RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 USP17L5A8MUK1 530 aa17.78■□□□□ 0.44
SS18L1-205ENST00000492466 BAG3O95817 575 aa17.78■□□□□ 0.44
SS18L1-205ENST00000492466 HMGCS2P54868 508 aa17.78■□□□□ 0.44
SS18L1-205ENST00000492466 MAP3K12Q12852 859 aa17.78■□□□□ 0.44
SS18L1-205ENST00000492466 IRF5Q13568 498 aa17.78■□□□□ 0.44
SS18L1-205ENST00000492466 SHROOM1Q2M3G4 852 aaPredicted RBP17.78■□□□□ 0.44
SS18L1-205ENST00000492466 MAPKAPK5Q8IW41 473 aa17.78■□□□□ 0.44
SS18L1-205ENST00000492466 SLAIN1Q8ND83 568 aa17.78■□□□□ 0.44
SS18L1-205ENST00000492466 PXYLP1Q8TE99 480 aa17.78■□□□□ 0.44
SS18L1-205ENST00000492466 TBC1D2Q9BYX2 928 aa17.78■□□□□ 0.44
SS18L1-205ENST00000492466 DHX36Q9H2U1 1008 aaKnown RBP17.78■□□□□ 0.44
SS18L1-205ENST00000492466 GOLIM4O00461 696 aa17.77■□□□□ 0.44
SS18L1-205ENST00000492466 ADCY3O60266 1144 aa17.77■□□□□ 0.44
SS18L1-205ENST00000492466 IGSF3O75054 1194 aa17.77■□□□□ 0.44
SS18L1-205ENST00000492466 ELNP15502 786 aa17.77■□□□□ 0.44
SS18L1-205ENST00000492466 PLCG2P16885 1265 aa17.77■□□□□ 0.44
SS18L1-205ENST00000492466 FAM110CQ1W6H9 321 aa17.77■□□□□ 0.44
SS18L1-205ENST00000492466 WDR18Q9BV38 432 aa17.77■□□□□ 0.44
SS18L1-205ENST00000492466 RNF208Q9H0X6 261 aa17.77■□□□□ 0.44
SS18L1-205ENST00000492466 UNC93B1Q9H1C4 597 aa17.77■□□□□ 0.44
SS18L1-205ENST00000492466 RWDD1Q9H446 243 aaPredicted RBP17.77■□□□□ 0.44
SS18L1-205ENST00000492466 PALD1Q9ULE6 856 aa17.77■□□□□ 0.44
SS18L1-205ENST00000492466 H0YGN5 161 aa17.76■□□□□ 0.43
SS18L1-205ENST00000492466 TNPO2O14787 897 aaKnown RBP17.76■□□□□ 0.43
SS18L1-205ENST00000492466 DYNLL1P63167 89 aaKnown RBP17.76■□□□□ 0.43
SS18L1-205ENST00000492466 UBXN2AP68543 259 aa17.76■□□□□ 0.43
SS18L1-205ENST00000492466 FOXP4Q8IVH2 680 aaPredicted RBP17.76■□□□□ 0.43
SS18L1-205ENST00000492466 NKX2-3Q8TAU0 364 aa17.76■□□□□ 0.43
SS18L1-205ENST00000492466 ASCC2Q9H1I8 757 aaPredicted RBP17.76■□□□□ 0.43
SS18L1-205ENST00000492466 BOLA2Q9H3K6 86 aa17.76■□□□□ 0.43
SS18L1-205ENST00000492466 PNMA3Q9UL41 463 aa17.76■□□□□ 0.43
SS18L1-205ENST00000492466 COLQQ9Y215 455 aaPredicted RBP17.76■□□□□ 0.43
SS18L1-205ENST00000492466 NAV1Q8NEY1 1877 aa17.75■□□□□ 0.43
SS18L1-205ENST00000492466 CYP7A1P22680 504 aa17.75■□□□□ 0.43
SS18L1-205ENST00000492466 BACE1P56817 501 aa17.75■□□□□ 0.43
SS18L1-205ENST00000492466 HDAC1Q13547 482 aaPredicted RBP17.75■□□□□ 0.43
SS18L1-205ENST00000492466 ANKRD45Q5TZF3 282 aa17.75■□□□□ 0.43
SS18L1-205ENST00000492466 MAGEB6Q8N7X4 407 aa17.75■□□□□ 0.43
SS18L1-205ENST00000492466 U2AF1L4Q8WU68 220 aaKnown RBP17.75■□□□□ 0.43
SS18L1-205ENST00000492466 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.75■□□□□ 0.43
SS18L1-205ENST00000492466 ANTXR1Q9H6X2 564 aa17.75■□□□□ 0.43
SS18L1-205ENST00000492466 ECHDC1Q9NTX5 307 aa17.75■□□□□ 0.43
SS18L1-205ENST00000492466 PAG1Q9NWQ8 432 aa17.75■□□□□ 0.43
SS18L1-205ENST00000492466 BIN2Q9UBW5 565 aaPredicted RBP17.75■□□□□ 0.43
SS18L1-205ENST00000492466 GJD2Q9UKL4 321 aa17.75■□□□□ 0.43
SS18L1-205ENST00000492466 TRIOBPQ9H2D6 2365 aa17.74■□□□□ 0.43
SS18L1-205ENST00000492466 SGPL1O95470 568 aa17.74■□□□□ 0.43
SS18L1-205ENST00000492466 INHAP05111 366 aa17.74■□□□□ 0.43
SS18L1-205ENST00000492466 ASNSP08243 561 aa17.74■□□□□ 0.43
SS18L1-205ENST00000492466 ATP5JP18859 108 aa17.74■□□□□ 0.43
SS18L1-205ENST00000492466 GCLCP48506 637 aaPredicted RBP17.74■□□□□ 0.43
SS18L1-205ENST00000492466 FXR1P51114 621 aaKnown RBP eCLIP17.74■□□□□ 0.43
SS18L1-205ENST00000492466 MYH1P12882 1939 aa17.74■□□□□ 0.43
SS18L1-205ENST00000492466 HOXA7P31268 230 aaPredicted RBP17.73■□□□□ 0.43
SS18L1-205ENST00000492466 MTMR2Q13614 643 aa17.73■□□□□ 0.43
SS18L1-205ENST00000492466 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.73■□□□□ 0.434e-6■■■■□ 22.8
SS18L1-205ENST00000492466 AS3MTQ9HBK9 375 aa17.73■□□□□ 0.43
SS18L1-205ENST00000492466 PAK6Q9NQU5 681 aaPredicted RBP17.73■□□□□ 0.43
SS18L1-205ENST00000492466 MORF4L1Q9UBU8 362 aa17.73■□□□□ 0.43
SS18L1-205ENST00000492466 SAP30BPQ9UHR5 308 aaKnown RBP17.73■□□□□ 0.43
SS18L1-205ENST00000492466 DNAH12Q6ZR08 3092 aa17.73■□□□□ 0.43
SS18L1-205ENST00000492466 ERC2O15083 957 aa17.72■□□□□ 0.43
SS18L1-205ENST00000492466 PEX10O60683 326 aa17.72■□□□□ 0.43
SS18L1-205ENST00000492466 GDF11O95390 407 aa17.72■□□□□ 0.43
SS18L1-205ENST00000492466 TSHZ3Q63HK5 1081 aa17.72■□□□□ 0.43
SS18L1-205ENST00000492466 POTEEQ6S8J3 1075 aa17.72■□□□□ 0.43
SS18L1-205ENST00000492466 MIGA1Q8NAN2 632 aa17.72■□□□□ 0.43
SS18L1-205ENST00000492466 COA7Q96BR5 231 aa17.72■□□□□ 0.43
SS18L1-205ENST00000492466 ZBTB21Q9ULJ3 1066 aa17.72■□□□□ 0.43
SS18L1-205ENST00000492466 PLXNB2O15031 1838 aa17.72■□□□□ 0.43
SS18L1-205ENST00000492466 PABPC4Q13310 644 aaKnown RBP eCLIP17.71■□□□□ 0.43
SS18L1-205ENST00000492466 EDC3Q96F86 508 aaKnown RBP17.71■□□□□ 0.43
SS18L1-205ENST00000492466 P2RX7Q99572 595 aaKnown RBP17.71■□□□□ 0.43
SS18L1-205ENST00000492466 HAUS7Q99871 368 aa17.71■□□□□ 0.43
SS18L1-205ENST00000492466 CRISPLD2Q9H0B8 497 aa17.71■□□□□ 0.43
SS18L1-205ENST00000492466 TXNRD2Q9NNW7 524 aa17.71■□□□□ 0.43
SS18L1-205ENST00000492466 GINM1Q9NU53 330 aa17.71■□□□□ 0.43
SS18L1-205ENST00000492466 C19orf81C9J6K1 198 aa17.7■□□□□ 0.42
SS18L1-205ENST00000492466 USP17L10C9JJH3 530 aa17.7■□□□□ 0.42
SS18L1-205ENST00000492466 MX1P20591 662 aa17.7■□□□□ 0.42
SS18L1-205ENST00000492466 SLC9C2Q5TAH2 1124 aa17.7■□□□□ 0.42
SS18L1-205ENST00000492466 B4GALNT3Q6L9W6 998 aa17.7■□□□□ 0.42
SS18L1-205ENST00000492466 TATDN1Q6P1N9 297 aa17.7■□□□□ 0.42
SS18L1-205ENST00000492466 CERS3Q8IU89 383 aa17.7■□□□□ 0.42
SS18L1-205ENST00000492466 CRACR2BQ8N4Y2 399 aaPredicted RBP17.7■□□□□ 0.42
SS18L1-205ENST00000492466 DEFB118Q96PH6 123 aa17.7■□□□□ 0.42
SS18L1-205ENST00000492466 EMILIN3Q9NT22 766 aa17.7■□□□□ 0.42
SS18L1-205ENST00000492466 TTC41PQ6P2S7 1318 aa17.7■□□□□ 0.42
SS18L1-205ENST00000492466 FARP2O94887 1054 aaPredicted RBP17.69■□□□□ 0.42
SS18L1-205ENST00000492466 PDE6AP16499 860 aa17.69■□□□□ 0.42
SS18L1-205ENST00000492466 USP5P45974 858 aa17.69■□□□□ 0.42
SS18L1-205ENST00000492466 ZSCAN25Q6NSZ9 544 aa17.69■□□□□ 0.42
SS18L1-205ENST00000492466 TMED8Q6PL24 325 aaPredicted RBP17.69■□□□□ 0.42
SS18L1-205ENST00000492466 DPF3Q92784 378 aa17.69■□□□□ 0.42
SS18L1-205ENST00000492466 RIOK1Q9BRS2 568 aaKnown RBP17.69■□□□□ 0.42
SS18L1-205ENST00000492466 TRIM34Q9BYJ4 488 aa17.69■□□□□ 0.42
SS18L1-205ENST00000492466 PRO3102Q9H379 93 aa17.69■□□□□ 0.42
SS18L1-205ENST00000492466 RBPJLQ9UBG7 517 aa17.69■□□□□ 0.42
SS18L1-205ENST00000492466 MAGEB6P1A0A0J9YX57 407 aa17.68■□□□□ 0.42
SS18L1-205ENST00000492466 HLA-DOAP06340 250 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms