RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 TRIM34Q9BYJ4 488 aa17.8■□□□□ 0.44
SSR4-212ENST00000491833 LRP2BPQ9P2M1 347 aa17.8■□□□□ 0.44
SSR4-212ENST00000491833 FRMPD3Q5JV73 1810 aa17.79■□□□□ 0.44
SSR4-212ENST00000491833 C19orf81C9J6K1 198 aa17.79■□□□□ 0.44
SSR4-212ENST00000491833 BAG3O95817 575 aa17.79■□□□□ 0.44
SSR4-212ENST00000491833 RGS2P41220 211 aa17.79■□□□□ 0.44
SSR4-212ENST00000491833 MCAMP43121 646 aa17.79■□□□□ 0.44
SSR4-212ENST00000491833 CCAR1Q8IX12 1150 aaKnown RBP17.79■□□□□ 0.44
SSR4-212ENST00000491833 CDCA7LQ96GN5 454 aa17.79■□□□□ 0.44
SSR4-212ENST00000491833 P2RX7Q99572 595 aaKnown RBP17.79■□□□□ 0.44
SSR4-212ENST00000491833 APBA2Q99767 749 aa17.79■□□□□ 0.44
SSR4-212ENST00000491833 TXNRD2Q9NNW7 524 aa17.79■□□□□ 0.44
SSR4-212ENST00000491833 GINM1Q9NU53 330 aa17.79■□□□□ 0.44
SSR4-212ENST00000491833 MTMR10Q9NXD2 777 aa17.79■□□□□ 0.44
SSR4-212ENST00000491833 AATFQ9NY61 560 aaKnown RBP eCLIP17.79■□□□□ 0.44
SSR4-212ENST00000491833 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.79■□□□□ 0.44
SSR4-212ENST00000491833 CDK5RAP2Q96SN8 1893 aa17.79■□□□□ 0.44
SSR4-212ENST00000491833 USP17L10C9JJH3 530 aa17.78■□□□□ 0.44
SSR4-212ENST00000491833 PEX10O60683 326 aa17.78■□□□□ 0.44
SSR4-212ENST00000491833 UQCRFS1P1P0C7P4 283 aa17.78■□□□□ 0.44
SSR4-212ENST00000491833 COL6A1P12109 1028 aa17.78■□□□□ 0.44
SSR4-212ENST00000491833 PLCG2P16885 1265 aa17.78■□□□□ 0.44
SSR4-212ENST00000491833 ERVK-9P63128 1117 aa17.78■□□□□ 0.44
SSR4-212ENST00000491833 ERVK-24P63145 666 aa17.78■□□□□ 0.44
SSR4-212ENST00000491833 CACNB2Q08289 660 aaPredicted RBP17.78■□□□□ 0.44
SSR4-212ENST00000491833 GPR142Q7Z601 462 aa17.78■□□□□ 0.44
SSR4-212ENST00000491833 CRACR2BQ8N4Y2 399 aaPredicted RBP17.78■□□□□ 0.44
SSR4-212ENST00000491833 DNAJC18Q9H819 358 aa17.78■□□□□ 0.44
SSR4-212ENST00000491833 CWC22Q9HCG8 908 aaKnown RBP17.78■□□□□ 0.44
SSR4-212ENST00000491833 FLT1P17948 1338 aa17.77■□□□□ 0.44
SSR4-212ENST00000491833 GDF11O95390 407 aa17.77■□□□□ 0.44
SSR4-212ENST00000491833 NAA16Q6N069 864 aaPredicted RBP17.77■□□□□ 0.44
SSR4-212ENST00000491833 MAPKAPK5Q8IW41 473 aa17.77■□□□□ 0.44
SSR4-212ENST00000491833 PAGR1Q9BTK6 254 aa17.77■□□□□ 0.44
SSR4-212ENST00000491833 ZBTB21Q9ULJ3 1066 aa17.77■□□□□ 0.44
SSR4-212ENST00000491833 CCER2I3L3R5 266 aa17.76■□□□□ 0.43
SSR4-212ENST00000491833 CCND3P30281 292 aaPredicted RBP17.76■□□□□ 0.43
SSR4-212ENST00000491833 LRRC26Q2I0M4 334 aa17.76■□□□□ 0.43
SSR4-212ENST00000491833 PLEKHH3Q7Z736 793 aa17.76■□□□□ 0.43
SSR4-212ENST00000491833 TGFBRAP1Q8WUH2 860 aa17.76■□□□□ 0.43
SSR4-212ENST00000491833 USP6NLQ92738 828 aa17.76■□□□□ 0.43
SSR4-212ENST00000491833 PORCNQ9H237 461 aa17.76■□□□□ 0.43
SSR4-212ENST00000491833 RBPJLQ9UBG7 517 aa17.76■□□□□ 0.43
SSR4-212ENST00000491833 HLA-DOAP06340 250 aa17.75■□□□□ 0.43
SSR4-212ENST00000491833 JAG1P78504 1218 aa17.75■□□□□ 0.43
SSR4-212ENST00000491833 G3BP1Q13283 466 aaKnown RBP eCLIP17.75■□□□□ 0.43
SSR4-212ENST00000491833 CCL14Q16627 93 aa17.75■□□□□ 0.43
SSR4-212ENST00000491833 MORN1Q5T089 497 aa17.75■□□□□ 0.43
SSR4-212ENST00000491833 LHX8Q68G74 356 aa17.75■□□□□ 0.43
SSR4-212ENST00000491833 METTL16Q86W50 562 aaKnown RBP17.75■□□□□ 0.43
SSR4-212ENST00000491833 FOXP4Q8IVH2 680 aaPredicted RBP17.75■□□□□ 0.43
SSR4-212ENST00000491833 TRMT2AQ8IZ69 625 aaKnown RBP17.75■□□□□ 0.43
SSR4-212ENST00000491833 MDM2Q00987 491 aaPredicted RBP17.74■□□□□ 0.43
SSR4-212ENST00000491833 SHROOM1Q2M3G4 852 aaPredicted RBP17.74■□□□□ 0.43
SSR4-212ENST00000491833 Q3C1V9 767 aa17.74■□□□□ 0.43
SSR4-212ENST00000491833 TTC39AQ5SRH9 613 aa17.74■□□□□ 0.43
SSR4-212ENST00000491833 ATF7IPQ6VMQ6 1270 aa17.74■□□□□ 0.43
SSR4-212ENST00000491833 ARHGAP45Q92619 1136 aa17.74■□□□□ 0.43
SSR4-212ENST00000491833 PPP4CP60510 307 aa17.73■□□□□ 0.43
SSR4-212ENST00000491833 MAP2K5Q13163 448 aa17.73■□□□□ 0.43
SSR4-212ENST00000491833 USP17L2Q6R6M4 530 aa17.73■□□□□ 0.43
SSR4-212ENST00000491833 SNRKQ9NRH2 765 aa17.73■□□□□ 0.43
SSR4-212ENST00000491833 PALD1Q9ULE6 856 aa17.73■□□□□ 0.43
SSR4-212ENST00000491833 GLRX3O76003 335 aaKnown RBP17.72■□□□□ 0.43
SSR4-212ENST00000491833 GNAI2P04899 355 aa17.72■□□□□ 0.43
SSR4-212ENST00000491833 RARSP54136 660 aaKnown RBP17.72■□□□□ 0.43
SSR4-212ENST00000491833 CCNA1P78396 465 aa17.72■□□□□ 0.43
SSR4-212ENST00000491833 CCDC158Q5M9N0 1113 aa17.72■□□□□ 0.43
SSR4-212ENST00000491833 ADGRA1Q86SQ6 560 aa17.72■□□□□ 0.43
SSR4-212ENST00000491833 MIER1Q8N108 512 aa17.72■□□□□ 0.43
SSR4-212ENST00000491833 FEZ1Q99689 392 aa17.72■□□□□ 0.43
SSR4-212ENST00000491833 EMILIN3Q9NT22 766 aa17.72■□□□□ 0.43
SSR4-212ENST00000491833 RABGAP1Q9Y3P9 1069 aa17.72■□□□□ 0.43
SSR4-212ENST00000491833 PNMA6EA0A0J9YXQ4 647 aa17.71■□□□□ 0.43
SSR4-212ENST00000491833 IGSF3O75054 1194 aa17.71■□□□□ 0.43
SSR4-212ENST00000491833 WDR78Q5VTH9 848 aa17.71■□□□□ 0.43
SSR4-212ENST00000491833 MFSD14CQ5VZR4 134 aa17.71■□□□□ 0.43
SSR4-212ENST00000491833 C12orf42Q96LP6 360 aa17.71■□□□□ 0.43
SSR4-212ENST00000491833 LBHD1Q9BQE6 289 aaPredicted RBP17.71■□□□□ 0.43
SSR4-212ENST00000491833 SAP30BPQ9UHR5 308 aaKnown RBP17.71■□□□□ 0.43
SSR4-212ENST00000491833 MYO5AQ9Y4I1 1855 aaKnown RBP17.7■□□□□ 0.42
SSR4-212ENST00000491833 MSCO60682 206 aa17.7■□□□□ 0.42
SSR4-212ENST00000491833 GH2P01242 217 aa17.7■□□□□ 0.42
SSR4-212ENST00000491833 ZYXQ15942 572 aaKnown RBP17.7■□□□□ 0.42
SSR4-212ENST00000491833 TNNI3KQ59H18 835 aa17.7■□□□□ 0.42
SSR4-212ENST00000491833 FAM109BQ6ICB4 259 aaPredicted RBP17.7■□□□□ 0.42
SSR4-212ENST00000491833 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.7■□□□□ 0.42
SSR4-212ENST00000491833 EDC3Q96F86 508 aaKnown RBP17.7■□□□□ 0.42
SSR4-212ENST00000491833 SENP6Q9GZR1 1112 aaPredicted RBP17.7■□□□□ 0.42
SSR4-212ENST00000491833 GPR108Q9NPR9 543 aa17.7■□□□□ 0.42
SSR4-212ENST00000491833 FPGT-TNNI3KV9GXZ4 949 aa17.7■□□□□ 0.42
SSR4-212ENST00000491833 CUL9Q8IWT3 2517 aa17.7■□□□□ 0.42
SSR4-212ENST00000491833 MYH1P12882 1939 aa17.7■□□□□ 0.42
SSR4-212ENST00000491833 LTBP2Q14767 1821 aa17.7■□□□□ 0.42
SSR4-212ENST00000491833 USP17L15C9J2P7 530 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 USP17L13C9JLJ4 530 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 USP17L11C9JVI0 530 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 USP17L18D6R9N7 530 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 USP17L22D6RA61 530 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 USP17L17D6RBQ6 530 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms