RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 GABPAQ06546 454 aa27.86■■■□□ 2.05
CPNE9-204ENST00000491802 SHROOM1Q2M3G4 852 aaPredicted RBP27.86■■■□□ 2.05
CPNE9-204ENST00000491802 TTC22Q5TAA0 569 aa27.86■■■□□ 2.05
CPNE9-204ENST00000491802 TATDN1Q6P1N9 297 aa27.86■■■□□ 2.05
CPNE9-204ENST00000491802 CCDC129Q6ZRS4 1044 aa27.86■■■□□ 2.05
CPNE9-204ENST00000491802 CCDC136Q96JN2 1154 aa27.86■■■□□ 2.05
CPNE9-204ENST00000491802 FAM227BQ96M60 508 aa27.86■■■□□ 2.05
CPNE9-204ENST00000491802 EPB41L4AQ9HCS5 686 aaPredicted RBP27.86■■■□□ 2.05
CPNE9-204ENST00000491802 ARPP21Q9UBL0 812 aaPredicted RBP27.86■■■□□ 2.05
CPNE9-204ENST00000491802 A0A0D9SFI3 127 aa27.85■■■□□ 2.05
CPNE9-204ENST00000491802 GPR25O00155 361 aa27.85■■■□□ 2.05
CPNE9-204ENST00000491802 GSPT1P15170 499 aaKnown RBP27.85■■■□□ 2.05
CPNE9-204ENST00000491802 SHMT1P34896 483 aa27.85■■■□□ 2.05
CPNE9-204ENST00000491802 MOGSQ13724 837 aa27.85■■■□□ 2.05
CPNE9-204ENST00000491802 C12orf60Q5U649 245 aa27.85■■■□□ 2.05
CPNE9-204ENST00000491802 GIMAP6Q6P9H5 292 aa27.85■■■□□ 2.05
CPNE9-204ENST00000491802 TNS4Q8IZW8 715 aa27.85■■■□□ 2.05
CPNE9-204ENST00000491802 ZBTB21Q9ULJ3 1066 aa27.85■■■□□ 2.05
CPNE9-204ENST00000491802 APPP05067 770 aa27.84■■■□□ 2.05
CPNE9-204ENST00000491802 ASNSP08243 561 aa27.84■■■□□ 2.05
CPNE9-204ENST00000491802 JAG1P78504 1218 aa27.84■■■□□ 2.05
CPNE9-204ENST00000491802 NMIQ13287 307 aaPredicted RBP27.84■■■□□ 2.05
CPNE9-204ENST00000491802 CTR9Q6PD62 1173 aa27.84■■■□□ 2.05
CPNE9-204ENST00000491802 FAM43AQ8N2R8 423 aa27.84■■■□□ 2.05
CPNE9-204ENST00000491802 SLC44A5Q8NCS7 719 aa27.84■■■□□ 2.05
CPNE9-204ENST00000491802 HELLSQ9NRZ9 838 aa27.84■■■□□ 2.05
CPNE9-204ENST00000491802 A0A0G2JLL6 359 aaPredicted RBP27.83■■■□□ 2.05
CPNE9-204ENST00000491802 TRIM75PA6NK02 468 aa27.83■■■□□ 2.05
CPNE9-204ENST00000491802 BTBD19C9JJ37 291 aa27.83■■■□□ 2.05
CPNE9-204ENST00000491802 SMIM22K7EJ46 135 aa27.83■■■□□ 2.05
CPNE9-204ENST00000491802 TDO2P48775 406 aa27.83■■■□□ 2.05
CPNE9-204ENST00000491802 PRRT2Q7Z6L0 340 aaPredicted RBP27.83■■■□□ 2.05
CPNE9-204ENST00000491802 ANKRD23Q86SG2 305 aa27.83■■■□□ 2.05
CPNE9-204ENST00000491802 DYNLL2Q96FJ2 89 aa27.83■■■□□ 2.05
CPNE9-204ENST00000491802 R3HDMLQ9H3Y0 253 aa27.83■■■□□ 2.05
CPNE9-204ENST00000491802 LOC285556D6RIA3 1793 aa27.82■■■□□ 2.04
CPNE9-204ENST00000491802 USP17L5A8MUK1 530 aa27.82■■■□□ 2.04
CPNE9-204ENST00000491802 PATL2C9JE40 543 aaKnown RBP27.82■■■□□ 2.04
CPNE9-204ENST00000491802 SDSP20132 328 aa27.82■■■□□ 2.04
CPNE9-204ENST00000491802 CRHR2Q13324 411 aa27.82■■■□□ 2.04
CPNE9-204ENST00000491802 CERKLQ49MI3 558 aaPredicted RBP27.82■■■□□ 2.04
CPNE9-204ENST00000491802 ZNF296Q8WUU4 475 aaPredicted RBP27.82■■■□□ 2.04
CPNE9-204ENST00000491802 SWAP70Q9UH65 585 aa27.82■■■□□ 2.04
CPNE9-204ENST00000491802 MYH8P13535 1937 aa27.81■■■□□ 2.04
CPNE9-204ENST00000491802 GH2P01242 217 aa27.81■■■□□ 2.04
CPNE9-204ENST00000491802 MCMDC2Q4G0Z9 681 aa27.81■■■□□ 2.04
CPNE9-204ENST00000491802 FASTKD5Q7L8L6 764 aaKnown RBP27.81■■■□□ 2.04
CPNE9-204ENST00000491802 NACAP1Q9BZK3 213 aa27.81■■■□□ 2.04
CPNE9-204ENST00000491802 TAF1CQ15572 869 aaPredicted RBP27.8■■■□□ 2.04
CPNE9-204ENST00000491802 SBK1Q52WX2 424 aa27.8■■■□□ 2.04
CPNE9-204ENST00000491802 IFNL3Q8IZI9 196 aa27.8■■■□□ 2.04
CPNE9-204ENST00000491802 ZNF280CQ8ND82 737 aa27.8■■■□□ 2.04
CPNE9-204ENST00000491802 WDR18Q9BV38 432 aa27.8■■■□□ 2.04
CPNE9-204ENST00000491802 AS3MTQ9HBK9 375 aa27.8■■■□□ 2.04
CPNE9-204ENST00000491802 ZFYVE28Q9HCC9 887 aa27.8■■■□□ 2.04
CPNE9-204ENST00000491802 DIAPH3Q9NSV4 1193 aa27.8■■■□□ 2.04
CPNE9-204ENST00000491802 FKTNO75072 461 aa27.79■■■□□ 2.04
CPNE9-204ENST00000491802 SPP2Q13103 211 aa27.79■■■□□ 2.04
CPNE9-204ENST00000491802 ABCB5Q2M3G0 1257 aa27.79■■■□□ 2.04
CPNE9-204ENST00000491802 C16orf86Q6ZW13 317 aa27.79■■■□□ 2.04
CPNE9-204ENST00000491802 SLC45A1Q9Y2W3 748 aa27.79■■■□□ 2.04
CPNE9-204ENST00000491802 ROBO3Q96MS0 1386 aa27.78■■■□□ 2.04
CPNE9-204ENST00000491802 MINDY4BA8MYZ0 360 aa27.78■■■□□ 2.04
CPNE9-204ENST00000491802 HIP1O00291 1037 aa27.78■■■□□ 2.04
CPNE9-204ENST00000491802 FOXP2O15409 715 aa27.78■■■□□ 2.04
CPNE9-204ENST00000491802 ZNF589Q86UQ0 364 aaPredicted RBP27.78■■■□□ 2.04
CPNE9-204ENST00000491802 NAPBQ9H115 298 aa27.78■■■□□ 2.04
CPNE9-204ENST00000491802 CCDC171Q6TFL3 1326 aa27.77■■■□□ 2.04
CPNE9-204ENST00000491802 VPS53Q5VIR6 699 aa27.77■■■□□ 2.04
CPNE9-204ENST00000491802 GPAT2Q6NUI2 795 aa27.77■■■□□ 2.04
CPNE9-204ENST00000491802 GADL1Q6ZQY3 521 aa27.77■■■□□ 2.04
CPNE9-204ENST00000491802 SKAP1Q86WV1 359 aa27.77■■■□□ 2.04
CPNE9-204ENST00000491802 CABP5Q9NP86 173 aa27.77■■■□□ 2.04
CPNE9-204ENST00000491802 TLR2O60603 784 aa27.76■■■□□ 2.03
CPNE9-204ENST00000491802 CDK8P49336 464 aa27.76■■■□□ 2.03
CPNE9-204ENST00000491802 RAB3GAP1Q15042 981 aa27.76■■■□□ 2.03
CPNE9-204ENST00000491802 SH3D19Q5HYK7 790 aa27.76■■■□□ 2.03
CPNE9-204ENST00000491802 CWC27Q6UX04 472 aaKnown RBP27.76■■■□□ 2.03
CPNE9-204ENST00000491802 PROCA1Q8NCQ7 364 aaPredicted RBP27.76■■■□□ 2.03
CPNE9-204ENST00000491802 PDHXO00330 501 aa27.75■■■□□ 2.03
CPNE9-204ENST00000491802 MPHOSPH10O00566 681 aaKnown RBP27.75■■■□□ 2.03
CPNE9-204ENST00000491802 MTMR2Q13614 643 aa27.75■■■□□ 2.03
CPNE9-204ENST00000491802 CTU1Q7Z7A3 348 aaKnown RBP27.75■■■□□ 2.03
CPNE9-204ENST00000491802 STK11IPQ8N1F8 1099 aa27.75■■■□□ 2.03
CPNE9-204ENST00000491802 ADGRA2Q96PE1 1338 aa27.73■■■□□ 2.03
CPNE9-204ENST00000491802 AKR1B1P15121 316 aa27.73■■■□□ 2.03
CPNE9-204ENST00000491802 HMGCS2P54868 508 aa27.73■■■□□ 2.03
CPNE9-204ENST00000491802 IFFO2Q5TF58 517 aa27.73■■■□□ 2.03
CPNE9-204ENST00000491802 AGTPBP1Q9UPW5 1226 aa27.73■■■□□ 2.03
CPNE9-204ENST00000491802 C19orf81C9J6K1 198 aa27.72■■■□□ 2.03
CPNE9-204ENST00000491802 GUCY1A2P33402 732 aa27.72■■■□□ 2.03
CPNE9-204ENST00000491802 MFAP1P55081 439 aaKnown RBP27.72■■■□□ 2.03
CPNE9-204ENST00000491802 BACE1P56817 501 aa27.72■■■□□ 2.03
CPNE9-204ENST00000491802 SP3Q02447 781 aa27.72■■■□□ 2.03
CPNE9-204ENST00000491802 DGKZQ13574 1117 aa27.72■■■□□ 2.03
CPNE9-204ENST00000491802 SEPT2Q15019 361 aa27.72■■■□□ 2.03
CPNE9-204ENST00000491802 PKN2Q16513 984 aaKnown RBP27.72■■■□□ 2.03
CPNE9-204ENST00000491802 TMEM179Q6ZVK1 233 aa27.72■■■□□ 2.03
CPNE9-204ENST00000491802 ERO1AQ96HE7 468 aa27.72■■■□□ 2.03
CPNE9-204ENST00000491802 PARK7Q99497 189 aaKnown RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms