RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 SLIT2O94813 1529 aa9.24□□□□□ -0.93
TPR-208ENST00000492973 AATKQ6ZMQ8 1374 aa9.24□□□□□ -0.93
TPR-208ENST00000492973 BCL9LQ86UU0 1499 aa9.23□□□□□ -0.93
TPR-208ENST00000492973 ABCA3Q99758 1704 aa9.23□□□□□ -0.93
TPR-208ENST00000492973 ANP32CO43423 234 aa9.23□□□□□ -0.93
TPR-208ENST00000492973 EPHA1P21709 976 aa9.23□□□□□ -0.93
TPR-208ENST00000492973 TNNT2P45379 298 aaPredicted RBP9.23□□□□□ -0.93
TPR-208ENST00000492973 CNGB1Q14028 1251 aaPredicted RBP9.23□□□□□ -0.93
TPR-208ENST00000492973 SETDB1Q15047 1291 aa9.23□□□□□ -0.93
TPR-208ENST00000492973 RRS1Q15050 365 aaKnown RBP9.23□□□□□ -0.93
TPR-208ENST00000492973 TCF12Q99081 682 aa9.23□□□□□ -0.93
TPR-208ENST00000492973 SRA1Q9HD15 236 aaKnown RBP9.23□□□□□ -0.93
TPR-208ENST00000492973 SH2B1Q9NRF2 756 aaPredicted RBP9.23□□□□□ -0.93
TPR-208ENST00000492973 BTG4Q9NY30 223 aa9.23□□□□□ -0.93
TPR-208ENST00000492973 POLKQ9UBT6 870 aa9.23□□□□□ -0.93
TPR-208ENST00000492973 SOX13Q9UN79 622 aa9.23□□□□□ -0.93
TPR-208ENST00000492973 PHRF1Q9P1Y6 1649 aaKnown RBP9.23□□□□□ -0.93
TPR-208ENST00000492973 PNMA6FA0A0J9YX94 578 aa9.22□□□□□ -0.93
TPR-208ENST00000492973 PLA2G4EQ3MJ16 856 aa9.22□□□□□ -0.93
TPR-208ENST00000492973 DNAJC14Q6Y2X3 702 aaPredicted RBP9.22□□□□□ -0.93
TPR-208ENST00000492973 CCNJLQ8IV13 435 aa9.22□□□□□ -0.93
TPR-208ENST00000492973 UNC5CLQ8IV45 518 aa9.22□□□□□ -0.93
TPR-208ENST00000492973 USP21Q9UK80 565 aa9.22□□□□□ -0.93
TPR-208ENST00000492973 CAMTA1Q9Y6Y1 1673 aa9.21□□□□□ -0.93
TPR-208ENST00000492973 TM4SF5O14894 197 aa9.21□□□□□ -0.94
TPR-208ENST00000492973 HOXC9P31274 260 aa9.21□□□□□ -0.94
TPR-208ENST00000492973 GRIK4Q16099 956 aa9.21□□□□□ -0.94
TPR-208ENST00000492973 MAP4K3Q8IVH8 894 aa9.21□□□□□ -0.94
TPR-208ENST00000492973 BSNDQ8WZ55 320 aa9.21□□□□□ -0.94
TPR-208ENST00000492973 IP6K1Q92551 441 aa9.21□□□□□ -0.94
TPR-208ENST00000492973 PRKRIP1Q9H875 184 aaPredicted RBP9.21□□□□□ -0.94
TPR-208ENST00000492973 LIN7BQ9HAP6 207 aa9.21□□□□□ -0.94
TPR-208ENST00000492973 LINC01387J3KSC0 135 aa9.2□□□□□ -0.94
TPR-208ENST00000492973 DLL1O00548 723 aa9.2□□□□□ -0.94
TPR-208ENST00000492973 P4HBP07237 508 aaKnown RBP9.2□□□□□ -0.94
TPR-208ENST00000492973 SELPP16109 830 aa9.2□□□□□ -0.94
TPR-208ENST00000492973 CHRNA4P43681 627 aa9.2□□□□□ -0.94
TPR-208ENST00000492973 AMPHP49418 695 aa9.2□□□□□ -0.94
TPR-208ENST00000492973 HSP90AB2PQ58FF8 381 aa9.2□□□□□ -0.94
TPR-208ENST00000492973 ZNF772Q68DY9 489 aaPredicted RBP9.2□□□□□ -0.94
TPR-208ENST00000492973 CD163Q86VB7 1156 aa9.2□□□□□ -0.94
TPR-208ENST00000492973 EPS8L3Q8TE67 593 aaKnown RBP9.2□□□□□ -0.94
TPR-208ENST00000492973 ATRNO75882 1429 aa9.2□□□□□ -0.94
TPR-208ENST00000492973 ANKRD33BA6NCL7 494 aa9.19□□□□□ -0.94
TPR-208ENST00000492973 METTL12A8MUP2 240 aa9.19□□□□□ -0.94
TPR-208ENST00000492973 C1QTNF9BB2RNN3 333 aa9.19□□□□□ -0.94
TPR-208ENST00000492973 H3BRJ5 948 aa9.19□□□□□ -0.94
TPR-208ENST00000492973 MAPK8P45983 427 aa9.19□□□□□ -0.94
TPR-208ENST00000492973 VPS72Q15906 364 aa9.19□□□□□ -0.94
TPR-208ENST00000492973 TXNDC11Q6PKC3 985 aa9.19□□□□□ -0.94
TPR-208ENST00000492973 VN1R5Q7Z5H4 357 aa9.19□□□□□ -0.94
TPR-208ENST00000492973 TRPC5Q9UL62 973 aaPredicted RBP9.19□□□□□ -0.94
TPR-208ENST00000492973 RTL1A6NKG5 1358 aa9.19□□□□□ -0.94
TPR-208ENST00000492973 PARD3Q8TEW0 1356 aa9.19□□□□□ -0.94
TPR-208ENST00000492973 COL5A2P05997 1499 aaPredicted RBP9.19□□□□□ -0.94
TPR-208ENST00000492973 LMO7Q8WWI1 1683 aa9.19□□□□□ -0.94
TPR-208ENST00000492973 KIF20BQ96Q89 1820 aa9.19□□□□□ -0.94
TPR-208ENST00000492973 CCER2I3L3R5 266 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 PPM1GO15355 546 aaPredicted RBP9.18□□□□□ -0.94
TPR-208ENST00000492973 ABCC6O95255 1503 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 PPP2R1AP30153 589 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 FLT4P35916 1363 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 COL18A1P39060 1754 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 GRIA4P48058 902 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 COL14A1Q05707 1796 aaKnown RBP9.18□□□□□ -0.94
TPR-208ENST00000492973 COL19A1Q14993 1142 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 CCDC27Q2M243 656 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 KIF24Q5T7B8 1368 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 SPATA31A5Q5VU36 1347 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 PRPF40BQ6NWY9 871 aaKnown RBP9.18□□□□□ -0.94
TPR-208ENST00000492973 SHISA2Q6UWI4 295 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 PI16Q6UXB8 463 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 SMG6Q86US8 1419 aaKnown RBP9.18□□□□□ -0.94
TPR-208ENST00000492973 SPATA31A7Q8IWB4 1347 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 GALNT11Q8NCW6 608 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 ASAP3Q8TDY4 903 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 FBF1Q8TES7 1133 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 ANKRD24Q8TF21 1146 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 LENG1Q96BZ8 264 aaPredicted RBP9.18□□□□□ -0.94
TPR-208ENST00000492973 NACC1Q96RE7 527 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 SETDB2Q96T68 719 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 EHD4Q9H223 541 aa9.18□□□□□ -0.94
TPR-208ENST00000492973 BLMP54132 1417 aaPredicted RBP9.17□□□□□ -0.94
TPR-208ENST00000492973 INSRP06213 1382 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 WDR17Q8IZU2 1322 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 FAM177BA6PVY3 158 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 FSCN2O14926 492 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 APBA3O96018 575 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 CDC25BP30305 580 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 MTHFSP49914 203 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 CABP4P57796 275 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 EVA1CP58658 441 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 RALBP1Q15311 655 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 NPAS4Q8IUM7 802 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 GLIS3Q8NEA6 775 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 WNT8BQ93098 351 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 LTV1Q96GA3 475 aaPredicted RBP9.17□□□□□ -0.94
TPR-208ENST00000492973 ABCB6Q9NP58 842 aa9.17□□□□□ -0.94
TPR-208ENST00000492973 SPATA31A1Q5TZJ5 1347 aa9.16□□□□□ -0.94
TPR-208ENST00000492973 A0A096LPE4 126 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms