RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TMEM238LA0A1B0GVL6 79 aa5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 RBM47A0AV96 593 aaKnown RBP5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 UNCXA6NJT0 531 aa5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 SRFP11831 508 aa5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 PDE3BQ13370 1112 aa5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 CDKAL1Q5VV42 579 aa5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 PRPF40BQ6NWY9 871 aaKnown RBP5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 MFSD4AQ8N468 514 aa5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 MYLIPQ8WY64 445 aa5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 RNF19AQ9NV58 838 aa5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 TMEM39AQ9NV64 488 aa5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 SLAMF8Q9P0V8 285 aa5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 WWC3Q9ULE0 1092 aa5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 TPX2Q9ULW0 747 aaKnown RBP5.07□□□□□ -1.6
HMGB1P30-201ENST00000492455 CNTNAP4Q9C0A0 1308 aa5.06□□□□□ -1.6
HMGB1P30-201ENST00000492455 H3BS24 57 aa5.06□□□□□ -1.6
HMGB1P30-201ENST00000492455 RFXAPO00287 272 aa5.06□□□□□ -1.6
HMGB1P30-201ENST00000492455 CPNE3O75131 537 aaKnown RBP5.06□□□□□ -1.6
HMGB1P30-201ENST00000492455 ZNF16P17020 682 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P30-201ENST00000492455 ENOX2Q16206 610 aaKnown RBP5.06□□□□□ -1.6
HMGB1P30-201ENST00000492455 TCERG1LQ5VWI1 586 aa5.06□□□□□ -1.6
HMGB1P30-201ENST00000492455 USPL1Q5W0Q7 1092 aa5.06□□□□□ -1.6
HMGB1P30-201ENST00000492455 DTHD1Q6ZMT9 781 aa5.06□□□□□ -1.6
HMGB1P30-201ENST00000492455 KCT2Q8NC54 265 aa5.06□□□□□ -1.6
HMGB1P30-201ENST00000492455 EMILIN2Q9BXX0 1053 aa5.06□□□□□ -1.6
HMGB1P30-201ENST00000492455 PPP4R2Q9NY27 417 aa5.06□□□□□ -1.6
HMGB1P30-201ENST00000492455 A0A0G2JLL6 359 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 PLCB3Q01970 1234 aa5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 FAAP100Q0VG06 881 aa5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 SFRP5Q5T4F7 317 aa5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 MAP1SQ66K74 1059 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 THAP5Q7Z6K1 395 aa5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 PRRT2Q7Z6L0 340 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 TMEM151BQ8IW70 566 aa5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 SULF2Q8IWU5 870 aa5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 TMC1Q8TDI8 760 aa5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 GIPC2Q8TF65 315 aa5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 BCL2L13Q9BXK5 485 aa5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 SEMA3GQ9NS98 782 aa5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 CNOT6Q9ULM6 557 aaKnown RBP5.05□□□□□ -1.6
HMGB1P30-201ENST00000492455 PNMA6FA0A0J9YX94 578 aa5.04□□□□□ -1.6
HMGB1P30-201ENST00000492455 EIF1AYO14602 144 aaKnown RBP5.04□□□□□ -1.6
HMGB1P30-201ENST00000492455 EOMESO95936 686 aa5.04□□□□□ -1.6
HMGB1P30-201ENST00000492455 MAPK8P45983 427 aa5.04□□□□□ -1.6
HMGB1P30-201ENST00000492455 ZNF385BQ569K4 471 aa5.04□□□□□ -1.6
HMGB1P30-201ENST00000492455 BAHD1Q8TBE0 780 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P30-201ENST00000492455 RTEL1Q9NZ71 1219 aa5.04□□□□□ -1.6
HMGB1P30-201ENST00000492455 KIAA1522Q9P206 1035 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P30-201ENST00000492455 FANCGO15287 622 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 SEMA7AO75326 666 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 SASH1O94885 1247 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 ARNTP27540 789 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 HK2P52789 917 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 EAPPQ56P03 285 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 PPM1JQ5JR12 505 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 TMEM132EQ6IEE7 984 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 ZNF746Q6NUN9 644 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 PI16Q6UXB8 463 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 ARMCX6Q7L4S7 300 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 PDZD3Q86UT5 571 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 CXorf38Q8TB03 319 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 GPBAR1Q8TDU6 330 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 KCNC2Q96PR1 638 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 CBX8Q9HC52 389 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 TMEM59LQ9UK28 342 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 CSADQ9Y600 493 aa5.03□□□□□ -1.6
HMGB1P30-201ENST00000492455 LRIG2O94898 1065 aa5.02□□□□□ -1.61
HMGB1P30-201ENST00000492455 LDHBP07195 334 aaKnown RBP5.02□□□□□ -1.61
HMGB1P30-201ENST00000492455 CELA3BP08861 270 aa5.02□□□□□ -1.61
HMGB1P30-201ENST00000492455 DLG4P78352 724 aa5.02□□□□□ -1.61
HMGB1P30-201ENST00000492455 FGD1P98174 961 aa5.02□□□□□ -1.61
HMGB1P30-201ENST00000492455 C22orf34Q6ZV56 151 aa5.02□□□□□ -1.61
HMGB1P30-201ENST00000492455 UBE2FQ969M7 185 aa5.02□□□□□ -1.61
HMGB1P30-201ENST00000492455 SLC6A17Q9H1V8 727 aa5.02□□□□□ -1.61
HMGB1P30-201ENST00000492455 DNAJC25Q9H1X3 360 aa5.02□□□□□ -1.61
HMGB1P30-201ENST00000492455 TMPRSS5Q9H3S3 457 aa5.02□□□□□ -1.61
HMGB1P30-201ENST00000492455 PRPF40AO75400 957 aaKnown RBP5.01□□□□□ -1.61
HMGB1P30-201ENST00000492455 XRCC5P13010 732 aaKnown RBP5.01□□□□□ -1.61
HMGB1P30-201ENST00000492455 IRF2BP1Q8IU81 584 aa5.01□□□□□ -1.61
HMGB1P30-201ENST00000492455 MARCH10Q8NA82 808 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P30-201ENST00000492455 EPS8L3Q8TE67 593 aaKnown RBP5.01□□□□□ -1.61
HMGB1P30-201ENST00000492455 CCDC74AQ96AQ1 378 aa5.01□□□□□ -1.61
HMGB1P30-201ENST00000492455 DUSP9Q99956 384 aaKnown RBP5.01□□□□□ -1.61
HMGB1P30-201ENST00000492455 ZSWIM5Q9P217 1185 aa5.01□□□□□ -1.61
HMGB1P30-201ENST00000492455 DCDC2CA8MYV0 355 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 PRR33A8MZF0 331 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 HPXP02790 462 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 ADRB1P08588 477 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 NME2P22392 152 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 CYP7A1P22680 504 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 RBM25P49756 843 aaKnown RBP5□□□□□ -1.61
HMGB1P30-201ENST00000492455 FCGRTP55899 365 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 MRPL58Q14197 206 aaKnown RBP5□□□□□ -1.61
HMGB1P30-201ENST00000492455 GRM2Q14416 872 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 LDLRAD1Q5T700 205 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 TMPRSS7Q7RTY8 843 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 ZNF605Q86T29 641 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 GGNQ86UU5 652 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 ZNF507Q8TCN5 953 aa5□□□□□ -1.61
HMGB1P30-201ENST00000492455 FAM161BQ96MY7 647 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms