RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 SH3D19Q5HYK7 790 aa18.14■□□□□ 0.49
TOM1-215ENST00000491987 SDR42E1Q8WUS8 393 aa18.14■□□□□ 0.49
TOM1-215ENST00000491987 WDR18Q9BV38 432 aa18.14■□□□□ 0.49
TOM1-215ENST00000491987 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.14■□□□□ 0.49
TOM1-215ENST00000491987 EHD4Q9H223 541 aa18.14■□□□□ 0.49
TOM1-215ENST00000491987 ARMT1Q9H993 441 aa18.14■□□□□ 0.49
TOM1-215ENST00000491987 PNMA3Q9UL41 463 aa18.14■□□□□ 0.49
TOM1-215ENST00000491987 GH2P01242 217 aa18.13■□□□□ 0.49
TOM1-215ENST00000491987 POLR3DP05423 398 aaPredicted RBP18.13■□□□□ 0.49
TOM1-215ENST00000491987 OSBPP22059 807 aa18.13■□□□□ 0.49
TOM1-215ENST00000491987 PLCD1P51178 756 aa18.13■□□□□ 0.49
TOM1-215ENST00000491987 PRMT2P55345 433 aa18.13■□□□□ 0.49
TOM1-215ENST00000491987 BACE1P56817 501 aa18.13■□□□□ 0.49
TOM1-215ENST00000491987 TATDN1Q6P1N9 297 aa18.13■□□□□ 0.49
TOM1-215ENST00000491987 SH3TC2Q8TF17 1288 aa18.13■□□□□ 0.49
TOM1-215ENST00000491987 CRBNQ96SW2 442 aa18.13■□□□□ 0.49
TOM1-215ENST00000491987 ECHDC1Q9NTX5 307 aa18.13■□□□□ 0.49
TOM1-215ENST00000491987 GINM1Q9NU53 330 aa18.13■□□□□ 0.49
TOM1-215ENST00000491987 MCM9Q9NXL9 1143 aa18.13■□□□□ 0.49
TOM1-215ENST00000491987 SRRDQ9UH36 339 aa18.13■□□□□ 0.49
TOM1-215ENST00000491987 POTEFA5A3E0 1075 aa18.12■□□□□ 0.49
TOM1-215ENST00000491987 MBD4O95243 580 aa18.12■□□□□ 0.49
TOM1-215ENST00000491987 HOXD10P28358 340 aa18.12■□□□□ 0.49
TOM1-215ENST00000491987 FCGRTP55899 365 aa18.12■□□□□ 0.49
TOM1-215ENST00000491987 EVX2Q03828 476 aa18.12■□□□□ 0.49
TOM1-215ENST00000491987 PABPC4Q13310 644 aaKnown RBP eCLIP18.12■□□□□ 0.49
TOM1-215ENST00000491987 TSHZ3Q63HK5 1081 aa18.12■□□□□ 0.49
TOM1-215ENST00000491987 NBPF11Q86T75 865 aa18.12■□□□□ 0.49
TOM1-215ENST00000491987 ZNF333Q96JL9 665 aa18.12■□□□□ 0.49
TOM1-215ENST00000491987 TMOD4Q9NZQ9 345 aa18.12■□□□□ 0.49
TOM1-215ENST00000491987 MYPNQ86TC9 1320 aa18.12■□□□□ 0.49
TOM1-215ENST00000491987 PRKAB2O43741 272 aa18.11■□□□□ 0.49
TOM1-215ENST00000491987 GPATCH3Q96I76 525 aa18.11■□□□□ 0.49
TOM1-215ENST00000491987 DCP1AQ9NPI6 582 aaPredicted RBP18.11■□□□□ 0.49
TOM1-215ENST00000491987 USP17L10C9JJH3 530 aa18.1■□□□□ 0.49
TOM1-215ENST00000491987 MYCP01106 439 aaPredicted RBP18.1■□□□□ 0.49
TOM1-215ENST00000491987 CYP2D6P10635 497 aa18.1■□□□□ 0.49
TOM1-215ENST00000491987 SHMT1P34896 483 aa18.1■□□□□ 0.49
TOM1-215ENST00000491987 PRKCZQ05513 592 aa18.1■□□□□ 0.49
TOM1-215ENST00000491987 UBE3CQ15386 1083 aa18.1■□□□□ 0.49
TOM1-215ENST00000491987 CERKLQ49MI3 558 aaPredicted RBP18.1■□□□□ 0.49
TOM1-215ENST00000491987 ZSCAN25Q6NSZ9 544 aa18.1■□□□□ 0.49
TOM1-215ENST00000491987 ANKRD13CQ8N6S4 541 aa18.1■□□□□ 0.49
TOM1-215ENST00000491987 RAET1EQ8TD07 263 aa18.1■□□□□ 0.49
TOM1-215ENST00000491987 ASCC2Q9H1I8 757 aaPredicted RBP18.1■□□□□ 0.49
TOM1-215ENST00000491987 C19orf81C9J6K1 198 aa18.09■□□□□ 0.49
TOM1-215ENST00000491987 GABPAQ06546 454 aa18.09■□□□□ 0.49
TOM1-215ENST00000491987 RAB3GAP1Q15042 981 aa18.09■□□□□ 0.49
TOM1-215ENST00000491987 ABCB5Q2M3G0 1257 aa18.09■□□□□ 0.49
TOM1-215ENST00000491987 MYH7P12883 1935 aa18.09■□□□□ 0.49
TOM1-215ENST00000491987 RBBP6Q7Z6E9 1792 aaKnown RBP18.09■□□□□ 0.49
TOM1-215ENST00000491987 MGAMO43451 1857 aa18.08■□□□□ 0.49
TOM1-215ENST00000491987 TNPO2O14787 897 aaKnown RBP18.08■□□□□ 0.48
TOM1-215ENST00000491987 IRX3P78415 501 aaPredicted RBP18.08■□□□□ 0.48
TOM1-215ENST00000491987 ZYXQ15942 572 aaKnown RBP18.08■□□□□ 0.48
TOM1-215ENST00000491987 FAM110CQ1W6H9 321 aa18.08■□□□□ 0.48
TOM1-215ENST00000491987 FEZ1Q99689 392 aa18.08■□□□□ 0.48
TOM1-215ENST00000491987 TMEM106CQ9BVX2 250 aa18.08■□□□□ 0.48
TOM1-215ENST00000491987 CABP5Q9NP86 173 aa18.08■□□□□ 0.48
TOM1-215ENST00000491987 ATP8A2Q9NTI2 1148 aa18.08■□□□□ 0.48
TOM1-215ENST00000491987 GABRQQ9UN88 632 aa18.08■□□□□ 0.48
TOM1-215ENST00000491987 GRK4P32298 578 aa18.07■□□□□ 0.48
TOM1-215ENST00000491987 GCLCP48506 637 aaPredicted RBP18.07■□□□□ 0.48
TOM1-215ENST00000491987 KBTBD3Q8NAB2 608 aa18.07■□□□□ 0.48
TOM1-215ENST00000491987 PUS7LQ9H0K6 701 aaKnown RBP18.07■□□□□ 0.48
TOM1-215ENST00000491987 EMILIN3Q9NT22 766 aa18.07■□□□□ 0.48
TOM1-215ENST00000491987 SLC4A4Q9Y6R1 1079 aa18.07■□□□□ 0.48
TOM1-215ENST00000491987 MPHOSPH10O00566 681 aaKnown RBP18.06■□□□□ 0.48
TOM1-215ENST00000491987 EN2P19622 333 aaPredicted RBP18.06■□□□□ 0.48
TOM1-215ENST00000491987 HOXA7P31268 230 aaPredicted RBP18.06■□□□□ 0.48
TOM1-215ENST00000491987 USP17L2Q6R6M4 530 aa18.06■□□□□ 0.48
TOM1-215ENST00000491987 SLC44A5Q8NCS7 719 aa18.06■□□□□ 0.48
TOM1-215ENST00000491987 OTUD7AQ8TE49 926 aaPredicted RBP18.06■□□□□ 0.48
TOM1-215ENST00000491987 DYNLL2Q96FJ2 89 aa18.06■□□□□ 0.48
TOM1-215ENST00000491987 TTC41PQ6P2S7 1318 aa18.05■□□□□ 0.48
TOM1-215ENST00000491987 CENPFP49454 3210 aa18.05■□□□□ 0.48
TOM1-215ENST00000491987 CYP2D7A0A087X1C5 515 aa18.05■□□□□ 0.48
TOM1-215ENST00000491987 GUCY1A2P33402 732 aa18.05■□□□□ 0.48
TOM1-215ENST00000491987 FLT3LGP49771 235 aa18.05■□□□□ 0.48
TOM1-215ENST00000491987 SEPT2Q15019 361 aa18.05■□□□□ 0.48
TOM1-215ENST00000491987 ACER1Q8TDN7 264 aa18.05■□□□□ 0.48
TOM1-215ENST00000491987 DDRGK1Q96HY6 314 aa18.05■□□□□ 0.48
TOM1-215ENST00000491987 P2RX7Q99572 595 aaKnown RBP18.05■□□□□ 0.48
TOM1-215ENST00000491987 SWAP70Q9UH65 585 aa18.05■□□□□ 0.48
TOM1-215ENST00000491987 USP17L12C9JPN9 530 aa18.04■□□□□ 0.48
TOM1-215ENST00000491987 USP17L21D6R901 530 aa18.04■□□□□ 0.48
TOM1-215ENST00000491987 SMIM22K7EJ46 135 aa18.04■□□□□ 0.48
TOM1-215ENST00000491987 HERVK_113P62684 666 aa18.04■□□□□ 0.48
TOM1-215ENST00000491987 MTFR1Q15390 333 aa18.04■□□□□ 0.48
TOM1-215ENST00000491987 AMOTL1Q8IY63 956 aa18.04■□□□□ 0.48
TOM1-215ENST00000491987 PI4K2BQ8TCG2 481 aa18.04■□□□□ 0.48
TOM1-215ENST00000491987 COA7Q96BR5 231 aa18.04■□□□□ 0.48
TOM1-215ENST00000491987 C12orf42Q96LP6 360 aa18.04■□□□□ 0.48
TOM1-215ENST00000491987 KIAA1683Q9H0B3 1180 aa18.04■□□□□ 0.48
TOM1-215ENST00000491987 MORF4L1Q9UBU8 362 aa18.04■□□□□ 0.48
TOM1-215ENST00000491987 BIN2Q9UBW5 565 aaPredicted RBP18.04■□□□□ 0.48
TOM1-215ENST00000491987 TNRC18O15417 2968 aaPredicted RBP18.04■□□□□ 0.48
TOM1-215ENST00000491987 BAZ2AQ9UIF9 1905 aaKnown RBP18.04■□□□□ 0.48
TOM1-215ENST00000491987 ERC2O15083 957 aa18.03■□□□□ 0.48
TOM1-215ENST00000491987 RNF113AO15541 343 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms