RNA–Protein interactions for RNA: ENST00000492422.1

CCDC30-210, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-210ENST00000492422 PRR19A6NJB7 356 aa8.19□□□□□ -1.1
CCDC30-210ENST00000492422 LRIG2O94898 1065 aa8.19□□□□□ -1.1
CCDC30-210ENST00000492422 PGRP06401 933 aa8.19□□□□□ -1.1
CCDC30-210ENST00000492422 DNAJA1P31689 397 aaKnown RBP8.19□□□□□ -1.1
CCDC30-210ENST00000492422 CRKP46108 304 aa8.19□□□□□ -1.1
CCDC30-210ENST00000492422 CDK5R2Q13319 367 aa8.19□□□□□ -1.1
CCDC30-210ENST00000492422 SLBPQ14493 270 aaKnown RBP eCLIP8.19□□□□□ -1.1
CCDC30-210ENST00000492422 DUSP27Q5VZP5 1158 aa8.19□□□□□ -1.1
CCDC30-210ENST00000492422 UBE3DQ7Z6J8 389 aa8.19□□□□□ -1.1
CCDC30-210ENST00000492422 OSBPL1AQ9BXW6 950 aa8.19□□□□□ -1.1
CCDC30-210ENST00000492422 FBRSQ9HAH7 460 aa8.19□□□□□ -1.1
CCDC30-210ENST00000492422 UBP1Q9NZI7 540 aa8.19□□□□□ -1.1
CCDC30-210ENST00000492422 PRR36Q9H6K5 1346 aa8.19□□□□□ -1.1
CCDC30-210ENST00000492422 FAM170BA6NMN3 283 aa8.18□□□□□ -1.1
CCDC30-210ENST00000492422 ATP2B1P20020 1258 aa8.18□□□□□ -1.1
CCDC30-210ENST00000492422 APOBRQ0VD83 1088 aa8.18□□□□□ -1.1
CCDC30-210ENST00000492422 STRIP2Q9ULQ0 834 aa8.18□□□□□ -1.1
CCDC30-210ENST00000492422 TLR3O15455 904 aaKnown RBP8.17□□□□□ -1.1
CCDC30-210ENST00000492422 FAM87AP0C7U9 286 aa8.17□□□□□ -1.1
CCDC30-210ENST00000492422 RBL2Q08999 1139 aa8.17□□□□□ -1.1
CCDC30-210ENST00000492422 CYP27C1Q4G0S4 372 aa8.17□□□□□ -1.1
CCDC30-210ENST00000492422 SLC6A19Q695T7 634 aa8.17□□□□□ -1.1
CCDC30-210ENST00000492422 ARMCX6Q7L4S7 300 aa8.17□□□□□ -1.1
CCDC30-210ENST00000492422 MFSD2AQ8NA29 543 aa8.17□□□□□ -1.1
CCDC30-210ENST00000492422 NKD1Q969G9 470 aa8.17□□□□□ -1.1
CCDC30-210ENST00000492422 DUSP23Q9BVJ7 150 aa8.17□□□□□ -1.1
CCDC30-210ENST00000492422 FOXQ1Q9C009 403 aa8.17□□□□□ -1.1
CCDC30-210ENST00000492422 GINM1Q9NU53 330 aa8.17□□□□□ -1.1
CCDC30-210ENST00000492422 TJP2Q9UDY2 1190 aa8.17□□□□□ -1.1
CCDC30-210ENST00000492422 LEMD3Q9Y2U8 911 aa8.17□□□□□ -1.1
CCDC30-210ENST00000492422 POLR3KQ9Y2Y1 108 aaPredicted RBP8.17□□□□□ -1.1
CCDC30-210ENST00000492422 CORINQ9Y5Q5 1042 aa8.17□□□□□ -1.1
CCDC30-210ENST00000492422 TGFB1P01137 390 aa8.16□□□□□ -1.1
CCDC30-210ENST00000492422 PLCG1P19174 1290 aa8.16□□□□□ -1.1
CCDC30-210ENST00000492422 NKG7Q16617 165 aa8.16□□□□□ -1.1
CCDC30-210ENST00000492422 TMEM201Q5SNT2 666 aa8.16□□□□□ -1.1
CCDC30-210ENST00000492422 ZNF765Q7L2R6 523 aa8.16□□□□□ -1.1
CCDC30-210ENST00000492422 MCATQ8IVS2 390 aaKnown RBP8.16□□□□□ -1.1
CCDC30-210ENST00000492422 MRPL41Q8IXM3 137 aaKnown RBP8.16□□□□□ -1.1
CCDC30-210ENST00000492422 REXO1Q8N1G1 1221 aaKnown RBP8.16□□□□□ -1.1
CCDC30-210ENST00000492422 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.16□□□□□ -1.1
CCDC30-210ENST00000492422 PRDM10Q9NQV6 1147 aa8.16□□□□□ -1.1
CCDC30-210ENST00000492422 PIM2Q9P1W9 311 aa8.16□□□□□ -1.1
CCDC30-210ENST00000492422 EFR3BQ9Y2G0 817 aa8.16□□□□□ -1.1
CCDC30-210ENST00000492422 CST3P01034 146 aaPredicted RBP8.15□□□□□ -1.1
CCDC30-210ENST00000492422 ZMYM1Q5SVZ6 1142 aa8.15□□□□□ -1.1
CCDC30-210ENST00000492422 TOP6BLQ8N6T0 577 aa8.15□□□□□ -1.1
CCDC30-210ENST00000492422 ACSF2Q96CM8 615 aaPredicted RBP8.15□□□□□ -1.1
CCDC30-210ENST00000492422 TMEM87BQ96K49 555 aa8.15□□□□□ -1.1
CCDC30-210ENST00000492422 BRMS1Q9HCU9 246 aa8.15□□□□□ -1.1
CCDC30-210ENST00000492422 GRIN3BO60391 1043 aa8.14□□□□□ -1.11
CCDC30-210ENST00000492422 LEFTY1O75610 366 aa8.14□□□□□ -1.11
CCDC30-210ENST00000492422 HTR3BO95264 441 aa8.14□□□□□ -1.11
CCDC30-210ENST00000492422 GRIK1P39086 918 aa8.14□□□□□ -1.11
CCDC30-210ENST00000492422 NASPP49321 788 aaPredicted RBP8.14□□□□□ -1.11
CCDC30-210ENST00000492422 SEZ6Q53EL9 994 aa8.14□□□□□ -1.11
CCDC30-210ENST00000492422 INTS5Q6P9B9 1019 aaKnown RBP8.14□□□□□ -1.11
CCDC30-210ENST00000492422 CYP26A1O43174 497 aa8.13□□□□□ -1.11
CCDC30-210ENST00000492422 COBLO75128 1261 aa8.13□□□□□ -1.11
CCDC30-210ENST00000492422 ATE1O95260 518 aa8.13□□□□□ -1.11
CCDC30-210ENST00000492422 FOSL1P15407 271 aa8.13□□□□□ -1.11
CCDC30-210ENST00000492422 ZNF165P49910 485 aa8.13□□□□□ -1.11
CCDC30-210ENST00000492422 PRAMEF13Q5VWM6 474 aa8.13□□□□□ -1.11
CCDC30-210ENST00000492422 EHMT1Q9H9B1 1298 aa8.13□□□□□ -1.11
CCDC30-210ENST00000492422 REV1Q9UBZ9 1251 aa8.13□□□□□ -1.11
CCDC30-210ENST00000492422 PCDHB14Q9Y5E9 798 aa8.13□□□□□ -1.11
CCDC30-210ENST00000492422 MCM4P33991 863 aa8.12□□□□□ -1.11
CCDC30-210ENST00000492422 YARSP54577 528 aaKnown RBP8.12□□□□□ -1.11
CCDC30-210ENST00000492422 MLECQ14165 292 aa8.12□□□□□ -1.11
CCDC30-210ENST00000492422 FAM13CQ8NE31 585 aa8.12□□□□□ -1.11
CCDC30-210ENST00000492422 HIRIP3Q9BW71 556 aaPredicted RBP8.12□□□□□ -1.11
CCDC30-210ENST00000492422 SLITRK5O94991 958 aa8.11□□□□□ -1.11
CCDC30-210ENST00000492422 GTF2F1P35269 517 aaKnown RBP eCLIP8.11□□□□□ -1.11
CCDC30-210ENST00000492422 SOGA3Q5TF21 947 aa8.11□□□□□ -1.11
CCDC30-210ENST00000492422 FAM214BQ7L5A3 538 aa8.11□□□□□ -1.11
CCDC30-210ENST00000492422 DHX38Q92620 1227 aaKnown RBP8.11□□□□□ -1.11
CCDC30-210ENST00000492422 MIPEPQ99797 713 aa8.11□□□□□ -1.11
CCDC30-210ENST00000492422 PPP1R1BQ9UD71 204 aaPredicted RBP8.11□□□□□ -1.11
CCDC30-210ENST00000492422 UPK3BL1B0FP48 263 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 UPK3BL2E5RIL1 263 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 EOMESO95936 686 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 IMPDH2P12268 514 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 CD97P48960 835 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 CLCQ05315 142 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 LETMD1Q6P1Q0 360 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 GK5Q6ZS86 529 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 SLFN12Q8IYM2 578 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 RBBP8NLQ8NC74 664 aaPredicted RBP8.1□□□□□ -1.11
CCDC30-210ENST00000492422 SHDQ96IW2 340 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 DPH2Q9BQC3 489 aaPredicted RBP8.1□□□□□ -1.11
CCDC30-210ENST00000492422 MKNK2Q9HBH9 465 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 LRRC4CQ9HCJ2 640 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 GTF2IRD1Q9UHL9 959 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 ZNRF3Q9ULT6 936 aa8.1□□□□□ -1.11
CCDC30-210ENST00000492422 IGF2BP3O00425 579 aaKnown RBP eCLIP8.09□□□□□ -1.11
CCDC30-210ENST00000492422 STK10O94804 968 aaKnown RBP8.09□□□□□ -1.11
CCDC30-210ENST00000492422 SSBP05455 408 aaKnown RBP eCLIP8.09□□□□□ -1.11
CCDC30-210ENST00000492422 HOXA10P31260 410 aaPredicted RBP8.09□□□□□ -1.11
CCDC30-210ENST00000492422 NBPF6Q5VWK0 638 aa8.09□□□□□ -1.11
CCDC30-210ENST00000492422 ZNF746Q6NUN9 644 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms