIV8 391 aa24.93■■□□□ 1.58
CLTA-208ENST00000493185 BRCA2P51587 3418 aa24.92■■□□□ 1.58
CLTA-208ENST00000493185 NAV1Q8NEY1 1877 aa24.92■■□□□ 1.58
CLTA-208ENST00000493185 GRK4P32298 578 aa24.92■■□□□ 1.58
CLTA-208ENST00000493185 GCLCP48506 637 aaPredicted RBP24.92■■□□□ 1.58
CLTA-208ENST00000493185 CRNKL1Q9BZJ0 848 aaKnown RBP24.92■■□□□ 1.58
CLTA-208ENST00000493185 ZNF532Q9HCE3 1301 aa24.91■■□□□ 1.58
CLTA-208ENST00000493185 C19orf81C9J6K1 198 aa24.91■■□□□ 1.58
CLTA-208ENST00000493185 USP17L10C9JJH3 530 aa24.91■■□□□ 1.58
CLTA-208ENST00000493185 TNPO2O14787 897 aaKnown RBP24.91■■□□□ 1.58
CLTA-208ENST00000493185 ATP5JP18859 108 aa24.91■■□□□ 1.58
CLTA-208ENST00000493185 JAG1P78504 1218 aa24.91■■□□□ 1.58
CLTA-208ENST00000493185 FAM110CQ1W6H9 321 aa24.91■■□□□ 1.58
CLTA-208ENST00000493185 ASCC2Q9H1I8 757 aaPredicted RBP24.91■■□□□ 1.58
CLTA-208ENST00000493185 BOLA2Q9H3K6 86 aa24.91■■□□□ 1.58
CLTA-208ENST00000493185 PAG1Q9NWQ8 432 aa24.91■■□□□ 1.58
CLTA-208ENST00000493185 IRX3P78415 501 aaPredicted RBP24.9■■□□□ 1.58
CLTA-208ENST00000493185 SHROOM1Q2M3G4 852 aaPredicted RBP24.9■■□□□ 1.58
CLTA-208ENST00000493185 EDC3Q96F86 508 aaKnown RBP24.9■■□□□ 1.58
CLTA-208ENST00000493185 BIN2Q9UBW5 565 aaPredicted RBP24.9■■□□□ 1.58
CLTA-208ENST00000493185 DDX60LQ5H9U9 1706 aaKnown RBP24.89■■□□□ 1.58
CLTA-208ENST00000493185 GH2P01242 217 aa24.89■■□□□ 1.58
CLTA-208ENST00000493185 POLR3DP05423 398 aaPredicted RBP24.89■■□□□ 1.58
CLTA-208ENST00000493185 TATDN1Q6P1N9 297 aa24.89■■□□□ 1.58
CLTA-208ENST00000493185 SLAIN1Q8ND83 568 aa24.89■■□□□ 1.58
CLTA-208ENST00000493185 HAUS7Q99871 368 aa24.89■■□□□ 1.58
CLTA-208ENST00000493185 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.89■■□□□ 1.58
CLTA-208ENST00000493185 GABRQQ9UN88 632 aa24.89■■□□□ 1.58
CLTA-208ENST00000493185 MKI67P46013 3256 aaKnown RBP24.89■■□□□ 1.57
CLTA-208ENST00000493185 TCRBV5S4A2TA0A5A2 114 aa24.88■■□□□ 1.57
CLTA-208ENST00000493185 UBXN2AP68543 259 aa24.88■■□□□ 1.57
CLTA-208ENST00000493185 COA7Q96BR5 231 aa24.88■■□□□ 1.57
CLTA-208ENST00000493185 DOCK3Q8IZD9 2030 aa24.88■■□□□ 1.57
CLTA-208ENST00000493185 MYH7P12883 1935 aa24.87■■□□□ 1.57
CLTA-208ENST00000493185 FLT3LGP49771 235 aa24.87■■□□□ 1.57
CLTA-208ENST00000493185 CERKLQ49MI3 558 aaPredicted RBP24.87■■□□□ 1.57
CLTA-208ENST00000493185 MCM9Q9NXL9 1143 aa24.87■■□□□ 1.57
CLTA-208ENST00000493185 HOXA7P31268 230 aaPredicted RBP24.86■■□□□ 1.57
CLTA-208ENST00000493185 PLCD1P51178 756 aa24.86■■□□□ 1.57
CLTA-208ENST00000493185 MTFR1Q15390 333 aa24.86■■□□□ 1.57
CLTA-208ENST00000493185 USP17L2Q6R6M4 530 aa24.86■■□□□ 1.57
CLTA-208ENST00000493185 SMARCA5O60264 1052 aaPredicted RBP24.85■■□□□ 1.57
CLTA-208ENST00000493185 ADCY3O60266 1144 aa24.85■■□□□ 1.57
CLTA-208ENST00000493185 ADD2P35612 726 aa24.85■■□□□ 1.57
CLTA-208ENST00000493185 IRF5Q13568 498 aa24.85■■□□□ 1.57
CLTA-208ENST00000493185 RAB3GAP1Q15042 981 aa24.85■■□□□ 1.57
CLTA-208ENST00000493185 ABCB5Q2M3G0 1257 aa24.85■■□□□ 1.57
CLTA-208ENST00000493185 LCORLQ8N3X6 602 aa24.85■■□□□ 1.57
CLTA-208ENST00000493185 SDR42E1Q8WUS8 393 aa24.85■■□□□ 1.57
CLTA-208ENST00000493185 FEZ1Q99689 392 aa24.85■■□□□ 1.57
CLTA-208ENST00000493185 CABP5Q9NP86 173 aa24.85■■□□□ 1.57
CLTA-208ENST00000493185 CCL5P13501 91 aa24.83■■□□□ 1.57
CLTA-208ENST00000493185 SHMT1P34896 483 aa24.83■■□□□ 1.57
CLTA-208ENST00000493185 NKX2-3Q8TAU0 364 aa24.83■■□□□ 1.57
CLTA-208ENST00000493185 PXYLP1Q8TE99 480 aa24.83■■□□□ 1.57
CLTA-208ENST00000493185 GPATCH3Q96I76 525 aa24.83■■□□□ 1.57
CLTA-208ENST00000493185 DCTPP1Q9H773 170 aa24.83■■□□□ 1.57
CLTA-208ENST00000493185 ARMT1Q9H993 441 aa24.83■■□□□ 1.57
CLTA-208ENST00000493185 DCP1AQ9NPI6 582 aaPredicted RBP24.83■■□□□ 1.57
CLTA-208ENST00000493185 EMILIN3Q9NT22 766 aa24.83■■□□□ 1.57
CLTA-208ENST00000493185 MORF4L1Q9UBU8 362 aa24.83■■□□□ 1.57
CLTA-208ENST00000493185 TAOK2Q9UL54 1235 aa24.83■■□□□ 1.57
CLTA-208ENST00000493185 MBD4O95243 580 aa24.82■■□□□ 1.56
CLTA-208ENST00000493185 HERVK_113P62684 666 aa24.82■■□□□ 1.56
CLTA-208ENST00000493185 GABPAQ06546 454 aa24.82■■□□□ 1.56
CLTA-208ENST00000493185 ZSCAN25Q6NSZ9 544 aa24.82■■□□□ 1.56
CLTA-208ENST00000493185 P2RX7Q99572 595 aaKnown RBP24.82■■□□□ 1.56
CLTA-208ENST00000493185 RNF208Q9H0X6 261 aa24.82■■□□□ 1.56
CLTA-208ENST00000493185 ECHDC1Q9NTX5 307 aa24.82■■□□□ 1.56
CLTA-208ENST00000493185 ELNP15502 786 aa24.81■■□□□ 1.56
CLTA-208ENST00000493185 USP14P54578 494 aa24.81■■□□□ 1.56
CLTA-208ENST00000493185 UBE3CQ15386 1083 aa24.81■■□□□ 1.56
CLTA-208ENST00000493185 ZYXQ15942 572 aaKnown RBP24.81■■□□□ 1.56
CLTA-208ENST00000493185 GTF3C2Q8WUA4 911 aaPredicted RBP24.81■■□□□ 1.56
CLTA-208ENST00000493185 C12orf42Q96LP6 360 aa24.81■■□□□ 1.56
CLTA-208ENST00000493185 ATP8A2Q9NTI2 1148 aa24.81■■□□□ 1.56
CLTA-208ENST00000493185 MYH8P13535 1937 aa24.8■■□□□ 1.56
CLTA-208ENST00000493185 GJB1P08034 283 aa24.8■■□□□ 1.56
CLTA-208ENST00000493185 SLFNL1Q499Z3 407 aa24.8■■□□□ 1.56
CLTA-208ENST00000493185 BAZ2AQ9UIF9 1905 aaKnown RBP24.8■■□□□ 1.56
CLTA-208ENST00000493185 INHAP05111 366 aa24.79■■□□□ 1.56
CLTA-208ENST00000493185 GJA8P48165 433 aa24.79■■□□□ 1.56
CLTA-208ENST00000493185 AMOTL1Q8IY63 956 aa24.79■■□□□ 1.56
CLTA-208ENST00000493185 GPRC5AQ8NFJ5 357 aa24.79■■□□□ 1.56
CLTA-208ENST00000493185 DDRGK1Q96HY6 314 aa24.79■■□□□ 1.56
CLTA-208ENST00000493185 KIAA1683Q9H0B3 1180 aa24.79■■□□□ 1.56
CLTA-208ENST00000493185 SWAP70Q9UH65 585 aa24.79■■□□□ 1.56
CLTA-208ENST00000493185 MPHOSPH10O00566 681 aaKnown RBP24.78■■□□□ 1.56
CLTA-208ENST00000493185 SHISA4Q96DD7 197 aa24.78■■□□□ 1.56
CLTA-208ENST00000493185 USP17L15C9J2P7 530 aa24.77■■□□□ 1.56
CLTA-208ENST00000493185 USP17L13C9JLJ4 530 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms